RNA–Protein interactions for RNA: YOR339C

UBC11, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC11, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC11YOR339C CDC19P00549 500 aaKnown RBP6.57□□□□□ -1.36
UBC11YOR339C ALG1P16661 449 aa6.57□□□□□ -1.36
UBC11YOR339C SRO9P25567 434 aaKnown RBP6.57□□□□□ -1.36
UBC11YOR339C ELM1P32801 640 aa6.57□□□□□ -1.36
UBC11YOR339C RFT1P38206 574 aaPredicted RBP6.57□□□□□ -1.36
UBC11YOR339C ORC6P38826 435 aa6.57□□□□□ -1.36
UBC11YOR339C GAA1P39012 614 aa6.57□□□□□ -1.36
UBC11YOR339C CCT5P40413 562 aaKnown RBP6.57□□□□□ -1.36
UBC11YOR339C ATG32P40458 529 aa6.57□□□□□ -1.36
UBC11YOR339C YGR125WP53273 1036 aa6.57□□□□□ -1.36
UBC11YOR339C ORC4P54791 529 aa6.57□□□□□ -1.36
UBC11YOR339C SLD5Q03406 294 aa6.57□□□□□ -1.36
UBC11YOR339C BUL2Q03758 920 aaKnown RBP6.57□□□□□ -1.36
UBC11YOR339C COG8Q04632 607 aa6.57□□□□□ -1.36
UBC11YOR339C YLR225CQ05948 407 aaKnown RBP6.57□□□□□ -1.36
UBC11YOR339C ERP3Q12403 225 aa6.57□□□□□ -1.36
UBC11YOR339C SRF1Q12516 437 aa6.57□□□□□ -1.36
UBC11YOR339C TUF1P02992 437 aaKnown RBP6.56□□□□□ -1.36
UBC11YOR339C SES1P07284 462 aaKnown RBP6.56□□□□□ -1.36
UBC11YOR339C MCM4P30665 933 aaKnown RBP6.56□□□□□ -1.36
UBC11YOR339C SRP40P32583 406 aaPredicted RBP6.56□□□□□ -1.36
UBC11YOR339C DID4P36108 232 aa6.56□□□□□ -1.36
UBC11YOR339C VPS29P38759 282 aa6.56□□□□□ -1.36
UBC11YOR339C ATG1P53104 897 aa6.56□□□□□ -1.36
UBC11YOR339C SDA1P53313 767 aaKnown RBP6.56□□□□□ -1.36
UBC11YOR339C RTC4P53850 401 aa6.56□□□□□ -1.36
UBC11YOR339C PTA1Q01329 785 aaPredicted RBP6.56□□□□□ -1.36
UBC11YOR339C OYE2Q03558 400 aaKnown RBP6.56□□□□□ -1.36
UBC11YOR339C MMR1Q06324 491 aa6.56□□□□□ -1.36
UBC11YOR339C WHI4Q07655 649 aaKnown RBP6.56□□□□□ -1.36
UBC11YOR339C ISA1Q07821 250 aaPredicted RBP6.56□□□□□ -1.36
UBC11YOR339C DDP1Q99321 188 aaKnown RBP6.56□□□□□ -1.36
UBC11YOR339C ILV1P00927 576 aaKnown RBP6.55□□□□□ -1.36
UBC11YOR339C TKL1P23254 680 aaKnown RBP6.55□□□□□ -1.36
UBC11YOR339C GSY1P23337 708 aa6.55□□□□□ -1.36
UBC11YOR339C MCM3P24279 971 aaKnown RBP6.55□□□□□ -1.36
UBC11YOR339C ROX1P25042 368 aa6.55□□□□□ -1.36
UBC11YOR339C MRM1P25270 412 aa6.55□□□□□ -1.36
UBC11YOR339C UBP11P36026 717 aa6.55□□□□□ -1.36
UBC11YOR339C REG2P38232 338 aa6.55□□□□□ -1.36
UBC11YOR339C RVS167P39743 482 aaKnown RBP6.55□□□□□ -1.36
UBC11YOR339C YGR153WP48238 217 aa6.55□□□□□ -1.36
UBC11YOR339C CUE3P53137 624 aaKnown RBP6.55□□□□□ -1.36
UBC11YOR339C YGL039WP53183 348 aaKnown RBP6.55□□□□□ -1.36
UBC11YOR339C MFM1Q02783 413 aa6.55□□□□□ -1.36
UBC11YOR339C AIM44Q99299 758 aa6.55□□□□□ -1.36
UBC11YOR339C TY1B-AO13527 1196 aaKnown RBP6.54□□□□□ -1.36
UBC11YOR339C ARL1P38116 183 aaKnown RBP6.54□□□□□ -1.36
UBC11YOR339C ISW1P38144 1129 aa6.54□□□□□ -1.36
UBC11YOR339C SNF7P39929 240 aaKnown RBP6.54□□□□□ -1.36
UBC11YOR339C RSM25P40496 264 aa6.54□□□□□ -1.36
UBC11YOR339C NCS6P53088 359 aa6.54□□□□□ -1.36
UBC11YOR339C VMS1Q04311 632 aaKnown RBP6.54□□□□□ -1.36
UBC11YOR339C YDR461C-AQ2V2P7 80 aa6.54□□□□□ -1.36
UBC11YOR339C TRS33Q99394 268 aa6.54□□□□□ -1.36
UBC11YOR339C HIS4P00815 799 aaKnown RBP6.53□□□□□ -1.36
UBC11YOR339C GPA1P08539 472 aa6.53□□□□□ -1.36
UBC11YOR339C ESS1P22696 170 aa6.53□□□□□ -1.36
UBC11YOR339C BMH1P29311 267 aaKnown RBP6.53□□□□□ -1.36
UBC11YOR339C DBP7P36120 742 aaKnown RBP6.53□□□□□ -1.36
UBC11YOR339C PET10P36139 283 aa6.53□□□□□ -1.36
UBC11YOR339C YER130CP39959 443 aa6.53□□□□□ -1.36
UBC11YOR339C BRE2P43132 505 aa6.53□□□□□ -1.36
UBC11YOR339C DAK2P43550 591 aa6.53□□□□□ -1.36
UBC11YOR339C YPT11P48559 417 aa6.53□□□□□ -1.36
UBC11YOR339C UBA2P52488 636 aa6.53□□□□□ -1.36
UBC11YOR339C DIP5P53388 608 aa6.53□□□□□ -1.36
UBC11YOR339C KRE33P53914 1056 aaKnown RBP6.53□□□□□ -1.36
UBC11YOR339C YMR321CQ04898 105 aa6.53□□□□□ -1.36
UBC11YOR339C ADY4Q05955 493 aa6.53□□□□□ -1.36
UBC11YOR339C PSR2Q07949 397 aa6.53□□□□□ -1.36
UBC11YOR339C MSC6Q08818 692 aaKnown RBP6.53□□□□□ -1.36
UBC11YOR339C SMC6Q12749 1114 aa6.53□□□□□ -1.36
UBC11YOR339C PRE10P21242 288 aaKnown RBP RIP-Chip data6.52□□□□□ -1.37not detected
UBC11YOR339C YUR1P26725 428 aa6.52□□□□□ -1.37
UBC11YOR339C CDC15P27636 974 aa6.52□□□□□ -1.37
UBC11YOR339C CLB5P30283 435 aa6.52□□□□□ -1.37
UBC11YOR339C RPN12P32496 274 aa6.52□□□□□ -1.37
UBC11YOR339C SEC8P32855 1065 aa6.52□□□□□ -1.37
UBC11YOR339C RGT1P32862 1170 aa6.52□□□□□ -1.37
UBC11YOR339C TFC4P33339 1025 aa6.52□□□□□ -1.37
UBC11YOR339C PGM1P33401 570 aaKnown RBP6.52□□□□□ -1.37
UBC11YOR339C YKT6P36015 200 aaKnown RBP6.52□□□□□ -1.37
UBC11YOR339C THI6P41835 540 aa6.52□□□□□ -1.37
UBC11YOR339C GPD2P41911 440 aaKnown RBP6.52□□□□□ -1.37
UBC11YOR339C UBP15P50101 1230 aa6.52□□□□□ -1.37
UBC11YOR339C SCS3P53012 380 aa6.52□□□□□ -1.37
UBC11YOR339C CBK1P53894 756 aa6.52□□□□□ -1.37
UBC11YOR339C PGA2P53903 129 aa6.52□□□□□ -1.37
UBC11YOR339C YLH47Q06493 454 aa6.52□□□□□ -1.37
UBC11YOR339C ETT1Q08421 412 aaKnown RBP6.52□□□□□ -1.37
UBC11YOR339C MET7Q08645 548 aa6.52□□□□□ -1.37
UBC11YOR339C FOB1O13329 566 aa6.51□□□□□ -1.37
UBC11YOR339C PGK1P00560 416 aaKnown RBP6.51□□□□□ -1.37
UBC11YOR339C YEL076C-AP0CX16 216 aa6.51□□□□□ -1.37
UBC11YOR339C YLR464WP0CX17 216 aa6.51□□□□□ -1.37
UBC11YOR339C SUP45P12385 437 aaKnown RBP6.51□□□□□ -1.37
UBC11YOR339C CLN3P13365 580 aa6.51□□□□□ -1.37
UBC11YOR339C NPR3P38742 1146 aa6.51□□□□□ -1.37
UBC11YOR339C PIH1P38768 344 aa6.51□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 47.5 ms