RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	INO1	P11986	533 aa		5.06	□□□□□ -1.6
TPM1	YNL079C	MLS1	P30952	554 aa		5.06	□□□□□ -1.6
TPM1	YNL079C	MOT2	P34909	587 aa	Known RBP	5.06	□□□□□ -1.6
TPM1	YNL079C	RGD1	P38339	666 aa		5.06	□□□□□ -1.6
TPM1	YNL079C	SAF1	P38352	637 aa		5.06	□□□□□ -1.6
TPM1	YNL079C	OCA5	P38738	679 aa		5.06	□□□□□ -1.6
TPM1	YNL079C	MPH1	P40562	993 aa		5.06	□□□□□ -1.6
TPM1	YNL079C	YLR225C	Q05948	407 aa	Known RBP	5.06	□□□□□ -1.6
TPM1	YNL079C	AOS1	Q06624	347 aa		5.06	□□□□□ -1.6
TPM1	YNL079C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.05	□□□□□ -1.6	not detected
TPM1	YNL079C	GRX1	P25373	110 aa	Known RBP	5.05	□□□□□ -1.6
TPM1	YNL079C	AGP1	P25376	633 aa		5.05	□□□□□ -1.6
TPM1	YNL079C	KIP1	P28742	1111 aa		5.05	□□□□□ -1.6
TPM1	YNL079C	ABD1	P32783	436 aa	Predicted RBP	5.05	□□□□□ -1.6
TPM1	YNL079C	SEA4	P38164	1038 aa		5.05	□□□□□ -1.6
TPM1	YNL079C	NMD3	P38861	518 aa	Known RBP	5.05	□□□□□ -1.6
TPM1	YNL079C	SPF1	P39986	1215 aa	Known RBP	5.05	□□□□□ -1.6
TPM1	YNL079C	CCT8	P47079	568 aa	Known RBP	5.05	□□□□□ -1.6
TPM1	YNL079C	EAR1	Q03212	550 aa		5.05	□□□□□ -1.6
TPM1	YNL079C	ESC2	Q06340	456 aa		5.05	□□□□□ -1.6
TPM1	YNL079C	HRK1	Q08732	759 aa	Known RBP	5.05	□□□□□ -1.6
TPM1	YNL079C	COQ2	P32378	372 aa		5.04	□□□□□ -1.6
TPM1	YNL079C	MCM7	P38132	845 aa		5.04	□□□□□ -1.6
TPM1	YNL079C	TAT2	P38967	592 aa		5.04	□□□□□ -1.6
TPM1	YNL079C	MMM1	P41800	426 aa		5.04	□□□□□ -1.6
TPM1	YNL079C	KRI1	P42846	591 aa	Known RBP	5.04	□□□□□ -1.6
TPM1	YNL079C	HNT2	P49775	206 aa		5.04	□□□□□ -1.6
TPM1	YNL079C	TPP1	Q03796	238 aa		5.04	□□□□□ -1.6
TPM1	YNL079C	TDA5	Q06417	326 aa	Known RBP	5.04	□□□□□ -1.6
TPM1	YNL079C	PUS7	Q08647	676 aa	Known RBP	5.04	□□□□□ -1.6
TPM1	YNL079C	YPL260W	Q08977	551 aa		5.04	□□□□□ -1.6
TPM1	YNL079C	RKM4	Q12504	494 aa		5.04	□□□□□ -1.6
TPM1	YNL079C	TY2B-LR1	P0C2J3	1770 aa		5.04	□□□□□ -1.6
TPM1	YNL079C	TY2B-F	P0CX63	1770 aa		5.04	□□□□□ -1.6
TPM1	YNL079C	TY2B-GR2	P0CX64	1770 aa		5.04	□□□□□ -1.6
TPM1	YNL079C	TY2B-C	P25384	1770 aa		5.04	□□□□□ -1.6
TPM1	YNL079C	TY2B-DR2	Q03494	1770 aa		5.04	□□□□□ -1.6
TPM1	YNL079C	TY1B-DR1	Q03855	1755 aa		5.04	□□□□□ -1.6
TPM1	YNL079C	TY2B-DR3	Q07791	1770 aa	Known RBP	5.04	□□□□□ -1.6
TPM1	YNL079C	TY2B-OR1	Q12113	1770 aa		5.04	□□□□□ -1.6
TPM1	YNL079C	TY2B-DR1	Q12472	1770 aa		5.04	□□□□□ -1.6
TPM1	YNL079C	TY2B-OR2	Q12501	1770 aa		5.04	□□□□□ -1.6
TPM1	YNL079C	SBA1	P28707	216 aa	Known RBP	5.03	□□□□□ -1.6
TPM1	YNL079C	WHI3	P34761	661 aa	Known RBP	5.03	□□□□□ -1.6
TPM1	YNL079C	YGL176C	P46945	554 aa		5.03	□□□□□ -1.6
TPM1	YNL079C	YJL049W	P47048	450 aa		5.03	□□□□□ -1.6
TPM1	YNL079C	YJL045W	P47052	634 aa		5.03	□□□□□ -1.6
TPM1	YNL079C	SHE9	Q04172	456 aa		5.03	□□□□□ -1.6
TPM1	YNL079C	YPL066W	Q12194	479 aa		5.03	□□□□□ -1.6
TPM1	YNL079C	YLR122C	Q12312	125 aa		5.03	□□□□□ -1.6
TPM1	YNL079C	SPO21	Q12411	609 aa		5.03	□□□□□ -1.6
TPM1	YNL079C	YER152C	P10356	443 aa		5.02	□□□□□ -1.61
TPM1	YNL079C	CHS2	P14180	963 aa		5.02	□□□□□ -1.61
TPM1	YNL079C	YKL107W	P34251	309 aa		5.02	□□□□□ -1.61
TPM1	YNL079C	GPB2	P39717	880 aa		5.02	□□□□□ -1.61
TPM1	YNL079C	CIT3	P43635	486 aa		5.02	□□□□□ -1.61
TPM1	YNL079C	MSB1	P21339	1137 aa	Known RBP	5.01	□□□□□ -1.61
TPM1	YNL079C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	5.01	□□□□□ -1.61	not detected
TPM1	YNL079C	KAE1	P36132	386 aa		5.01	□□□□□ -1.61
TPM1	YNL079C	VBA5	P36172	582 aa		5.01	□□□□□ -1.61
TPM1	YNL079C	YOR059C	Q08448	450 aa	Known RBP	5.01	□□□□□ -1.61
TPM1	YNL079C	GNT1	Q12096	491 aa		5.01	□□□□□ -1.61
TPM1	YNL079C	YVC1	Q12324	675 aa		5.01	□□□□□ -1.61
TPM1	YNL079C	YOL098C	Q12496	1037 aa		5.01	□□□□□ -1.61
TPM1	YNL079C	TY1B-DR3	Q99231	1755 aa		5.01	□□□□□ -1.61
TPM1	YNL079C	YSC84	P32793	468 aa		5	□□□□□ -1.61
TPM1	YNL079C	STE5	P32917	917 aa		5	□□□□□ -1.61
TPM1	YNL079C	SNF7	P39929	240 aa	Known RBP	5	□□□□□ -1.61
TPM1	YNL079C	RPN3	P40016	523 aa	Known RBP	5	□□□□□ -1.61
TPM1	YNL079C	LSB3	P43603	459 aa	Known RBP	5	□□□□□ -1.61
TPM1	YNL079C	RCM1	P53972	490 aa		5	□□□□□ -1.61
TPM1	YNL079C	ORC1	P54784	914 aa	Predicted RBP	5	□□□□□ -1.61
TPM1	YNL079C	NAN1	Q02931	896 aa	Known RBP	5	□□□□□ -1.61
TPM1	YNL079C	SNQ2	P32568	1501 aa	Known RBP	4.99	□□□□□ -1.61
TPM1	YNL079C	YBR184W	P38299	523 aa		4.99	□□□□□ -1.61
TPM1	YNL079C	SIP5	P40210	489 aa	Known RBP	4.99	□□□□□ -1.61
TPM1	YNL079C	OYE3	P41816	400 aa	Predicted RBP	4.99	□□□□□ -1.61
TPM1	YNL079C	IOC3	P43596	787 aa		4.99	□□□□□ -1.61
TPM1	YNL079C	HOS3	Q02959	697 aa	Known RBP	4.99	□□□□□ -1.61
TPM1	YNL079C	TY2B-B	Q12491	1770 aa		4.99	□□□□□ -1.61
TPM1	YNL079C	SAM35	P14693	329 aa		4.98	□□□□□ -1.61
TPM1	YNL079C	RAD4	P14736	754 aa		4.98	□□□□□ -1.61
TPM1	YNL079C	DBP2	P24783	546 aa	Known RBP	4.98	□□□□□ -1.61
TPM1	YNL079C	MRP8	P35719	219 aa		4.98	□□□□□ -1.61
TPM1	YNL079C	BAP2	P38084	609 aa		4.98	□□□□□ -1.61
TPM1	YNL079C	PNT1	P38969	423 aa		4.98	□□□□□ -1.61
TPM1	YNL079C	MBP1	P39678	833 aa		4.98	□□□□□ -1.61
TPM1	YNL079C	IRR1	P40541	1150 aa		4.98	□□□□□ -1.61
TPM1	YNL079C	TNA1	P53322	534 aa		4.98	□□□□□ -1.61
TPM1	YNL079C	MTC5	Q03897	1148 aa		4.98	□□□□□ -1.61
TPM1	YNL079C	NSE3	Q05541	303 aa		4.98	□□□□□ -1.61
TPM1	YNL079C	SPP382	Q06411	708 aa	Predicted RBP	4.98	□□□□□ -1.61
TPM1	YNL079C	SPP41	P38904	1435 aa		4.97	□□□□□ -1.61
TPM1	YNL079C	CDC25	P04821	1589 aa		4.97	□□□□□ -1.61
TPM1	YNL079C	RPL11A	P0C0W9	174 aa	Known RBP	4.97	□□□□□ -1.61
TPM1	YNL079C	SNF5	P18480	905 aa		4.97	□□□□□ -1.61
TPM1	YNL079C	PBY1	P38254	753 aa		4.97	□□□□□ -1.61
TPM1	YNL079C	YHL012W	P38709	493 aa		4.97	□□□□□ -1.61
TPM1	YNL079C	MXR1	P40029	184 aa		4.97	□□□□□ -1.61
TPM1	YNL079C	YGR130C	P53278	816 aa		4.97	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 31.4 ms