Protein–RNA interactions for Protein: A0A1L1SR87

1810010D01Rik, RIKEN cDNA 1810010D01 gene, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1810010D01RikA0A1L1SR87 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
1810010D01RikA0A1L1SR87 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
1810010D01RikA0A1L1SR87 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
1810010D01RikA0A1L1SR87 Gm25239-201ENSMUST00000174915 86 ntBASIC31.19■■■□□ 2.58
1810010D01RikA0A1L1SR87 Psd-208ENSMUST00000224556 2034 ntBASIC30.71■■■□□ 2.51
1810010D01RikA0A1L1SR87 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
1810010D01RikA0A1L1SR87 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
1810010D01RikA0A1L1SR87 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
1810010D01RikA0A1L1SR87 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
1810010D01RikA0A1L1SR87 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
1810010D01RikA0A1L1SR87 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
1810010D01RikA0A1L1SR87 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
1810010D01RikA0A1L1SR87 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
1810010D01RikA0A1L1SR87 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
1810010D01RikA0A1L1SR87 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
1810010D01RikA0A1L1SR87 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
1810010D01RikA0A1L1SR87 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.64■■■□□ 2.18
1810010D01RikA0A1L1SR87 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
1810010D01RikA0A1L1SR87 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
1810010D01RikA0A1L1SR87 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
1810010D01RikA0A1L1SR87 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
1810010D01RikA0A1L1SR87 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
1810010D01RikA0A1L1SR87 Gm15042-201ENSMUST00000120212 883 ntBASIC28.28■■■□□ 2.12
1810010D01RikA0A1L1SR87 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
1810010D01RikA0A1L1SR87 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
1810010D01RikA0A1L1SR87 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
1810010D01RikA0A1L1SR87 Gm15045-201ENSMUST00000117359 883 ntBASIC27.9■■■□□ 2.06
1810010D01RikA0A1L1SR87 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.88■■■□□ 2.05
1810010D01RikA0A1L1SR87 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
1810010D01RikA0A1L1SR87 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
1810010D01RikA0A1L1SR87 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
1810010D01RikA0A1L1SR87 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
1810010D01RikA0A1L1SR87 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.68■■■□□ 2.02
1810010D01RikA0A1L1SR87 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.68■■■□□ 2.02
1810010D01RikA0A1L1SR87 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.62■■■□□ 2.01
1810010D01RikA0A1L1SR87 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.62■■■□□ 2.01
1810010D01RikA0A1L1SR87 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
1810010D01RikA0A1L1SR87 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.55■■■□□ 2
1810010D01RikA0A1L1SR87 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
1810010D01RikA0A1L1SR87 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
1810010D01RikA0A1L1SR87 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.47■■□□□ 1.99
1810010D01RikA0A1L1SR87 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
1810010D01RikA0A1L1SR87 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
1810010D01RikA0A1L1SR87 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
1810010D01RikA0A1L1SR87 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
1810010D01RikA0A1L1SR87 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
1810010D01RikA0A1L1SR87 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
1810010D01RikA0A1L1SR87 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
1810010D01RikA0A1L1SR87 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
1810010D01RikA0A1L1SR87 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
1810010D01RikA0A1L1SR87 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
1810010D01RikA0A1L1SR87 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.09■■□□□ 1.93
1810010D01RikA0A1L1SR87 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
1810010D01RikA0A1L1SR87 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
1810010D01RikA0A1L1SR87 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.86■■□□□ 1.89
1810010D01RikA0A1L1SR87 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
1810010D01RikA0A1L1SR87 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
1810010D01RikA0A1L1SR87 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
1810010D01RikA0A1L1SR87 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
1810010D01RikA0A1L1SR87 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
1810010D01RikA0A1L1SR87 Gm24109-201ENSMUST00000175489 103 ntBASIC26.61■■□□□ 1.85
1810010D01RikA0A1L1SR87 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
1810010D01RikA0A1L1SR87 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
1810010D01RikA0A1L1SR87 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.57■■□□□ 1.84
1810010D01RikA0A1L1SR87 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
1810010D01RikA0A1L1SR87 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
1810010D01RikA0A1L1SR87 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
1810010D01RikA0A1L1SR87 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
1810010D01RikA0A1L1SR87 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
1810010D01RikA0A1L1SR87 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
1810010D01RikA0A1L1SR87 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
1810010D01RikA0A1L1SR87 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
1810010D01RikA0A1L1SR87 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
1810010D01RikA0A1L1SR87 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
1810010D01RikA0A1L1SR87 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
1810010D01RikA0A1L1SR87 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
1810010D01RikA0A1L1SR87 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
1810010D01RikA0A1L1SR87 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
1810010D01RikA0A1L1SR87 Gm23366-201ENSMUST00000175022 89 ntBASIC26.15■■□□□ 1.78
1810010D01RikA0A1L1SR87 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
1810010D01RikA0A1L1SR87 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
1810010D01RikA0A1L1SR87 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
1810010D01RikA0A1L1SR87 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.09■■□□□ 1.77
1810010D01RikA0A1L1SR87 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
1810010D01RikA0A1L1SR87 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
1810010D01RikA0A1L1SR87 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
1810010D01RikA0A1L1SR87 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
1810010D01RikA0A1L1SR87 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.97■■□□□ 1.75
1810010D01RikA0A1L1SR87 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
1810010D01RikA0A1L1SR87 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
1810010D01RikA0A1L1SR87 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
1810010D01RikA0A1L1SR87 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
1810010D01RikA0A1L1SR87 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.88■■□□□ 1.73
1810010D01RikA0A1L1SR87 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
1810010D01RikA0A1L1SR87 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
1810010D01RikA0A1L1SR87 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
1810010D01RikA0A1L1SR87 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.83■■□□□ 1.73
1810010D01RikA0A1L1SR87 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
1810010D01RikA0A1L1SR87 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
1810010D01RikA0A1L1SR87 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms