RNA–Protein interactions for RNA: snR41

snR41, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR41, Length 95 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR41	snR41	RPS13	P05756	151 aa	Known RBP	4.67	□□□□□ -1.66
snR41	snR41	MKK2	P32491	506 aa		4.67	□□□□□ -1.66
snR41	snR41	SEC8	P32855	1065 aa		4.67	□□□□□ -1.66
snR41	snR41	SEC26	P41810	973 aa	Known RBP	4.67	□□□□□ -1.66
snR41	snR41	YDR132C	Q03900	495 aa		4.67	□□□□□ -1.66
snR41	snR41	RRP15	Q06511	250 aa	Predicted RBP	4.67	□□□□□ -1.66
snR41	snR41	ABZ1	P37254	787 aa	Predicted RBP	4.66	□□□□□ -1.66
snR41	snR41	RGD1	P38339	666 aa		4.66	□□□□□ -1.66
snR41	snR41	GPB2	P39717	880 aa		4.66	□□□□□ -1.66
snR41	snR41	RPS26A	P39938	119 aa	Known RBP	4.66	□□□□□ -1.66
snR41	snR41	RPS26B	P39939	119 aa	Known RBP	4.66	□□□□□ -1.66
snR41	snR41	HNT2	P49775	206 aa		4.66	□□□□□ -1.66
snR41	snR41	RAT1	Q02792	1006 aa	Known RBP	4.66	□□□□□ -1.66
snR41	snR41	SPO21	Q12411	609 aa		4.66	□□□□□ -1.66
snR41	snR41	DED1	P06634	604 aa	Known RBP	4.65	□□□□□ -1.67
snR41	snR41	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
snR41	snR41	MGE1	P38523	228 aa		4.65	□□□□□ -1.67
snR41	snR41	NOP8	Q08287	484 aa	Predicted RBP	4.65	□□□□□ -1.67
snR41	snR41	GCR1	P07261	785 aa		4.64	□□□□□ -1.67
snR41	snR41	ATE1	P16639	503 aa		4.64	□□□□□ -1.67
snR41	snR41	TOD6	P34219	525 aa		4.64	□□□□□ -1.67
snR41	snR41	POL32	P47110	350 aa		4.64	□□□□□ -1.67
snR41	snR41	SGD1	Q06132	899 aa		4.64	□□□□□ -1.67
snR41	snR41	DBP5	P20449	482 aa	Known RBP	4.63	□□□□□ -1.67
snR41	snR41	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
snR41	snR41	SYP1	P25623	870 aa	Known RBP	4.63	□□□□□ -1.67
snR41	snR41	MCM2	P29469	868 aa		4.63	□□□□□ -1.67
snR41	snR41	LAM1	P38851	1228 aa		4.63	□□□□□ -1.67
snR41	snR41	RSB1	Q08417	382 aa		4.63	□□□□□ -1.67
snR41	snR41	YLR358C	O13565	187 aa		4.62	□□□□□ -1.67
snR41	snR41	MEF2	P39677	819 aa		4.62	□□□□□ -1.67
snR41	snR41	MPH1	P40562	993 aa		4.62	□□□□□ -1.67
snR41	snR41	CNN1	P43618	361 aa		4.62	□□□□□ -1.67
snR41	snR41	GCN5	Q03330	439 aa		4.62	□□□□□ -1.67
snR41	snR41	CLU1	Q03690	1277 aa	Known RBP	4.62	□□□□□ -1.67
snR41	snR41	YER152C	P10356	443 aa		4.61	□□□□□ -1.67
snR41	snR41	HEM3	P28789	327 aa		4.61	□□□□□ -1.67
snR41	snR41	DOM34	P33309	386 aa		4.61	□□□□□ -1.67
snR41	snR41	FYV10	P40492	516 aa		4.61	□□□□□ -1.67
snR41	snR41	YML020W	Q03722	664 aa		4.61	□□□□□ -1.67
snR41	snR41	DUS4	Q06063	367 aa		4.61	□□□□□ -1.67
snR41	snR41	ATG13	Q06628	738 aa		4.61	□□□□□ -1.67
snR41	snR41	MRL1	Q06815	381 aa		4.61	□□□□□ -1.67
snR41	snR41	CYC1	P00044	109 aa	Predicted RBP	4.6	□□□□□ -1.67
snR41	snR41	MLS1	P30952	554 aa		4.6	□□□□□ -1.67
snR41	snR41	RMD1	Q03441	430 aa		4.6	□□□□□ -1.67
snR41	snR41	PLB2	Q03674	706 aa		4.6	□□□□□ -1.67
snR41	snR41	SPR28	Q04921	423 aa		4.6	□□□□□ -1.67
snR41	snR41	ESF1	Q06344	628 aa	Known RBP	4.6	□□□□□ -1.67
snR41	snR41	SRM1	P21827	482 aa		4.59	□□□□□ -1.67
snR41	snR41	RER2	P35196	286 aa		4.59	□□□□□ -1.67
snR41	snR41	YFL054C	P43549	646 aa		4.59	□□□□□ -1.67
snR41	snR41	YOR352W	Q08816	343 aa		4.59	□□□□□ -1.67
snR41	snR41	RIB2	Q12362	591 aa	Known RBP	4.59	□□□□□ -1.67
snR41	snR41	RFC5	P38251	354 aa		4.58	□□□□□ -1.68
snR41	snR41	RSM24	Q03976	319 aa		4.58	□□□□□ -1.68
snR41	snR41	SIZ1	Q04195	904 aa		4.58	□□□□□ -1.68
snR41	snR41	GSF2	Q04697	403 aa	Known RBP	4.58	□□□□□ -1.68
snR41	snR41	RTT10	Q08924	1013 aa		4.58	□□□□□ -1.68
snR41	snR41	RAD27	P26793	382 aa		4.57	□□□□□ -1.68
snR41	snR41	CTS1	P29029	562 aa		4.57	□□□□□ -1.68
snR41	snR41	TAT2	P38967	592 aa		4.57	□□□□□ -1.68
snR41	snR41	SPT20	P50875	604 aa		4.57	□□□□□ -1.68
snR41	snR41	TIF35	Q04067	274 aa	Known RBP	4.57	□□□□□ -1.68
snR41	snR41	TMA46	Q12000	345 aa	Known RBP	4.57	□□□□□ -1.68
snR41	snR41	GNT1	Q12096	491 aa		4.57	□□□□□ -1.68
snR41	snR41	GAL10	P04397	699 aa		4.56	□□□□□ -1.68
snR41	snR41	CDC6	P09119	513 aa		4.56	□□□□□ -1.68
snR41	snR41	ASF1	P32447	279 aa		4.56	□□□□□ -1.68
snR41	snR41	DUT1	P33317	147 aa		4.56	□□□□□ -1.68
snR41	snR41	SVS1	Q12254	260 aa		4.56	□□□□□ -1.68
snR41	snR41	KIN2	P13186	1147 aa	Known RBP	4.55	□□□□□ -1.68
snR41	snR41	CDC20	P26309	610 aa		4.55	□□□□□ -1.68
snR41	snR41	SHM2	P37291	469 aa	Known RBP	4.55	□□□□□ -1.68
snR41	snR41	ROT1	Q03691	256 aa		4.55	□□□□□ -1.68
snR41	snR41	CMP2	P14747	604 aa		4.54	□□□□□ -1.68
snR41	snR41	ACE2	P21192	770 aa		4.54	□□□□□ -1.68
snR41	snR41	BAS1	P22035	811 aa		4.54	□□□□□ -1.68
snR41	snR41	PNT1	P38969	423 aa		4.54	□□□□□ -1.68
snR41	snR41	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
snR41	snR41	GEM1	P39722	662 aa		4.54	□□□□□ -1.68
snR41	snR41	RRT14	P40470	206 aa		4.54	□□□□□ -1.68
snR41	snR41	ACK1	Q07622	623 aa	Predicted RBP	4.54	□□□□□ -1.68
snR41	snR41	ACM1	Q08981	209 aa		4.54	□□□□□ -1.68
snR41	snR41	RPL11A	P0C0W9	174 aa	Known RBP	4.53	□□□□□ -1.68
snR41	snR41	DBP2	P24783	546 aa	Known RBP	4.53	□□□□□ -1.68
snR41	snR41	LYP1	P32487	611 aa		4.53	□□□□□ -1.68
snR41	snR41	SLA2	P33338	968 aa		4.53	□□□□□ -1.68
snR41	snR41	VPS62	P53285	467 aa		4.53	□□□□□ -1.68
snR41	snR41	PBP1	P53297	722 aa	Known RBP	4.53	□□□□□ -1.68
snR41	snR41	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
snR41	snR41	MSC2	Q03455	724 aa		4.53	□□□□□ -1.68
snR41	snR41	RXT3	Q07458	294 aa		4.53	□□□□□ -1.68
snR41	snR41	GPB1	Q08886	897 aa		4.53	□□□□□ -1.68
snR41	snR41	RPL11B	Q3E757	174 aa	Predicted RBP	4.53	□□□□□ -1.68
snR41	snR41	CDC34	P14682	295 aa		4.52	□□□□□ -1.69
snR41	snR41	STE11	P23561	717 aa		4.52	□□□□□ -1.69
snR41	snR41	APL1	P27351	700 aa		4.52	□□□□□ -1.69
snR41	snR41	PEP7	P32609	515 aa		4.52	□□□□□ -1.69
snR41	snR41	UGA2	P38067	497 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms