RNA–Protein interactions for RNA: YNL294C

RIM21, Transcript of pH sensor molecule, component of the RIM101 pathway, yeast

Gene RIM21, Length 1,602 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM21	YNL294C	LSC1	P53598	329 aa	Known RBP	4.88	□□□□□ -1.63
RIM21	YNL294C	FAR11	P53917	953 aa		4.88	□□□□□ -1.63
RIM21	YNL294C	REX2	P54964	269 aa	Known RBP	4.88	□□□□□ -1.63
RIM21	YNL294C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
RIM21	YNL294C	MSH6	Q03834	1242 aa		4.88	□□□□□ -1.63
RIM21	YNL294C	JIP5	Q06214	492 aa	Predicted RBP	4.88	□□□□□ -1.63
RIM21	YNL294C	RKM4	Q12504	494 aa		4.88	□□□□□ -1.63
RIM21	YNL294C	TRS33	Q99394	268 aa		4.88	□□□□□ -1.63
RIM21	YNL294C	PDR18	P53756	1333 aa		4.88	□□□□□ -1.63
RIM21	YNL294C	TRL1	P09880	827 aa	Known RBP	4.87	□□□□□ -1.63
RIM21	YNL294C	HAP4	P14064	554 aa		4.87	□□□□□ -1.63
RIM21	YNL294C	PHO84	P25297	587 aa	Known RBP	4.87	□□□□□ -1.63
RIM21	YNL294C	RPN12	P32496	274 aa		4.87	□□□□□ -1.63
RIM21	YNL294C	GRS1	P38088	690 aa	Known RBP	4.87	□□□□□ -1.63
RIM21	YNL294C	MAD1	P40957	749 aa		4.87	□□□□□ -1.63
RIM21	YNL294C	PUF6	Q04373	656 aa	Known RBP	4.87	□□□□□ -1.63
RIM21	YNL294C	FUS2	Q05670	677 aa		4.87	□□□□□ -1.63
RIM21	YNL294C	SSQ1	Q05931	657 aa	Predicted RBP	4.87	□□□□□ -1.63
RIM21	YNL294C	CMP2	P14747	604 aa		4.86	□□□□□ -1.63
RIM21	YNL294C	SEC66	P33754	206 aa		4.86	□□□□□ -1.63
RIM21	YNL294C	PET112	P33893	541 aa		4.86	□□□□□ -1.63
RIM21	YNL294C	PTH2	P34222	208 aa		4.86	□□□□□ -1.63
RIM21	YNL294C	HSM3	P38348	480 aa		4.86	□□□□□ -1.63
RIM21	YNL294C	OSH3	P38713	996 aa	Known RBP	4.86	□□□□□ -1.63
RIM21	YNL294C	YHL050C	P38721	697 aa		4.86	□□□□□ -1.63
RIM21	YNL294C	YHR219W	P38900	624 aa		4.86	□□□□□ -1.63
RIM21	YNL294C	MDJ2	P42834	146 aa		4.86	□□□□□ -1.63
RIM21	YNL294C	PRP31	P49704	494 aa	Predicted RBP	4.86	□□□□□ -1.63
RIM21	YNL294C	ROM1	P53046	1155 aa		4.86	□□□□□ -1.63
RIM21	YNL294C	ELA1	P53861	379 aa	Predicted RBP	4.86	□□□□□ -1.63
RIM21	YNL294C	VPS20	Q04272	221 aa		4.86	□□□□□ -1.63
RIM21	YNL294C	GYL1	Q04322	720 aa		4.86	□□□□□ -1.63
RIM21	YNL294C	RSA3	Q05942	220 aa	Known RBP	4.86	□□□□□ -1.63
RIM21	YNL294C	CMS1	Q07897	291 aa	Known RBP	4.86	□□□□□ -1.63
RIM21	YNL294C	CLP1	Q08685	445 aa	Predicted RBP	4.86	□□□□□ -1.63
RIM21	YNL294C	IQG1	Q12280	1495 aa		4.86	□□□□□ -1.63
RIM21	YNL294C	AUS1	Q08409	1394 aa		4.86	□□□□□ -1.63
RIM21	YNL294C	SRS2	P12954	1174 aa		4.86	□□□□□ -1.63
RIM21	YNL294C	NIP100	P33420	868 aa		4.86	□□□□□ -1.63
RIM21	YNL294C	VPS35	P34110	944 aa		4.86	□□□□□ -1.63
RIM21	YNL294C	MPE1	P35728	441 aa	Known RBP	4.86	□□□□□ -1.63
RIM21	YNL294C	NUP120	P35729	1037 aa		4.86	□□□□□ -1.63
RIM21	YNL294C	LHS1	P36016	881 aa		4.86	□□□□□ -1.63
RIM21	YNL294C	GGA2	P38817	585 aa	Known RBP	4.86	□□□□□ -1.63
RIM21	YNL294C	MAM1	P40065	302 aa		4.86	□□□□□ -1.63
RIM21	YNL294C	YJR142W	P47173	342 aa		4.86	□□□□□ -1.63
RIM21	YNL294C	ENP2	P48234	707 aa	Known RBP	4.86	□□□□□ -1.63
RIM21	YNL294C	LSG1	P53145	640 aa	Known RBP	4.86	□□□□□ -1.63
RIM21	YNL294C	ISU1	Q03020	165 aa		4.86	□□□□□ -1.63
RIM21	YNL294C	PNP1	Q05788	311 aa		4.86	□□□□□ -1.63
RIM21	YNL294C	SLK19	Q08581	821 aa	Known RBP	4.86	□□□□□ -1.63
RIM21	YNL294C	ABP140	Q08641	628 aa	Known RBP	4.86	□□□□□ -1.63
RIM21	YNL294C	SMC6	Q12749	1114 aa		4.86	□□□□□ -1.63
RIM21	YNL294C	SSK22	P25390	1331 aa	Predicted RBP	4.85	□□□□□ -1.63
RIM21	YNL294C	DRS2	P39524	1355 aa		4.85	□□□□□ -1.63
RIM21	YNL294C	SUI3	P09064	285 aa	Known RBP	4.85	□□□□□ -1.63
RIM21	YNL294C	OPI1	P21957	404 aa		4.85	□□□□□ -1.63
RIM21	YNL294C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
RIM21	YNL294C	MFT1	P33441	392 aa	Known RBP	4.85	□□□□□ -1.63
RIM21	YNL294C	BLI1	P35727	113 aa		4.85	□□□□□ -1.63
RIM21	YNL294C	HEL1	P36113	551 aa		4.85	□□□□□ -1.63
RIM21	YNL294C	SRL3	P36167	246 aa		4.85	□□□□□ -1.63
RIM21	YNL294C	RFC5	P38251	354 aa		4.85	□□□□□ -1.63
RIM21	YNL294C	CIC1	P38779	376 aa	Known RBP	4.85	□□□□□ -1.63
RIM21	YNL294C	ALD4	P46367	519 aa	Known RBP	4.85	□□□□□ -1.63
RIM21	YNL294C	BFA1	P47113	574 aa		4.85	□□□□□ -1.63
RIM21	YNL294C	CTF4	Q01454	927 aa		4.85	□□□□□ -1.63
RIM21	YNL294C	YML108W	Q03759	105 aa		4.85	□□□□□ -1.63
RIM21	YNL294C	PUN1	Q06991	263 aa		4.85	□□□□□ -1.63
RIM21	YNL294C	YML133C	Q03099	1374 aa		4.85	□□□□□ -1.63
RIM21	YNL294C	YLL067C	Q07888	1374 aa		4.85	□□□□□ -1.63
RIM21	YNL294C	YLL066C	Q99208	1374 aa		4.85	□□□□□ -1.63
RIM21	YNL294C	YCK2	P23292	546 aa	Known RBP	4.84	□□□□□ -1.63
RIM21	YNL294C	PAP1	P29468	568 aa	Known RBP	4.84	□□□□□ -1.63
RIM21	YNL294C	SWC3	P31376	625 aa		4.84	□□□□□ -1.63
RIM21	YNL294C	RPN2	P32565	945 aa	Known RBP	4.84	□□□□□ -1.63
RIM21	YNL294C	MAC1	P35192	417 aa		4.84	□□□□□ -1.63
RIM21	YNL294C	HXT5	P38695	592 aa		4.84	□□□□□ -1.63
RIM21	YNL294C	BOL3	P39724	118 aa		4.84	□□□□□ -1.63
RIM21	YNL294C	RVS167	P39743	482 aa	Known RBP	4.84	□□□□□ -1.63
RIM21	YNL294C	BOI2	P39969	1040 aa		4.84	□□□□□ -1.63
RIM21	YNL294C	VID28	P40547	921 aa		4.84	□□□□□ -1.63
RIM21	YNL294C	CIR1	P42940	261 aa		4.84	□□□□□ -1.63
RIM21	YNL294C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
RIM21	YNL294C	IOC3	P43596	787 aa		4.84	□□□□□ -1.63
RIM21	YNL294C	OCA1	P50946	238 aa	Predicted RBP	4.84	□□□□□ -1.63
RIM21	YNL294C	HST1	P53685	503 aa		4.84	□□□□□ -1.63
RIM21	YNL294C	TIM50	Q02776	476 aa		4.84	□□□□□ -1.63
RIM21	YNL294C	PNG1	Q02890	363 aa		4.84	□□□□□ -1.63
RIM21	YNL294C	SPN1	Q06505	410 aa	Predicted RBP	4.84	□□□□□ -1.63
RIM21	YNL294C	ARR2	Q06597	130 aa		4.84	□□□□□ -1.63
RIM21	YNL294C	PMT7	Q06644	662 aa		4.84	□□□□□ -1.63
RIM21	YNL294C	VAM6	Q07468	1049 aa		4.84	□□□□□ -1.63
RIM21	YNL294C	BUD7	Q08754	746 aa		4.84	□□□□□ -1.63
RIM21	YNL294C	TY4A-H	Q6Q5P6	413 aa		4.84	□□□□□ -1.63
RIM21	YNL294C	TSC13	Q99190	310 aa		4.84	□□□□□ -1.63
RIM21	YNL294C	GLT1	Q12680	2145 aa	Known RBP	4.84	□□□□□ -1.63
RIM21	YNL294C	RAV1	P47104	1357 aa		4.84	□□□□□ -1.63
RIM21	YNL294C	ATE1	P16639	503 aa		4.83	□□□□□ -1.64
RIM21	YNL294C	SEN2	P16658	377 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms