RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 GhrlQ9EQX0 117 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Fkbp9Q9Z247 570 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Fam166bA2AIP0 273 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Itga8A2ARA8 1062 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Arhgap36B1AUC7 590 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Cyp2w1E9Q816 493 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Fbxw9F8VPX2 458 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Vmn2r2L7N2E9 908 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Sh3yl1O08641 340 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Vti1bO88384 232 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 TfamP40630 243 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Apobec1P51908 229 aaKnown RBP10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Nudt1P53368 156 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Hrh1P70174 488 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Neurog1P70660 244 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Smad5P97454 465 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Bpifa6Q0VGU8 367 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Cyb5r2Q3KNK3 276 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Pcdh19Q80TF3 1145 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Fndc11Q80WB0 326 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Elp6Q8BK75 266 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Tmem72Q8C3K5 275 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Pi4k2bQ8CBQ5 469 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Ifnl3Q8CGK6 193 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Kremen2Q8K1S7 461 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Dhrs7bQ99J47 323 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Olfr704Q9EPF6 315 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Nkx2-4Q9EQM3 354 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Gtf2h2Q9JIB4 396 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Enpp2Q9R1E6 862 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Phrf1A6H619 1682 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Rpl7a-ps3A0A140T8L1 270 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 1810010D01RikA0A1L1SR87 51 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Olfr376E9Q4M1 320 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Maml2F6U238 1170 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 FpgtG5E8F4 590 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Slc2a7P0C6A1 513 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 H2-Q7P14429 334 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 H2-Q9P14431 200 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Anxa6P14824 673 aaKnown RBP10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Pcsk2P21661 637 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Rpl10lP86048 214 aaKnown RBP10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Fam72aQ8BFZ8 149 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Prdm8Q8BZ97 687 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Csnk1g3Q8C4X2 424 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Vmn1r205Q8R276 316 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Kctd5Q8VC57 234 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 HpgdQ8VCC1 269 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Adgre4Q91ZE5 689 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Mtif3Q9CZD5 276 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Dkk3Q9QUN9 349 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Osbpl10S4R1M9 766 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Tmem265E9Q8G3 109 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Spdye4cI6XKQ3 339 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Clk4O35493 481 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Lgals7O54974 136 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Prf1P10820 554 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Hmga1P17095 107 aaKnown RBP10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 BdnfP21237 249 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Atp6v1e1P50518 226 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 IhhP97812 411 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 March5Q3KNM2 278 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Ccdc177Q3UHB8 706 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Naf1Q3UMQ8 489 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Eri2Q5BKS4 688 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Igfbp7Q61581 281 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Vat1Q62465 406 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Commd7Q8BG94 200 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Adgrg7Q8BM96 785 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Arhgap12Q8C0D4 838 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Ccdc59Q8R2N0 240 aaKnown RBP10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Cd207Q8VBX4 331 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Bbox1Q924Y0 387 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Nrg4Q9WTX4 115 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Rfc2Q9WUK4 349 aaKnown RBP10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Ring1O35730 406 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Ldb2O55203 373 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Gon7P0C8B4 98 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 CtswP56203 371 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Aqp8P56404 261 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 MtpnP62774 118 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Smu1Q3UKJ7 513 aaKnown RBP10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 PkdccQ5RJI4 492 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 BC061212Q6P8K3 481 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 B3gnt5Q8BGY6 376 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Rnf38Q8BI21 518 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Ncs1Q8BNY6 190 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Slc35b4Q8CIA5 331 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Fbxl8Q8CIG9 374 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Zbtb6Q8K088 423 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Nprl3Q8VIJ8 569 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 ApofQ91V80 315 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Ppp6cQ9CQR6 305 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Dhrs7Q9CXR1 338 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Cacna1fQ9JIS7 1985 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Vmn2r22E9Q7S8 853 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Zfp607bG3X9H3 648 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Gm21738J3QP72 227 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Gm21915J3QPM7 133 aa10.6□□□□□ -0.71
Msh3-201ENSMUST00000022220 Hps1O08983 704 aa10.6□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms