RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeastyeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG11YPR049C TAT1P38085 619 aa2.87□□□□□ -1.95
ATG11YPR049C TIF4631P39935 952 aaKnown RBP2.87□□□□□ -1.95
ATG11YPR049C SGD1Q06132 899 aa2.87□□□□□ -1.95
ATG11YPR049C TIM23P32897 222 aa2.87□□□□□ -1.95
ATG11YPR049C UIP5P36137 443 aa2.87□□□□□ -1.95
ATG11YPR049C GLY1P37303 387 aaKnown RBP2.87□□□□□ -1.95
ATG11YPR049C KSP1P38691 1029 aaKnown RBP2.87□□□□□ -1.95
ATG11YPR049C JIP5Q06214 492 aaPredicted RBP2.87□□□□□ -1.95
ATG11YPR049C NUM1Q00402 2748 aa2.87□□□□□ -1.95
ATG11YPR049C PUP1P25043 261 aa2.86□□□□□ -1.95
ATG11YPR049C STM1P39015 273 aaKnown RBP2.86□□□□□ -1.95
ATG11YPR049C UBP15P50101 1230 aa2.86□□□□□ -1.95
ATG11YPR049C PUF6Q04373 656 aaKnown RBP2.86□□□□□ -1.95
ATG11YPR049C PFK2P16862 959 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
ATG11YPR049C RAD53P22216 821 aa2.86□□□□□ -1.95
ATG11YPR049C CIC1P38779 376 aaKnown RBP2.86□□□□□ -1.95
ATG11YPR049C UBP3Q01477 912 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95 RIP-Chip
ATG11YPR049C GIN4Q12263 1142 aa2.86□□□□□ -1.95
ATG11YPR049C LAM4P38800 1345 aa2.86□□□□□ -1.95
ATG11YPR049C AI1P03875 834 aa2.86□□□□□ -1.95
ATG11YPR049C MOD5P07884 428 aa2.86□□□□□ -1.95
ATG11YPR049C SER1P33330 395 aaKnown RBP2.86□□□□□ -1.95
ATG11YPR049C NUG1P40010 520 aaKnown RBP2.86□□□□□ -1.95
ATG11YPR049C MON1P53129 644 aa2.86□□□□□ -1.95
ATG11YPR049C STE6P12866 1290 aa2.85□□□□□ -1.95
ATG11YPR049C PER1P25625 357 aa2.85□□□□□ -1.95
ATG11YPR049C RAD27P26793 382 aa2.85□□□□□ -1.95
ATG11YPR049C SEC20P28791 383 aa2.85□□□□□ -1.95
ATG11YPR049C MSH4P40965 878 aaPredicted RBP2.85□□□□□ -1.95
ATG11YPR049C RSC8P43609 557 aaKnown RBP2.85□□□□□ -1.95
ATG11YPR049C ART5P53244 586 aaKnown RBP2.85□□□□□ -1.95
ATG11YPR049C SOK2P53438 785 aaPredicted RBP2.85□□□□□ -1.95
ATG11YPR049C PRE10P21242 288 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
ATG11YPR049C JJJ2P46997 583 aa2.85□□□□□ -1.95
ATG11YPR049C PPT1P53043 513 aa2.85□□□□□ -1.95
ATG11YPR049C MAP1Q01662 387 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
ATG11YPR049C LCB5Q06147 687 aaKnown RBP2.85□□□□□ -1.95
ATG11YPR049C TPD3P31383 635 aa2.85□□□□□ -1.95
ATG11YPR049C QDR1P40475 563 aa2.84□□□□□ -1.95
ATG11YPR049C RRP46P53256 223 aaPredicted RBP2.84□□□□□ -1.95
ATG11YPR049C YNL034WP53963 612 aa2.84□□□□□ -1.95
ATG11YPR049C YNL018CP53976 612 aa2.84□□□□□ -1.95
ATG11YPR049C TOS4Q06266 489 aa2.84□□□□□ -1.95
ATG11YPR049C CFT2Q12102 859 aaPredicted RBP2.84□□□□□ -1.95
ATG11YPR049C YKL077WP36081 392 aa2.84□□□□□ -1.95
ATG11YPR049C ROG3P43602 733 aa2.84□□□□□ -1.95
ATG11YPR049C YGL082WP53155 381 aa2.84□□□□□ -1.95
ATG11YPR049C YOL057WQ08225 711 aa2.84□□□□□ -1.95
ATG11YPR049C MRT4P33201 236 aaKnown RBP2.84□□□□□ -1.96
ATG11YPR049C IRC4Q03036 179 aa2.84□□□□□ -1.96
ATG11YPR049C RPL40AP0CH08 128 aaKnown RBP2.83□□□□□ -1.96
ATG11YPR049C RPL40BP0CH09 128 aaKnown RBP2.83□□□□□ -1.96
ATG11YPR049C RGT1P32862 1170 aa2.83□□□□□ -1.96
ATG11YPR049C OCT1P35999 772 aa2.83□□□□□ -1.96
ATG11YPR049C MAM1P40065 302 aa2.83□□□□□ -1.96
ATG11YPR049C YIR007WP40566 764 aa2.83□□□□□ -1.96
ATG11YPR049C MRX10Q05648 414 aa2.83□□□□□ -1.96
ATG11YPR049C MGM1P32266 881 aa2.83□□□□□ -1.96
ATG11YPR049C OSH7P38755 437 aa2.83□□□□□ -1.96
ATG11YPR049C PEX13P80667 386 aa2.83□□□□□ -1.96
ATG11YPR049C NOC3Q07896 663 aaPredicted RBP2.83□□□□□ -1.96
ATG11YPR049C KAR2P16474 682 aaKnown RBP2.82□□□□□ -1.96
ATG11YPR049C APL2P36000 726 aaPredicted RBP2.82□□□□□ -1.96
ATG11YPR049C YML020WQ03722 664 aa2.82□□□□□ -1.96
ATG11YPR049C SVF1Q05515 481 aa2.82□□□□□ -1.96
ATG11YPR049C LIP5P32875 414 aa2.82□□□□□ -1.96
ATG11YPR049C YKR018CP36114 725 aa2.82□□□□□ -1.96
ATG11YPR049C SHU2P38957 223 aa2.82□□□□□ -1.96
ATG11YPR049C AKR1P39010 764 aa2.82□□□□□ -1.96
ATG11YPR049C ROM1P53046 1155 aa2.82□□□□□ -1.96
ATG11YPR049C RPT4P53549 437 aaKnown RBP2.82□□□□□ -1.96
ATG11YPR049C NSE3Q05541 303 aa2.82□□□□□ -1.96
ATG11YPR049C RSB1Q08417 382 aa2.82□□□□□ -1.96
ATG11YPR049C PCL8Q08966 492 aa2.82□□□□□ -1.96
ATG11YPR049C NFS1P25374 497 aa2.82□□□□□ -1.96
ATG11YPR049C RPS7AP26786 190 aaKnown RBP2.82□□□□□ -1.96
ATG11YPR049C SYN8P31377 255 aa2.82□□□□□ -1.96
ATG11YPR049C NOP2P40991 618 aaKnown RBP2.82□□□□□ -1.96
ATG11YPR049C SAM37P50110 327 aa2.82□□□□□ -1.96
ATG11YPR049C ZDS2P54786 942 aa2.82□□□□□ -1.96
ATG11YPR049C SAC7P17121 654 aa2.81□□□□□ -1.96
ATG11YPR049C PDC6P26263 563 aaKnown RBP2.81□□□□□ -1.96
ATG11YPR049C HSE1P38753 452 aa2.81□□□□□ -1.96
ATG11YPR049C HXT8P40886 569 aa2.81□□□□□ -1.96
ATG11YPR049C LYS5P50113 272 aa2.81□□□□□ -1.96
ATG11YPR049C PHR1P05066 565 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
ATG11YPR049C RPB10P22139 70 aa2.81□□□□□ -1.96
ATG11YPR049C TPS3P38426 1054 aaKnown RBP2.81□□□□□ -1.96
ATG11YPR049C DNM1P54861 757 aa2.81□□□□□ -1.96
ATG11YPR049C SKG3Q06315 1026 aa2.81□□□□□ -1.96
ATG11YPR049C SUP35P05453 685 aaKnown RBP2.8□□□□□ -1.96
ATG11YPR049C GCD6P32501 712 aaKnown RBP2.8□□□□□ -1.96
ATG11YPR049C LYS14P40971 790 aa2.8□□□□□ -1.96
ATG11YPR049C POL32P47110 350 aa2.8□□□□□ -1.96
ATG11YPR049C YHL050CP38721 697 aa2.8□□□□□ -1.96
ATG11YPR049C YHR219WP38900 624 aa2.8□□□□□ -1.96
ATG11YPR049C GPB2P39717 880 aa2.8□□□□□ -1.96
ATG11YPR049C VAB2P40003 282 aa2.8□□□□□ -1.96
ATG11YPR049C UFD2P54860 961 aa2.8□□□□□ -1.96
ATG11YPR049C UBX5Q06682 500 aa2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms