RNA–Protein interactions for RNA: YPL040C

ISM1, Transcript of Mitochondrial isoleucyl-tRNA synthetase, yeast

Gene ISM1, Length 3,009 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ISM1	YPL040C	ROD1	Q02805	837 aa		4.17	□□□□□ -1.74
ISM1	YPL040C	YDL124W	Q07551	312 aa	Known RBP	4.17	□□□□□ -1.74
ISM1	YPL040C	DAT1	P13483	248 aa	Known RBP	4.17	□□□□□ -1.74
ISM1	YPL040C	OPI1	P21957	404 aa		4.17	□□□□□ -1.74
ISM1	YPL040C	MSH3	P25336	1018 aa		4.17	□□□□□ -1.74
ISM1	YPL040C	KCC4	P25389	1037 aa		4.17	□□□□□ -1.74
ISM1	YPL040C	AFR1	P33304	620 aa		4.17	□□□□□ -1.74
ISM1	YPL040C	YEL1	P34225	687 aa		4.17	□□□□□ -1.74
ISM1	YPL040C	RRN3	P36070	627 aa		4.17	□□□□□ -1.74
ISM1	YPL040C	KTR4	P38131	464 aa		4.17	□□□□□ -1.74
ISM1	YPL040C	NDE1	P40215	560 aa		4.17	□□□□□ -1.74
ISM1	YPL040C	SRB7	P47822	140 aa		4.17	□□□□□ -1.74
ISM1	YPL040C	LCB5	Q06147	687 aa	Known RBP	4.17	□□□□□ -1.74
ISM1	YPL040C	MLC2	Q06580	163 aa		4.17	□□□□□ -1.74
ISM1	YPL040C	INO1	P11986	533 aa		4.16	□□□□□ -1.74
ISM1	YPL040C	MCM10	P32354	571 aa		4.16	□□□□□ -1.74
ISM1	YPL040C	TBS1	P38114	1094 aa		4.16	□□□□□ -1.74
ISM1	YPL040C	EXO5	P38289	585 aa		4.16	□□□□□ -1.74
ISM1	YPL040C	SIT1	P39980	628 aa		4.16	□□□□□ -1.74
ISM1	YPL040C	YIL165C	P40446	119 aa		4.16	□□□□□ -1.74
ISM1	YPL040C	FRK1	Q03002	865 aa	Predicted RBP	4.16	□□□□□ -1.74
ISM1	YPL040C	PMT7	Q06644	662 aa		4.16	□□□□□ -1.74
ISM1	YPL040C	IMH1	Q06704	911 aa	Known RBP	4.16	□□□□□ -1.74
ISM1	YPL040C	PSK2	Q08217	1101 aa		4.16	□□□□□ -1.74
ISM1	YPL040C	YDR056C	Q12025	205 aa		4.16	□□□□□ -1.74
ISM1	YPL040C	KAP122	P32767	1081 aa		4.16	□□□□□ -1.74
ISM1	YPL040C	SEC61	P32915	480 aa		4.16	□□□□□ -1.74
ISM1	YPL040C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
ISM1	YPL040C	MOT2	P34909	587 aa	Known RBP	4.16	□□□□□ -1.74
ISM1	YPL040C	PAN5	P38787	379 aa		4.16	□□□□□ -1.74
ISM1	YPL040C	SKP1	P52286	194 aa		4.16	□□□□□ -1.74
ISM1	YPL040C	TRS130	Q03660	1102 aa		4.16	□□□□□ -1.74
ISM1	YPL040C	RKM4	Q12504	494 aa		4.16	□□□□□ -1.74
ISM1	YPL040C	MRS6	P32864	603 aa	Known RBP	4.16	□□□□□ -1.74
ISM1	YPL040C	MKS1	P34072	584 aa		4.16	□□□□□ -1.74
ISM1	YPL040C	AIM46	P38885	310 aa		4.16	□□□□□ -1.74
ISM1	YPL040C	OAF1	P39720	1047 aa	Predicted RBP	4.16	□□□□□ -1.74
ISM1	YPL040C	ACA1	P39970	489 aa		4.16	□□□□□ -1.74
ISM1	YPL040C	VNX1	P42839	908 aa		4.16	□□□□□ -1.74
ISM1	YPL040C	YJR096W	P47137	282 aa		4.16	□□□□□ -1.74
ISM1	YPL040C	WSC3	Q12215	556 aa		4.16	□□□□□ -1.74
ISM1	YPL040C	MSD1	P15179	658 aa	Known RBP	4.15	□□□□□ -1.74
ISM1	YPL040C	MPH1	P40562	993 aa		4.15	□□□□□ -1.74
ISM1	YPL040C	SAP185	P40856	1058 aa		4.15	□□□□□ -1.74
ISM1	YPL040C	ULI1	P43604	169 aa		4.15	□□□□□ -1.74
ISM1	YPL040C	HEM12	P32347	362 aa	Predicted RBP	4.15	□□□□□ -1.75
ISM1	YPL040C	APL2	P36000	726 aa	Predicted RBP	4.15	□□□□□ -1.75
ISM1	YPL040C	PCM1	P38628	557 aa	Known RBP	4.15	□□□□□ -1.75
ISM1	YPL040C	MNT3	P40549	630 aa		4.15	□□□□□ -1.75
ISM1	YPL040C	MEH1	Q02205	184 aa		4.15	□□□□□ -1.75
ISM1	YPL040C	HEH2	Q03281	663 aa		4.15	□□□□□ -1.75
ISM1	YPL040C	VIP1	Q06685	1146 aa	Known RBP	4.15	□□□□□ -1.75
ISM1	YPL040C	MED1	Q12321	566 aa		4.15	□□□□□ -1.75
ISM1	YPL040C	DAL3	P32459	195 aa		4.14	□□□□□ -1.75
ISM1	YPL040C	SPC29	P33419	253 aa		4.14	□□□□□ -1.75
ISM1	YPL040C	PET10	P36139	283 aa		4.14	□□□□□ -1.75
ISM1	YPL040C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
ISM1	YPL040C	YGL176C	P46945	554 aa		4.14	□□□□□ -1.75
ISM1	YPL040C	TRK1	P12685	1235 aa		4.14	□□□□□ -1.75
ISM1	YPL040C	SFL1	P20134	766 aa		4.14	□□□□□ -1.75
ISM1	YPL040C	PTH2	P34222	208 aa		4.14	□□□□□ -1.75
ISM1	YPL040C	NMD3	P38861	518 aa	Known RBP	4.14	□□□□□ -1.75
ISM1	YPL040C	JJJ2	P46997	583 aa		4.14	□□□□□ -1.75
ISM1	YPL040C	RSM26	P47141	266 aa		4.14	□□□□□ -1.75
ISM1	YPL040C	TY1A-DR3	Q12441	440 aa		4.14	□□□□□ -1.75
ISM1	YPL040C	AEP2	P22136	580 aa		4.13	□□□□□ -1.75
ISM1	YPL040C	PAT1	P25644	796 aa	Known RBP	4.13	□□□□□ -1.75
ISM1	YPL040C	TIF11	P38912	153 aa	Known RBP	4.13	□□□□□ -1.75
ISM1	YPL040C	CKB2	P38930	258 aa		4.13	□□□□□ -1.75
ISM1	YPL040C	TAF1	P46677	1066 aa		4.13	□□□□□ -1.75
ISM1	YPL040C	DSS1	P39112	969 aa		4.13	□□□□□ -1.75
ISM1	YPL040C	ERR3	P42222	437 aa		4.13	□□□□□ -1.75
ISM1	YPL040C	GZF3	P42944	551 aa	Known RBP	4.13	□□□□□ -1.75
ISM1	YPL040C	CAF16	P43569	289 aa		4.13	□□□□□ -1.75
ISM1	YPL040C	UPF3	P48412	387 aa	Known RBP	4.13	□□□□□ -1.75
ISM1	YPL040C	UBA2	P52488	636 aa		4.13	□□□□□ -1.75
ISM1	YPL040C	RAT1	Q02792	1006 aa	Known RBP	4.13	□□□□□ -1.75
ISM1	YPL040C	DFG5	Q05031	458 aa		4.13	□□□□□ -1.75
ISM1	YPL040C	BRE4	Q07660	1125 aa		4.13	□□□□□ -1.75
ISM1	YPL040C	YTM1	Q12024	460 aa	Predicted RBP	4.13	□□□□□ -1.75
ISM1	YPL040C	DBP5	P20449	482 aa	Known RBP	4.13	□□□□□ -1.75
ISM1	YPL040C	SLA1	P32790	1244 aa		4.13	□□□□□ -1.75
ISM1	YPL040C	SQT1	P35184	431 aa		4.13	□□□□□ -1.75
ISM1	YPL040C	YBR284W	P38150	797 aa		4.13	□□□□□ -1.75
ISM1	YPL040C	HIS6	P40545	261 aa		4.13	□□□□□ -1.75
ISM1	YPL040C	QRI7	P43122	407 aa		4.13	□□□□□ -1.75
ISM1	YPL040C	MEP3	P53390	489 aa		4.13	□□□□□ -1.75
ISM1	YPL040C	PAP2	P53632	584 aa	Known RBP	4.13	□□□□□ -1.75
ISM1	YPL040C	PEX13	P80667	386 aa		4.13	□□□□□ -1.75
ISM1	YPL040C	YML082W	Q04533	649 aa	Known RBP	4.13	□□□□□ -1.75
ISM1	YPL040C	CLF1	Q12309	687 aa	Predicted RBP	4.13	□□□□□ -1.75
ISM1	YPL040C	TY4B-P	A0A0B7P3V8	1104 aa		4.12	□□□□□ -1.75
ISM1	YPL040C	HOM3	P10869	527 aa		4.12	□□□□□ -1.75
ISM1	YPL040C	MIH1	P23748	554 aa		4.12	□□□□□ -1.75
ISM1	YPL040C	SIS1	P25294	352 aa	Known RBP	4.12	□□□□□ -1.75
ISM1	YPL040C	SPT16	P32558	1035 aa	Known RBP	4.12	□□□□□ -1.75
ISM1	YPL040C	AFG2	P32794	780 aa		4.12	□□□□□ -1.75
ISM1	YPL040C	NOP4	P37838	685 aa	Known RBP	4.12	□□□□□ -1.75
ISM1	YPL040C	CCT5	P40413	562 aa	Known RBP	4.12	□□□□□ -1.75
ISM1	YPL040C	CEG1	Q01159	459 aa	Predicted RBP	4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 310.7 ms