RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 IL36AQ9UHA7 158 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 EGFL7Q9UHF1 273 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 OAZ3Q9UMX2 235 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 NAALAD2Q9Y3Q0 740 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 ANGPTL3Q9Y5C1 460 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 DGKBQ9Y6T7 804 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 PMF1-BGLAPU3KQ54 211 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 GON4LQ3T8J9 2241 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 BPTFQ12830 3046 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 TRBV5-3A0A0A0MS03 114 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 CCDC163A0A0D9SF12 145 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 DHRS12A0PJE2 317 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 EI24O14681 340 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 ASNA1O43681 348 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 IDH3BO43837 385 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 DEAF1O75398 565 aaPredicted RBP5.2□□□□□ -1.58
VPS41-203ENST00000395969 TPPPO94811 219 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 GABARAPO95166 117 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 IL33O95760 270 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 HTR1AP08908 422 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 CDH1P12830 882 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 TYRP14679 529 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 LHCGRP22888 699 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 CRHBPP24387 322 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 FASP25445 335 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 CD40LGP29965 261 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 CTNNB1P35222 781 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 SOX11P35716 441 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 HSD17B2P37059 387 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 CCR10P46092 362 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 P2RX3P56373 397 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 GABARAPL2P60520 117 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 MAXP61244 160 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 CLCQ05315 142 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 TRAF3Q13114 568 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 STK11Q15831 433 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 HIST2H2ACQ16777 129 aaPredicted RBP5.2□□□□□ -1.58
VPS41-203ENST00000395969 TTLL9Q3SXZ7 439 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 ARSIQ5FYB1 569 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 TBCELQ5QJ74 424 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 FAM109BQ6ICB4 259 aaPredicted RBP5.2□□□□□ -1.58
VPS41-203ENST00000395969 LCN8Q6JVE9 175 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 SLCO6A1Q86UG4 719 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 RALGPS2Q86X27 583 aaPredicted RBP5.2□□□□□ -1.58
VPS41-203ENST00000395969 ZNF687Q8N1G0 1237 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 AADATQ8N5Z0 425 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 OR56A3Q8NH54 315 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 PHF10Q8WUB8 498 aaKnown RBP5.2□□□□□ -1.58
VPS41-203ENST00000395969 ATL1Q8WXF7 558 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 VPS33AQ96AX1 596 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 RHBDF1Q96CC6 855 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 DTD2Q96FN9 168 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 NECTIN4Q96NY8 510 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 SNX18Q96RF0 628 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 TMEM121BQ9BXQ6 578 aaPredicted RBP5.2□□□□□ -1.58
VPS41-203ENST00000395969 TRIM54Q9BYV2 358 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 CLPBQ9H078 707 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 POMKQ9H5K3 350 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 CAB39LQ9H9S4 337 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 HPS4Q9NQG7 708 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 ZNF225Q9UK10 706 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 NUDT5Q9UKK9 219 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 CLEC4EQ9ULY5 219 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 NEUROG3Q9Y4Z2 214 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 DOCK8Q8NF50 2099 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 RNF103-CHMP3A0A140T963 221 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.2□□□□□ -1.58
VPS41-203ENST00000395969 TMEM238LA0A1B0GVL6 79 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.2□□□□□ -1.58
VPS41-203ENST00000395969 A0A1W2PRU2 124 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 NPIPB15A6NHN6 443 aaPredicted RBP5.2□□□□□ -1.58
VPS41-203ENST00000395969 CACNB4O00305 520 aaPredicted RBP5.2□□□□□ -1.58
VPS41-203ENST00000395969 AXIN1O15169 862 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 STX7O15400 261 aaKnown RBP5.2□□□□□ -1.58
VPS41-203ENST00000395969 TAPBPO15533 448 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 B4GAT1O43505 415 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 SMAD6O43541 496 aaKnown RBP5.2□□□□□ -1.58
VPS41-203ENST00000395969 TSPAN9O75954 239 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 FKBP9O95302 570 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 PRAMEF12O95522 483 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 SNAP29O95721 258 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 CEBPBP17676 345 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 PCMT1P22061 227 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 ACVR2AP27037 513 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 ELK4P28324 431 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 IFNA8P32881 189 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 RPS9P46781 194 aaKnown RBP5.2□□□□□ -1.58
VPS41-203ENST00000395969 CLK1P49759 484 aaKnown RBP5.2□□□□□ -1.58
VPS41-203ENST00000395969 PPP5CP53041 499 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 SLC12A2P55011 1212 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 SH3BP2P78314 561 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 CYP4F8P98187 520 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 CSTF3Q12996 717 aaKnown RBP5.2□□□□□ -1.58
VPS41-203ENST00000395969 MTAPQ13126 283 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 MAD2L1Q13257 205 aaPredicted RBP5.2□□□□□ -1.58
VPS41-203ENST00000395969 GALNT3Q14435 633 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 ELAVL3Q14576 367 aaKnown RBP5.2□□□□□ -1.58
VPS41-203ENST00000395969 TAF12Q16514 161 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 DPY19L1Q2PZI1 675 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 LIPJQ5W064 366 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms