RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 CSNK1EP49674 416 aaKnown RBP5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 CLCNKAP51800 687 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 HK3P52790 923 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 ATXN3P54252 364 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 CLDN2P57739 230 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 SRP54P61011 504 aaKnown RBP5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 CRADDP78560 199 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 MGAT5Q09328 741 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 SLC14A1Q13336 389 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 SPIDRQ14159 915 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 TRIM25Q14258 630 aaKnown RBP5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 FZD2Q14332 565 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 ODF1Q14990 250 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 TRADDQ15628 312 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 TYSND1Q2T9J0 566 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 BCL7AQ4VC05 210 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 GPRC6AQ5T6X5 926 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 ALS2CLQ60I27 953 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 LVRNQ6Q4G3 990 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 ENPP7Q6UWV6 458 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 RFLNAQ6ZTI6 216 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 TAS2R42Q7RTR8 314 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 ADGRG6Q86SQ4 1221 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 LRRTM4Q86VH4 590 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 KCNMB4Q86W47 210 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 SERPINA9Q86WD7 417 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 CCDC25Q86WR0 208 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 CDYL2Q8N8U2 506 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 JPH3Q8WXH2 748 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 JADE3Q92613 823 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 CERS2Q96G23 380 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 PKNOX2Q96KN3 472 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 LINC00615Q96LM1 132 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 PANX3Q96QZ0 392 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 CYTH2Q99418 400 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 AGAP2Q99490 1192 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 CCDC77Q9BR77 488 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 TIMM29Q9BSF4 260 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 MEGF9Q9H1U4 602 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 SUDS3Q9H7L9 328 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 PPCSQ9HAB8 311 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 FZD3Q9NPG1 666 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 C20orf96Q9NUD7 363 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 SPASTQ9UBP0 616 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 KLQ9UEF7 1012 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 FETUBQ9UGM5 382 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 SLC2A6Q9UGQ3 507 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 PRSS50Q9UI38 385 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 GNPTGQ9UJJ9 305 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 NFU1Q9UMS0 254 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 OR1A2Q9Y585 309 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 CSNK1G3Q9Y6M4 447 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 PCDH15Q96QU1 1955 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 LRP4O75096 1905 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 USP34Q70CQ2 3546 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 A0A087WUV0 522 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 A0A1B0GTQ1 180 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 A0A1B0GVT2 93 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 MGAT4DA6NG13 374 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 TMEM202A6NGA9 273 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 FAM159BA6NKW6 160 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 INPP4BO15327 924 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 GPR42O15529 346 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 CTIFO43310 598 aaKnown RBP5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 GRID2O43424 1007 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 UGT1A9O60656 530 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 FTH1P02794 183 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 LPLP06858 475 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 CELA3BP08861 270 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 OR56A5P0C7T3 313 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 ALPPL2P10696 532 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 CTSEP14091 401 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 SLC2A4P14672 509 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 UGT1A6P19224 532 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 UGT1A1P22309 533 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 UGT1A4P22310 534 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 AKT1P31749 480 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 UGT1A3P35503 534 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 UGT1A5P35504 534 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 SKIV2L2P42285 1042 aaKnown RBP5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 PRLHRP49683 370 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 CCT8P50990 548 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 LIMK1P53667 647 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 PMS2P54278 862 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 CSE1LP55060 971 aaKnown RBP5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 IRX4P78413 519 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 PLP2Q04941 152 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 DMPKQ09013 629 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 ILF3Q12906 894 aaKnown RBP eCLIP5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 GRIK2Q13002 908 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 EIF2B5Q13144 721 aaKnown RBP5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 RPA4Q13156 261 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 USP10Q14694 798 aaKnown RBP5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 PTPRCAPQ14761 206 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 FASTKD3Q14CZ7 662 aaKnown RBP5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 BRD3Q15059 726 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 ELOCQ15369 112 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 LPAL2Q16609 132 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 ERCC6LQ2NKX8 1250 aa5.37□□□□□ -1.55
HMGB1P44-201ENST00000508597 KIF19Q2TAC6 998 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms