Protein–RNA interactions for Protein: Q8C4X2

Csnk1g3, Casein kinase I isoform gamma-3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1g3Q8C4X2 Gm25239-201ENSMUST00000174915 86 ntBASIC41,65■■■■■ 4,26
Csnk1g3Q8C4X2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38,54■■■■□ 3,76
Csnk1g3Q8C4X2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC38,03■■■■□ 3,68
Csnk1g3Q8C4X2 Gm15042-201ENSMUST00000120212 883 ntBASIC36,29■■■■□ 3,4
Csnk1g3Q8C4X2 Gm24109-201ENSMUST00000175489 103 ntBASIC36,14■■■■□ 3,38
Csnk1g3Q8C4X2 Gm15045-201ENSMUST00000117359 883 ntBASIC35,48■■■■□ 3,27
Csnk1g3Q8C4X2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35,25■■■■□ 3,23
Csnk1g3Q8C4X2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35,19■■■■□ 3,22
Csnk1g3Q8C4X2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35,01■■■■□ 3,2
Csnk1g3Q8C4X2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3,19
Csnk1g3Q8C4X2 Gm23366-201ENSMUST00000175022 89 ntBASIC34,78■■■■□ 3,16
Csnk1g3Q8C4X2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34,61■■■■□ 3,13
Csnk1g3Q8C4X2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34,53■■■■□ 3,12
Csnk1g3Q8C4X2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33,94■■■■□ 3,02
Csnk1g3Q8C4X2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33,91■■■■□ 3,02
Csnk1g3Q8C4X2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33,72■■■□□ 2,99
Csnk1g3Q8C4X2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33,57■■■□□ 2,96
Csnk1g3Q8C4X2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33,47■■■□□ 2,95
Csnk1g3Q8C4X2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33,38■■■□□ 2,93
Csnk1g3Q8C4X2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33,33■■■□□ 2,93
Csnk1g3Q8C4X2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33,32■■■□□ 2,92
Csnk1g3Q8C4X2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33,28■■■□□ 2,92
Csnk1g3Q8C4X2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33,27■■■□□ 2,92
Csnk1g3Q8C4X2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33,15■■■□□ 2,9
Csnk1g3Q8C4X2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC33,06■■■□□ 2,88
Csnk1g3Q8C4X2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33,03■■■□□ 2,88
Csnk1g3Q8C4X2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32,97■■■□□ 2,87
Csnk1g3Q8C4X2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32,92■■■□□ 2,86
Csnk1g3Q8C4X2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32,92■■■□□ 2,86
Csnk1g3Q8C4X2 Gm25238-201ENSMUST00000174914 89 ntBASIC32,91■■■□□ 2,86
Csnk1g3Q8C4X2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32,82■■■□□ 2,84
Csnk1g3Q8C4X2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32,81■■■□□ 2,84
Csnk1g3Q8C4X2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32,66■■■□□ 2,82
Csnk1g3Q8C4X2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32,64■■■□□ 2,82
Csnk1g3Q8C4X2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32,43■■■□□ 2,78
Csnk1g3Q8C4X2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32,32■■■□□ 2,76
Csnk1g3Q8C4X2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32,24■■■□□ 2,75
Csnk1g3Q8C4X2 Psd-208ENSMUST00000224556 2034 ntBASIC32,1■■■□□ 2,73
Csnk1g3Q8C4X2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32,05■■■□□ 2,72
Csnk1g3Q8C4X2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32,05■■■□□ 2,72
Csnk1g3Q8C4X2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32,05■■■□□ 2,72
Csnk1g3Q8C4X2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31,99■■■□□ 2,71
Csnk1g3Q8C4X2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31,95■■■□□ 2,7
Csnk1g3Q8C4X2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31,94■■■□□ 2,7
Csnk1g3Q8C4X2 Gm27325-201ENSMUST00000175467 74 ntBASIC31,81■■■□□ 2,68
Csnk1g3Q8C4X2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31,68■■■□□ 2,66
Csnk1g3Q8C4X2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31,67■■■□□ 2,66
Csnk1g3Q8C4X2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31,6■■■□□ 2,65
Csnk1g3Q8C4X2 Gm25262-201ENSMUST00000174934 133 ntBASIC31,59■■■□□ 2,65
Csnk1g3Q8C4X2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31,44■■■□□ 2,62
Csnk1g3Q8C4X2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31,42■■■□□ 2,62
Csnk1g3Q8C4X2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31,33■■■□□ 2,61
Csnk1g3Q8C4X2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31,32■■■□□ 2,6
Csnk1g3Q8C4X2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31,3■■■□□ 2,6
Csnk1g3Q8C4X2 Rab21-202ENSMUST00000218831 843 ntBASIC31,3■■■□□ 2,6
Csnk1g3Q8C4X2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31,24■■■□□ 2,59
Csnk1g3Q8C4X2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31,22■■■□□ 2,59
Csnk1g3Q8C4X2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31,15■■■□□ 2,58
Csnk1g3Q8C4X2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31,13■■■□□ 2,57
Csnk1g3Q8C4X2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31,08■■■□□ 2,57
Csnk1g3Q8C4X2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31,05■■■□□ 2,56
Csnk1g3Q8C4X2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30,98■■■□□ 2,55
Csnk1g3Q8C4X2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30,97■■■□□ 2,55
Csnk1g3Q8C4X2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30,96■■■□□ 2,55
Csnk1g3Q8C4X2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30,94■■■□□ 2,54
Csnk1g3Q8C4X2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30,94■■■□□ 2,54
Csnk1g3Q8C4X2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30,9■■■□□ 2,54
Csnk1g3Q8C4X2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30,88■■■□□ 2,53
Csnk1g3Q8C4X2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30,86■■■□□ 2,53
Csnk1g3Q8C4X2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30,85■■■□□ 2,53
Csnk1g3Q8C4X2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30,84■■■□□ 2,53
Csnk1g3Q8C4X2 Gm26115-201ENSMUST00000175605 87 ntBASIC30,84■■■□□ 2,53
Csnk1g3Q8C4X2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30,74■■■□□ 2,51
Csnk1g3Q8C4X2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30,73■■■□□ 2,51
Csnk1g3Q8C4X2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30,72■■■□□ 2,51
Csnk1g3Q8C4X2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30,71■■■□□ 2,51
Csnk1g3Q8C4X2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30,69■■■□□ 2,5
Csnk1g3Q8C4X2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30,65■■■□□ 2,5
Csnk1g3Q8C4X2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30,63■■■□□ 2,49
Csnk1g3Q8C4X2 Gm8109-201ENSMUST00000194076 746 ntBASIC30,63■■■□□ 2,49
Csnk1g3Q8C4X2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30,62■■■□□ 2,49
Csnk1g3Q8C4X2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30,54■■■□□ 2,48
Csnk1g3Q8C4X2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30,53■■■□□ 2,48
Csnk1g3Q8C4X2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30,5■■■□□ 2,47
Csnk1g3Q8C4X2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30,48■■■□□ 2,47
Csnk1g3Q8C4X2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30,47■■■□□ 2,47
Csnk1g3Q8C4X2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30,46■■■□□ 2,47
Csnk1g3Q8C4X2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30,45■■■□□ 2,47
Csnk1g3Q8C4X2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30,44■■■□□ 2,46
Csnk1g3Q8C4X2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30,44■■■□□ 2,46
Csnk1g3Q8C4X2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30,42■■■□□ 2,46
Csnk1g3Q8C4X2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30,38■■■□□ 2,45
Csnk1g3Q8C4X2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30,33■■■□□ 2,45
Csnk1g3Q8C4X2 Gm10524-201ENSMUST00000181931 1893 ntBASIC30,33■■■□□ 2,45
Csnk1g3Q8C4X2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30,28■■■□□ 2,44
Csnk1g3Q8C4X2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30,22■■■□□ 2,43
Csnk1g3Q8C4X2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30,21■■■□□ 2,43
Csnk1g3Q8C4X2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30,2■■■□□ 2,43
Csnk1g3Q8C4X2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30,19■■■□□ 2,42
Csnk1g3Q8C4X2 Gm17082-201ENSMUST00000166043 1091 ntBASIC30,18■■■□□ 2,42
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms