RNA–Protein interactions for RNA: YOR259C

RPT4, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT4, Length 1,314 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT4	YOR259C	TPM1	P17536	199 aa	Known RBP	6.11	□□□□□ -1.43
RPT4	YOR259C	VAN1	P23642	535 aa		6.11	□□□□□ -1.43
RPT4	YOR259C	RDS1	P25611	832 aa		6.11	□□□□□ -1.43
RPT4	YOR259C	PDC6	P26263	563 aa	Known RBP	6.11	□□□□□ -1.43
RPT4	YOR259C	DEP1	P31385	405 aa		6.11	□□□□□ -1.43
RPT4	YOR259C	UGA2	P38067	497 aa		6.11	□□□□□ -1.43
RPT4	YOR259C	PRP31	P49704	494 aa	Predicted RBP	6.11	□□□□□ -1.43
RPT4	YOR259C	YGR035C	P53222	116 aa		6.11	□□□□□ -1.43
RPT4	YOR259C	MRPS35	P53292	345 aa		6.11	□□□□□ -1.43
RPT4	YOR259C	YNL165W	P53891	406 aa		6.11	□□□□□ -1.43
RPT4	YOR259C	CUZ1	P53899	274 aa		6.11	□□□□□ -1.43
RPT4	YOR259C	ARP5	P53946	755 aa		6.11	□□□□□ -1.43
RPT4	YOR259C	NOB1	Q08444	459 aa	Known RBP	6.11	□□□□□ -1.43
RPT4	YOR259C	NOP14	Q99207	810 aa	Known RBP	6.11	□□□□□ -1.43
RPT4	YOR259C	SUP35	P05453	685 aa	Known RBP	6.1	□□□□□ -1.43
RPT4	YOR259C	RPS31	P05759	152 aa	Known RBP	6.1	□□□□□ -1.43
RPT4	YOR259C	CLB1	P24868	471 aa		6.1	□□□□□ -1.43
RPT4	YOR259C	NGR1	P32831	672 aa	Known RBP	6.1	□□□□□ -1.43
RPT4	YOR259C	OSW7	P43611	510 aa		6.1	□□□□□ -1.43
RPT4	YOR259C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	6.1	□□□□□ -1.43	not detected
RPT4	YOR259C	MLC1	P53141	149 aa		6.1	□□□□□ -1.43
RPT4	YOR259C	YML083C	Q04526	418 aa		6.1	□□□□□ -1.43
RPT4	YOR259C	GPA1	P08539	472 aa		6.09	□□□□□ -1.43
RPT4	YOR259C	RNA1	P11745	407 aa	Known RBP	6.09	□□□□□ -1.43
RPT4	YOR259C	YER130C	P39959	443 aa		6.09	□□□□□ -1.43
RPT4	YOR259C	VID28	P40547	921 aa		6.09	□□□□□ -1.43
RPT4	YOR259C	UBP16	Q02863	499 aa		6.09	□□□□□ -1.43
RPT4	YOR259C	DIB1	Q06819	143 aa	Predicted RBP	6.09	□□□□□ -1.43
RPT4	YOR259C	ELG1	Q12050	791 aa		6.09	□□□□□ -1.43
RPT4	YOR259C	DDP1	Q99321	188 aa	Known RBP	6.09	□□□□□ -1.43
RPT4	YOR259C	MLF3	P32047	452 aa		6.08	□□□□□ -1.44
RPT4	YOR259C	RRM3	P38766	723 aa		6.08	□□□□□ -1.44
RPT4	YOR259C	STM1	P39015	273 aa	Known RBP	6.08	□□□□□ -1.44
RPT4	YOR259C	FYV10	P40492	516 aa		6.08	□□□□□ -1.44
RPT4	YOR259C	SPO22	P40511	975 aa		6.08	□□□□□ -1.44
RPT4	YOR259C	YMR265C	Q03508	461 aa	Known RBP	6.08	□□□□□ -1.44
RPT4	YOR259C	BDF2	Q07442	638 aa		6.08	□□□□□ -1.44
RPT4	YOR259C	SUB2	Q07478	446 aa	Known RBP	6.08	□□□□□ -1.44
RPT4	YOR259C	SNU66	Q12420	587 aa	Predicted RBP	6.08	□□□□□ -1.44
RPT4	YOR259C	PGA3	Q12746	312 aa	Known RBP	6.08	□□□□□ -1.44
RPT4	YOR259C	PET123	P17558	318 aa		6.07	□□□□□ -1.44
RPT4	YOR259C	DIT1	P21623	536 aa		6.07	□□□□□ -1.44
RPT4	YOR259C	MRC1	P25588	1096 aa		6.07	□□□□□ -1.44
RPT4	YOR259C	KTR3	P38130	404 aa	Predicted RBP	6.07	□□□□□ -1.44
RPT4	YOR259C	NOC2	P39744	710 aa	Known RBP	6.07	□□□□□ -1.44
RPT4	YOR259C	YTA6	P40328	754 aa		6.07	□□□□□ -1.44
RPT4	YOR259C	YGL242C	P53066	181 aa		6.07	□□□□□ -1.44
RPT4	YOR259C	ALO1	P54783	526 aa	Known RBP	6.07	□□□□□ -1.44
RPT4	YOR259C	RNT1	Q02555	471 aa		6.07	□□□□□ -1.44
RPT4	YOR259C	TLG2	Q08144	397 aa		6.07	□□□□□ -1.44
RPT4	YOR259C	PSK2	Q08217	1101 aa		6.07	□□□□□ -1.44
RPT4	YOR259C	YPL150W	Q12152	901 aa		6.07	□□□□□ -1.44
RPT4	YOR259C	Q0182	Q9ZZW1	134 aa		6.07	□□□□□ -1.44
RPT4	YOR259C	ADR1	P07248	1323 aa		6.06	□□□□□ -1.44
RPT4	YOR259C	LEU1	P07264	779 aa	Known RBP	6.06	□□□□□ -1.44
RPT4	YOR259C	SEC18	P18759	758 aa	Known RBP	6.06	□□□□□ -1.44
RPT4	YOR259C	SUV3	P32580	737 aa		6.06	□□□□□ -1.44
RPT4	YOR259C	SCD5	P34758	872 aa		6.06	□□□□□ -1.44
RPT4	YOR259C	MAL33	P38157	468 aa		6.06	□□□□□ -1.44
RPT4	YOR259C	RFC5	P38251	354 aa		6.06	□□□□□ -1.44
RPT4	YOR259C	HXT5	P38695	592 aa		6.06	□□□□□ -1.44
RPT4	YOR259C	CIC1	P38779	376 aa	Known RBP	6.06	□□□□□ -1.44
RPT4	YOR259C	CEM1	P39525	442 aa		6.06	□□□□□ -1.44
RPT4	YOR259C	YPT11	P48559	417 aa		6.06	□□□□□ -1.44
RPT4	YOR259C	LYS5	P50113	272 aa		6.06	□□□□□ -1.44
RPT4	YOR259C	MRS2	Q01926	470 aa		6.06	□□□□□ -1.44
RPT4	YOR259C	SYF1	Q04048	859 aa	Predicted RBP	6.06	□□□□□ -1.44
RPT4	YOR259C	COG4	Q06096	861 aa		6.06	□□□□□ -1.44
RPT4	YOR259C	UTP4	Q06679	776 aa	Known RBP	6.06	□□□□□ -1.44
RPT4	YOR259C	HKR1	P41809	1802 aa		6.06	□□□□□ -1.44
RPT4	YOR259C	FIG2	P25653	1609 aa		6.06	□□□□□ -1.44
RPT4	YOR259C	FAS2	P19097	1887 aa	Known RBP	6.05	□□□□□ -1.44
RPT4	YOR259C	GSY2	P27472	705 aa		6.05	□□□□□ -1.44
RPT4	YOR259C	SRP40	P32583	406 aa	Predicted RBP	6.05	□□□□□ -1.44
RPT4	YOR259C	PFF1	P38244	976 aa		6.05	□□□□□ -1.44
RPT4	YOR259C	GDT1	P38301	280 aa	Predicted RBP	6.05	□□□□□ -1.44
RPT4	YOR259C	DSN1	P40568	576 aa		6.05	□□□□□ -1.44
RPT4	YOR259C	JJJ3	P47138	172 aa		6.05	□□□□□ -1.44
RPT4	YOR259C	YKE2	P52553	114 aa		6.05	□□□□□ -1.44
RPT4	YOR259C	PIB2	P53191	635 aa		6.05	□□□□□ -1.44
RPT4	YOR259C	WAR1	Q03631	944 aa		6.05	□□□□□ -1.44
RPT4	YOR259C	IRC3	Q06683	689 aa		6.05	□□□□□ -1.44
RPT4	YOR259C	DPH6	Q12429	685 aa		6.05	□□□□□ -1.44
RPT4	YOR259C	YKL068W-A	Q3E826	78 aa		6.05	□□□□□ -1.44
RPT4	YOR259C	POM152	P39685	1337 aa		6.05	□□□□□ -1.44
RPT4	YOR259C	PET111	P08468	800 aa		6.04	□□□□□ -1.44
RPT4	YOR259C	CAF20	P12962	161 aa	Known RBP	6.04	□□□□□ -1.44
RPT4	YOR259C	CDC15	P27636	974 aa		6.04	□□□□□ -1.44
RPT4	YOR259C	SMY1	P32364	656 aa	Known RBP	6.04	□□□□□ -1.44
RPT4	YOR259C	FRD1	P32614	470 aa	Known RBP	6.04	□□□□□ -1.44
RPT4	YOR259C	YHL017W	P38745	532 aa		6.04	□□□□□ -1.44
RPT4	YOR259C	VPS41	P38959	992 aa		6.04	□□□□□ -1.44
RPT4	YOR259C	ECM1	P39715	212 aa		6.04	□□□□□ -1.44
RPT4	YOR259C	YGL140C	P53120	1219 aa		6.04	□□□□□ -1.44
RPT4	YOR259C	YNL193W	P53870	558 aa		6.04	□□□□□ -1.44
RPT4	YOR259C	RPN7	Q06103	429 aa	Known RBP	6.04	□□□□□ -1.44
RPT4	YOR259C	THI3	Q07471	609 aa		6.04	□□□□□ -1.44
RPT4	YOR259C	GIN4	Q12263	1142 aa		6.04	□□□□□ -1.44
RPT4	YOR259C	YDR461C-A	Q2V2P7	80 aa		6.04	□□□□□ -1.44
RPT4	YOR259C	TRK2	P28584	889 aa		6.03	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 47.5 ms