RNA–Protein interactions for RNA: YOL116W

MSN1, Transcript of Transcriptional activator, yeast

Gene MSN1, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSN1	YOL116W	AFG2	P32794	780 aa		4.77	□□□□□ -1.65
MSN1	YOL116W	HSP78	P33416	811 aa		4.77	□□□□□ -1.65
MSN1	YOL116W	GTS1	P40956	396 aa		4.77	□□□□□ -1.65
MSN1	YOL116W	YJL045W	P47052	634 aa		4.77	□□□□□ -1.65
MSN1	YOL116W	ECL1	P48235	211 aa		4.77	□□□□□ -1.65
MSN1	YOL116W	SNU71	P53207	620 aa	Known RBP	4.77	□□□□□ -1.65
MSN1	YOL116W	ORC3	P54790	616 aa		4.77	□□□□□ -1.65
MSN1	YOL116W	SAM35	P14693	329 aa		4.76	□□□□□ -1.65
MSN1	YOL116W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
MSN1	YOL116W	POL12	P38121	705 aa	Predicted RBP	4.76	□□□□□ -1.65
MSN1	YOL116W	CCZ1	P38273	704 aa		4.76	□□□□□ -1.65
MSN1	YOL116W	RGD1	P38339	666 aa		4.76	□□□□□ -1.65
MSN1	YOL116W	CNN1	P43618	361 aa		4.76	□□□□□ -1.65
MSN1	YOL116W	TNA1	P53322	534 aa		4.76	□□□□□ -1.65
MSN1	YOL116W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	RIP-Chip
MSN1	YOL116W	HOS3	Q02959	697 aa	Known RBP	4.76	□□□□□ -1.65
MSN1	YOL116W	HXT13	P39924	564 aa		4.75	□□□□□ -1.65
MSN1	YOL116W	RPN3	P40016	523 aa	Known RBP	4.75	□□□□□ -1.65
MSN1	YOL116W	AVT1	P47082	602 aa		4.75	□□□□□ -1.65
MSN1	YOL116W	GNP1	P48813	663 aa		4.75	□□□□□ -1.65
MSN1	YOL116W	HXT17	P53631	564 aa		4.75	□□□□□ -1.65
MSN1	YOL116W	HXT15	P54854	567 aa		4.75	□□□□□ -1.65
MSN1	YOL116W	RAT1	Q02792	1006 aa	Known RBP	4.75	□□□□□ -1.65
MSN1	YOL116W	SPO21	Q12411	609 aa		4.75	□□□□□ -1.65
MSN1	YOL116W	CLN2	P20438	545 aa		4.74	□□□□□ -1.65
MSN1	YOL116W	KRI1	P42846	591 aa	Known RBP	4.74	□□□□□ -1.65
MSN1	YOL116W	ENV11	P53246	860 aa		4.74	□□□□□ -1.65
MSN1	YOL116W	RSB1	Q08417	382 aa		4.74	□□□□□ -1.65
MSN1	YOL116W	DFG16	Q99234	619 aa		4.74	□□□□□ -1.65
MSN1	YOL116W	ESP1	Q03018	1630 aa		4.73	□□□□□ -1.65
MSN1	YOL116W	CDC34	P14682	295 aa		4.73	□□□□□ -1.65
MSN1	YOL116W	DBP5	P20449	482 aa	Known RBP	4.73	□□□□□ -1.65
MSN1	YOL116W	AIM26	P32858	118 aa		4.73	□□□□□ -1.65
MSN1	YOL116W	RER2	P35196	286 aa		4.73	□□□□□ -1.65
MSN1	YOL116W	SNF7	P39929	240 aa	Known RBP	4.73	□□□□□ -1.65
MSN1	YOL116W	MAD1	P40957	749 aa		4.73	□□□□□ -1.65
MSN1	YOL116W	HNT2	P49775	206 aa		4.73	□□□□□ -1.65
MSN1	YOL116W	RSC58	Q07979	502 aa		4.73	□□□□□ -1.65
MSN1	YOL116W	SPS1	P08458	490 aa		4.72	□□□□□ -1.65
MSN1	YOL116W	MLS1	P30952	554 aa		4.72	□□□□□ -1.65
MSN1	YOL116W	SEA4	P38164	1038 aa		4.72	□□□□□ -1.65
MSN1	YOL116W	GPB2	P39717	880 aa		4.72	□□□□□ -1.65
MSN1	YOL116W	LPX1	Q12405	387 aa	Known RBP	4.72	□□□□□ -1.65
MSN1	YOL116W	SSK2	P53599	1579 aa		4.71	□□□□□ -1.66
MSN1	YOL116W	LYP1	P32487	611 aa		4.71	□□□□□ -1.66
MSN1	YOL116W	LRG1	P35688	1017 aa		4.71	□□□□□ -1.66
MSN1	YOL116W	BAP2	P38084	609 aa		4.71	□□□□□ -1.66
MSN1	YOL116W	MCM7	P38132	845 aa		4.71	□□□□□ -1.66
MSN1	YOL116W	PIK1	P39104	1066 aa		4.71	□□□□□ -1.66
MSN1	YOL116W	MET10	P39692	1035 aa		4.71	□□□□□ -1.66
MSN1	YOL116W	AOS1	Q06624	347 aa		4.71	□□□□□ -1.66
MSN1	YOL116W	SIN3	P22579	1536 aa		4.71	□□□□□ -1.66
MSN1	YOL116W	NIT1	P40447	199 aa		4.7	□□□□□ -1.66
MSN1	YOL116W	PRP43	P53131	767 aa	Known RBP	4.7	□□□□□ -1.66
MSN1	YOL116W	TYW3	P53177	273 aa		4.7	□□□□□ -1.66
MSN1	YOL116W	CWC24	P53769	259 aa		4.7	□□□□□ -1.66
MSN1	YOL116W	TIF35	Q04067	274 aa	Known RBP	4.7	□□□□□ -1.66
MSN1	YOL116W	SPO20	Q04359	397 aa		4.7	□□□□□ -1.66
MSN1	YOL116W	GNT1	Q12096	491 aa		4.7	□□□□□ -1.66
MSN1	YOL116W	ESC1	Q03661	1658 aa	Known RBP	4.7	□□□□□ -1.66
MSN1	YOL116W	ELM1	P32801	640 aa		4.69	□□□□□ -1.66
MSN1	YOL116W	SEG2	P34250	1132 aa		4.69	□□□□□ -1.66
MSN1	YOL116W	MPH1	P40562	993 aa		4.69	□□□□□ -1.66
MSN1	YOL116W	JIP5	Q06214	492 aa	Predicted RBP	4.69	□□□□□ -1.66
MSN1	YOL116W	YOR352W	Q08816	343 aa		4.69	□□□□□ -1.66
MSN1	YOL116W	TRP2	P00899	507 aa	Known RBP	4.68	□□□□□ -1.66
MSN1	YOL116W	YER152C	P10356	443 aa		4.68	□□□□□ -1.66
MSN1	YOL116W	DUT1	P33317	147 aa		4.68	□□□□□ -1.66
MSN1	YOL116W	SEC26	P41810	973 aa	Known RBP	4.68	□□□□□ -1.66
MSN1	YOL116W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
MSN1	YOL116W	RKM4	Q12504	494 aa		4.68	□□□□□ -1.66
MSN1	YOL116W	SCC2	Q04002	1493 aa		4.68	□□□□□ -1.66
MSN1	YOL116W	THS1	P04801	734 aa	Known RBP	4.67	□□□□□ -1.66
MSN1	YOL116W	SNF5	P18480	905 aa		4.67	□□□□□ -1.66
MSN1	YOL116W	YGR053C	P53234	283 aa		4.67	□□□□□ -1.66
MSN1	YOL116W	SNO2	P53823	222 aa		4.67	□□□□□ -1.66
MSN1	YOL116W	GDE1	Q02979	1223 aa		4.67	□□□□□ -1.66
MSN1	YOL116W	SPP382	Q06411	708 aa	Predicted RBP	4.67	□□□□□ -1.66
MSN1	YOL116W	RCL1	Q08096	367 aa	Predicted RBP	4.67	□□□□□ -1.66
MSN1	YOL116W	PIN2	Q12057	282 aa		4.67	□□□□□ -1.66
MSN1	YOL116W	CHD1	P32657	1468 aa		4.67	□□□□□ -1.66
MSN1	YOL116W	CDC25	P04821	1589 aa		4.66	□□□□□ -1.66
MSN1	YOL116W	DNF1	P32660	1571 aa		4.66	□□□□□ -1.66
MSN1	YOL116W	GAS1	P22146	559 aa	Known RBP	4.66	□□□□□ -1.66
MSN1	YOL116W	RFC5	P38251	354 aa		4.66	□□□□□ -1.66
MSN1	YOL116W	ETP1	P38748	585 aa	Known RBP	4.66	□□□□□ -1.66
MSN1	YOL116W	GEM1	P39722	662 aa		4.66	□□□□□ -1.66
MSN1	YOL116W	EEB1	Q02891	456 aa		4.66	□□□□□ -1.66
MSN1	YOL116W	INO1	P11986	533 aa		4.65	□□□□□ -1.67
MSN1	YOL116W	BAS1	P22035	811 aa		4.65	□□□□□ -1.67
MSN1	YOL116W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
MSN1	YOL116W	YKL107W	P34251	309 aa		4.65	□□□□□ -1.67
MSN1	YOL116W	MRPL22	P53881	309 aa		4.65	□□□□□ -1.67
MSN1	YOL116W	VPS16	Q03308	798 aa		4.65	□□□□□ -1.67
MSN1	YOL116W	RSM24	Q03976	319 aa		4.65	□□□□□ -1.67
MSN1	YOL116W	ACM1	Q08981	209 aa		4.65	□□□□□ -1.67
MSN1	YOL116W	RPL11A	P0C0W9	174 aa	Known RBP	4.64	□□□□□ -1.67
MSN1	YOL116W	KIN2	P13186	1147 aa	Known RBP	4.64	□□□□□ -1.67
MSN1	YOL116W	RNQ1	P25367	405 aa		4.64	□□□□□ -1.67
MSN1	YOL116W	UBP5	P39944	805 aa		4.64	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms