Protein–RNA interactions for Protein: P97454

Smad5, Mothers against decapentaplegic homolog 5, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad5P97454 Gm25239-201ENSMUST00000174915 86 ntBASIC35.65■■■■□ 3.3
Smad5P97454 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
Smad5P97454 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Smad5P97454 Gm15042-201ENSMUST00000120212 883 ntBASIC31■■■□□ 2.55
Smad5P97454 Gm24109-201ENSMUST00000175489 103 ntBASIC30.96■■■□□ 2.55
Smad5P97454 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Smad5P97454 Gm15045-201ENSMUST00000117359 883 ntBASIC30.27■■■□□ 2.44
Smad5P97454 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Smad5P97454 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Smad5P97454 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Smad5P97454 Gm23366-201ENSMUST00000175022 89 ntBASIC29.78■■■□□ 2.36
Smad5P97454 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Smad5P97454 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Smad5P97454 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.28
Smad5P97454 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Smad5P97454 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.93■■■□□ 2.22
Smad5P97454 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
Smad5P97454 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.68■■■□□ 2.18
Smad5P97454 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.66■■■□□ 2.18
Smad5P97454 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Smad5P97454 Psd-208ENSMUST00000224556 2034 ntBASIC28.54■■■□□ 2.16
Smad5P97454 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Smad5P97454 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Smad5P97454 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Smad5P97454 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Smad5P97454 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Smad5P97454 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.25■■■□□ 2.11
Smad5P97454 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.2■■■□□ 2.1
Smad5P97454 Gm25238-201ENSMUST00000174914 89 ntBASIC28.19■■■□□ 2.1
Smad5P97454 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Smad5P97454 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Smad5P97454 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Smad5P97454 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Smad5P97454 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
Smad5P97454 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
Smad5P97454 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.71■■■□□ 2.03
Smad5P97454 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
Smad5P97454 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.69■■■□□ 2.02
Smad5P97454 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Smad5P97454 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Smad5P97454 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.42■■□□□ 1.98
Smad5P97454 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
Smad5P97454 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Smad5P97454 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.36■■□□□ 1.97
Smad5P97454 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Smad5P97454 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Smad5P97454 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Smad5P97454 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Smad5P97454 Gm27325-201ENSMUST00000175467 74 ntBASIC27.14■■□□□ 1.94
Smad5P97454 Gm25262-201ENSMUST00000174934 133 ntBASIC27.13■■□□□ 1.93
Smad5P97454 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.11■■□□□ 1.93
Smad5P97454 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.11■■□□□ 1.93
Smad5P97454 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Smad5P97454 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Smad5P97454 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Smad5P97454 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Smad5P97454 Rab21-202ENSMUST00000218831 843 ntBASIC26.78■■□□□ 1.88
Smad5P97454 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26.77■■□□□ 1.88
Smad5P97454 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Smad5P97454 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Smad5P97454 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.72■■□□□ 1.87
Smad5P97454 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Smad5P97454 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.63■■□□□ 1.85
Smad5P97454 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.62■■□□□ 1.85
Smad5P97454 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.62■■□□□ 1.85
Smad5P97454 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Smad5P97454 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
Smad5P97454 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Smad5P97454 Gm26115-201ENSMUST00000175605 87 ntBASIC26.53■■□□□ 1.84
Smad5P97454 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Smad5P97454 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Smad5P97454 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Smad5P97454 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Smad5P97454 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.37■■□□□ 1.81
Smad5P97454 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Smad5P97454 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.35■■□□□ 1.81
Smad5P97454 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Smad5P97454 Gm8109-201ENSMUST00000194076 746 ntBASIC26.32■■□□□ 1.8
Smad5P97454 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.29■■□□□ 1.8
Smad5P97454 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.28■■□□□ 1.8
Smad5P97454 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Smad5P97454 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Smad5P97454 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Smad5P97454 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Smad5P97454 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.23■■□□□ 1.79
Smad5P97454 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Smad5P97454 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Smad5P97454 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Smad5P97454 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Smad5P97454 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26.17■■□□□ 1.78
Smad5P97454 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Smad5P97454 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Smad5P97454 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Smad5P97454 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
Smad5P97454 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Smad5P97454 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Smad5P97454 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.93■■□□□ 1.74
Smad5P97454 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.89■■□□□ 1.74
Smad5P97454 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Smad5P97454 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms