RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W RPS13P05756 151 aaKnown RBP7.24□□□□□ -1.25
VPS28YPL065W BAP2P38084 609 aa7.24□□□□□ -1.25
VPS28YPL065W PIK1P39104 1066 aa7.24□□□□□ -1.25
VPS28YPL065W HNT2P49775 206 aa7.24□□□□□ -1.25
VPS28YPL065W RAD2P07276 1031 aa7.23□□□□□ -1.25
VPS28YPL065W PUF4P25339 888 aaKnown RBP RIP-Chip data7.23□□□□□ -1.25not detected
VPS28YPL065W MCM2P29469 868 aa7.23□□□□□ -1.25
VPS28YPL065W FYV10P40492 516 aa7.23□□□□□ -1.25
VPS28YPL065W SEC26P41810 973 aaKnown RBP7.23□□□□□ -1.25
VPS28YPL065W SIW14P53965 281 aa7.23□□□□□ -1.25
VPS28YPL065W HDA2Q06629 674 aa7.23□□□□□ -1.25
VPS28YPL065W TOD6P34219 525 aa7.22□□□□□ -1.25
VPS28YPL065W FLR1P38124 548 aa7.22□□□□□ -1.25
VPS28YPL065W GPB2P39717 880 aa7.22□□□□□ -1.25
VPS28YPL065W TAF1P46677 1066 aa7.22□□□□□ -1.25
VPS28YPL065W YPL277CQ08989 487 aa7.22□□□□□ -1.25
VPS28YPL065W SPO21Q12411 609 aa7.22□□□□□ -1.25
VPS28YPL065W RCL1Q08096 367 aaPredicted RBP7.21□□□□□ -1.26
VPS28YPL065W CYC8P14922 966 aa7.2□□□□□ -1.26
VPS28YPL065W MET10P39692 1035 aa7.2□□□□□ -1.26
VPS28YPL065W ROD1Q02805 837 aa7.2□□□□□ -1.26
VPS28YPL065W MKK2P32491 506 aa7.19□□□□□ -1.26
VPS28YPL065W RPS26AP39938 119 aaKnown RBP7.19□□□□□ -1.26
VPS28YPL065W RPS26BP39939 119 aaKnown RBP7.19□□□□□ -1.26
VPS28YPL065W SPR28Q04921 423 aa7.19□□□□□ -1.26
VPS28YPL065W SGD1Q06132 899 aa7.19□□□□□ -1.26
VPS28YPL065W YLR358CO13565 187 aa7.18□□□□□ -1.26
VPS28YPL065W RGD1P38339 666 aa7.18□□□□□ -1.26
VPS28YPL065W SNF5P18480 905 aa7.17□□□□□ -1.26
VPS28YPL065W RAT1Q02792 1006 aaKnown RBP7.17□□□□□ -1.26
VPS28YPL065W MRL1Q06815 381 aa7.17□□□□□ -1.26
VPS28YPL065W SYP1P25623 870 aaKnown RBP7.15□□□□□ -1.26
VPS28YPL065W LAM1P38851 1228 aa7.15□□□□□ -1.26
VPS28YPL065W RSM24Q03976 319 aa7.15□□□□□ -1.26
VPS28YPL065W CYC1P00044 109 aaPredicted RBP7.14□□□□□ -1.27
VPS28YPL065W CNN1P43618 361 aa7.14□□□□□ -1.27
VPS28YPL065W PRE10P21242 288 aaKnown RBP RIP-Chip data7.13□□□□□ -1.27 RIP-Chip
VPS28YPL065W RAD27P26793 382 aa7.13□□□□□ -1.27
VPS28YPL065W RFC5P38251 354 aa7.13□□□□□ -1.27
VPS28YPL065W MEF2P39677 819 aa7.13□□□□□ -1.27
VPS28YPL065W HXT13P39924 564 aa7.13□□□□□ -1.27
VPS28YPL065W SPT20P50875 604 aa7.13□□□□□ -1.27
VPS28YPL065W HXT17P53631 564 aa7.13□□□□□ -1.27
VPS28YPL065W HXT15P54854 567 aa7.13□□□□□ -1.27
VPS28YPL065W GCN5Q03330 439 aa7.13□□□□□ -1.27
VPS28YPL065W CLU1Q03690 1277 aaKnown RBP7.13□□□□□ -1.27
VPS28YPL065W YDR132CQ03900 495 aa7.13□□□□□ -1.27
VPS28YPL065W JIP5Q06214 492 aaPredicted RBP7.13□□□□□ -1.27
VPS28YPL065W ESF1Q06344 628 aaKnown RBP7.13□□□□□ -1.27
VPS28YPL065W PEP7P32609 515 aa7.12□□□□□ -1.27
VPS28YPL065W GNP1P48813 663 aa7.12□□□□□ -1.27
VPS28YPL065W GCR1P07261 785 aa7.11□□□□□ -1.27
VPS28YPL065W DBP5P20449 482 aaKnown RBP7.11□□□□□ -1.27
VPS28YPL065W SVF1Q05515 481 aa7.11□□□□□ -1.27
VPS28YPL065W KIN2P13186 1147 aaKnown RBP7.1□□□□□ -1.27
VPS28YPL065W MLS1P30952 554 aa7.1□□□□□ -1.27
VPS28YPL065W GSF2Q04697 403 aaKnown RBP7.1□□□□□ -1.27
VPS28YPL065W YER152CP10356 443 aa7.09□□□□□ -1.27
VPS28YPL065W DOM34P33309 386 aa7.08□□□□□ -1.28
VPS28YPL065W PBP1P53297 722 aaKnown RBP7.08□□□□□ -1.28
VPS28YPL065W RMD1Q03441 430 aa7.08□□□□□ -1.28
VPS28YPL065W ROT1Q03691 256 aa7.08□□□□□ -1.28
VPS28YPL065W RTT10Q08924 1013 aa7.08□□□□□ -1.28
VPS28YPL065W SVS1Q12254 260 aa7.08□□□□□ -1.28
VPS28YPL065W ABZ1P37254 787 aaPredicted RBP7.07□□□□□ -1.28
VPS28YPL065W TAT2P38967 592 aa7.07□□□□□ -1.28
VPS28YPL065W TMA46Q12000 345 aaKnown RBP7.07□□□□□ -1.28
VPS28YPL065W MPT5P39016 859 aaKnown RBP RIP-Chip data7.06□□□□□ -1.28not detected
VPS28YPL065W MPH1P40562 993 aa7.06□□□□□ -1.28
VPS28YPL065W CMP2P14747 604 aa7.05□□□□□ -1.28
VPS28YPL065W CTS1P29029 562 aa7.05□□□□□ -1.28
VPS28YPL065W SHM2P37291 469 aaKnown RBP7.05□□□□□ -1.28
VPS28YPL065W ATG13Q06628 738 aa7.05□□□□□ -1.28
VPS28YPL065W RXT3Q07458 294 aa7.05□□□□□ -1.28
VPS28YPL065W GAL10P04397 699 aa7.04□□□□□ -1.28
VPS28YPL065W MCM7P38132 845 aa7.04□□□□□ -1.28
VPS28YPL065W DUS4Q06063 367 aa7.04□□□□□ -1.28
VPS28YPL065W GNT1Q12096 491 aa7.04□□□□□ -1.28
VPS28YPL065W THS1P04801 734 aaKnown RBP7.03□□□□□ -1.28
VPS28YPL065W BAS1P22035 811 aa7.03□□□□□ -1.28
VPS28YPL065W APL1P27351 700 aa7.03□□□□□ -1.28
VPS28YPL065W RER2P35196 286 aa7.03□□□□□ -1.28
VPS28YPL065W YFL054CP43549 646 aa7.03□□□□□ -1.28
VPS28YPL065W PLB2Q03674 706 aa7.03□□□□□ -1.28
VPS28YPL065W TIF35Q04067 274 aaKnown RBP7.02□□□□□ -1.29
VPS28YPL065W PET112P33893 541 aa7.01□□□□□ -1.29
VPS28YPL065W GEM1P39722 662 aa7.01□□□□□ -1.29
VPS28YPL065W MAD1P40957 749 aa7.01□□□□□ -1.29
VPS28YPL065W MAP1Q01662 387 aaKnown RBP RIP-Chip data7.01□□□□□ -1.29not detected
VPS28YPL065W VPS16Q03308 798 aa7.01□□□□□ -1.29
VPS28YPL065W SIZ1Q04195 904 aa7.01□□□□□ -1.29
VPS28YPL065W ACK1Q07622 623 aaPredicted RBP7.01□□□□□ -1.29
VPS28YPL065W GPB1Q08886 897 aa7.01□□□□□ -1.29
VPS28YPL065W ACM1Q08981 209 aa7.01□□□□□ -1.29
VPS28YPL065W TUB2P02557 457 aaKnown RBP7□□□□□ -1.29
VPS28YPL065W NAP1P25293 417 aaKnown RBP7□□□□□ -1.29
VPS28YPL065W UGA2P38067 497 aa7□□□□□ -1.29
VPS28YPL065W RRT14P40470 206 aa7□□□□□ -1.29
VPS28YPL065W VTS1Q08831 523 aaKnown RBP RIP-Chip data7□□□□□ -1.29not detected
VPS28YPL065W RPL11AP0C0W9 174 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms