RNA–Protein interactions for RNA: YMR276W

DSK2, Transcript of Nuclear-enriched ubiquitin-like polyubiquitin-binding protein, yeast

Gene DSK2, Length 1,122 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DSK2	YMR276W	YDR524C-B	Q3E6R4	66 aa		13.63	□□□□□ -0.23
DSK2	YMR276W	YKR023W	P36119	530 aa	Known RBP	13.62	□□□□□ -0.23
DSK2	YMR276W	YHL017W	P38745	532 aa		13.62	□□□□□ -0.23
DSK2	YMR276W	BUD6	P41697	788 aa		13.62	□□□□□ -0.23
DSK2	YMR276W	YGR273C	P53329	174 aa		13.62	□□□□□ -0.23
DSK2	YMR276W	NAF1	P53919	492 aa	Known RBP	13.62	□□□□□ -0.23
DSK2	YMR276W	VPS72	Q03388	795 aa		13.62	□□□□□ -0.23
DSK2	YMR276W	MSC2	Q03455	724 aa		13.62	□□□□□ -0.23
DSK2	YMR276W	CEX1	Q12453	761 aa		13.62	□□□□□ -0.23
DSK2	YMR276W	CBP3	P21560	335 aa		13.61	□□□□□ -0.23
DSK2	YMR276W	TVP38	P36164	337 aa		13.61	□□□□□ -0.23
DSK2	YMR276W	AIM33	Q04516	312 aa		13.61	□□□□□ -0.23
DSK2	YMR276W	ATG11	Q12527	1178 aa		13.61	□□□□□ -0.23
DSK2	YMR276W	RET3	P53600	189 aa		13.6	□□□□□ -0.23
DSK2	YMR276W	YML020W	Q03722	664 aa		13.6	□□□□□ -0.23
DSK2	YMR276W	CSM3	Q04659	317 aa		13.6	□□□□□ -0.23
DSK2	YMR276W	MOT1	P32333	1867 aa		13.59	□□□□□ -0.23
DSK2	YMR276W	FKS1	P38631	1876 aa	Known RBP	13.59	□□□□□ -0.23
DSK2	YMR276W	UBP11	P36026	717 aa		13.59	□□□□□ -0.23
DSK2	YMR276W	CIT3	P43635	486 aa		13.59	□□□□□ -0.23
DSK2	YMR276W	CTF18	P49956	741 aa		13.59	□□□□□ -0.23
DSK2	YMR276W	DSE4	P53753	1117 aa		13.59	□□□□□ -0.23
DSK2	YMR276W	SVF1	Q05515	481 aa		13.59	□□□□□ -0.23
DSK2	YMR276W	PSK2	Q08217	1101 aa		13.59	□□□□□ -0.23
DSK2	YMR276W	PGK1	P00560	416 aa	Known RBP	13.58	□□□□□ -0.24
DSK2	YMR276W	CDC6	P09119	513 aa		13.58	□□□□□ -0.24
DSK2	YMR276W	ASF1	P32447	279 aa		13.58	□□□□□ -0.24
DSK2	YMR276W	DUR3	P33413	735 aa		13.58	□□□□□ -0.24
DSK2	YMR276W	GRS1	P38088	690 aa	Known RBP	13.58	□□□□□ -0.24
DSK2	YMR276W	CNM67	P53865	581 aa	Known RBP	13.58	□□□□□ -0.24
DSK2	YMR276W	PHM6	Q05637	104 aa		13.58	□□□□□ -0.24
DSK2	YMR276W	CRD1	Q07560	283 aa		13.58	□□□□□ -0.24
DSK2	YMR276W	ILV1	P00927	576 aa	Known RBP	13.57	□□□□□ -0.24
DSK2	YMR276W	VPS1	P21576	704 aa	Known RBP	13.57	□□□□□ -0.24
DSK2	YMR276W	KIN82	P25341	720 aa		13.57	□□□□□ -0.24
DSK2	YMR276W	MSC7	P38694	644 aa		13.57	□□□□□ -0.24
DSK2	YMR276W	ENT3	P47160	408 aa		13.57	□□□□□ -0.24
DSK2	YMR276W	ZPR1	P53303	486 aa	Known RBP	13.57	□□□□□ -0.24
DSK2	YMR276W	GPI13	Q07830	1017 aa		13.57	□□□□□ -0.24
DSK2	YMR276W	THR4	P16120	514 aa	Known RBP	13.56	□□□□□ -0.24
DSK2	YMR276W	AFT1	P22149	690 aa		13.56	□□□□□ -0.24
DSK2	YMR276W	ESS1	P22696	170 aa		13.56	□□□□□ -0.24
DSK2	YMR276W	POT1	P27796	417 aa	Known RBP RIP-Chip data	13.56	□□□□□ -0.24	not detected
DSK2	YMR276W	GAA1	P39012	614 aa		13.56	□□□□□ -0.24
DSK2	YMR276W	AZR1	P50080	613 aa		13.56	□□□□□ -0.24
DSK2	YMR276W	MDR1	P53258	950 aa		13.56	□□□□□ -0.24
DSK2	YMR276W	YVH1	Q02256	364 aa	Known RBP	13.56	□□□□□ -0.24
DSK2	YMR276W	MFM1	Q02783	413 aa		13.56	□□□□□ -0.24
DSK2	YMR276W	HSP82	P02829	709 aa	Known RBP	13.55	□□□□□ -0.24
DSK2	YMR276W	HIP1	P06775	603 aa		13.55	□□□□□ -0.24
DSK2	YMR276W	PGM1	P33401	570 aa	Known RBP	13.55	□□□□□ -0.24
DSK2	YMR276W	ORC6	P38826	435 aa		13.55	□□□□□ -0.24
DSK2	YMR276W	YEL025C	P39991	1188 aa		13.55	□□□□□ -0.24
DSK2	YMR276W	SGM1	P47166	707 aa		13.55	□□□□□ -0.24
DSK2	YMR276W	PSP2	P50109	593 aa	Known RBP	13.55	□□□□□ -0.24
DSK2	YMR276W	AHC1	Q12433	566 aa		13.55	□□□□□ -0.24
DSK2	YMR276W	RPL19A	P0CX82	189 aa	Known RBP	13.54	□□□□□ -0.24
DSK2	YMR276W	RPL19B	P0CX83	189 aa	Predicted RBP	13.54	□□□□□ -0.24
DSK2	YMR276W	GSY1	P23337	708 aa		13.54	□□□□□ -0.24
DSK2	YMR276W	ALD5	P40047	520 aa	Known RBP	13.54	□□□□□ -0.24
DSK2	YMR276W	GPD2	P41911	440 aa	Known RBP	13.54	□□□□□ -0.24
DSK2	YMR276W	TRS120	Q04183	1289 aa		13.54	□□□□□ -0.24
DSK2	YMR276W	GET3	Q12154	354 aa	Known RBP	13.54	□□□□□ -0.24
DSK2	YMR276W	FOL2	P51601	243 aa	Known RBP	13.53	□□□□□ -0.24
DSK2	YMR276W	SLK19	Q08581	821 aa	Known RBP	13.53	□□□□□ -0.24
DSK2	YMR276W	TIP41	Q12199	356 aa		13.53	□□□□□ -0.24
DSK2	YMR276W	RME1	P32338	300 aa	Known RBP	13.52	□□□□□ -0.25
DSK2	YMR276W	SUV3	P32580	737 aa		13.52	□□□□□ -0.25
DSK2	YMR276W	TTI1	P36097	1038 aa		13.52	□□□□□ -0.25
DSK2	YMR276W	ELG1	Q12050	791 aa		13.52	□□□□□ -0.25
DSK2	YMR276W	STT3	P39007	718 aa	Known RBP	13.51	□□□□□ -0.25
DSK2	YMR276W	ATG32	P40458	529 aa		13.51	□□□□□ -0.25
DSK2	YMR276W	YNL115C	P53925	644 aa		13.51	□□□□□ -0.25
DSK2	YMR276W	CDC48	P25694	835 aa	Known RBP	13.5	□□□□□ -0.25
DSK2	YMR276W	SMY2	P32909	740 aa	Known RBP	13.5	□□□□□ -0.25
DSK2	YMR276W	CAB3	P36076	571 aa		13.5	□□□□□ -0.25
DSK2	YMR276W	BRL1	P38770	471 aa		13.5	□□□□□ -0.25
DSK2	YMR276W	DCS2	Q12123	353 aa		13.5	□□□□□ -0.25
DSK2	YMR276W	RLF2	Q12495	606 aa		13.5	□□□□□ -0.25
DSK2	YMR276W	NBL1	Q3E7Y6	73 aa		13.5	□□□□□ -0.25
DSK2	YMR276W	SUP45	P12385	437 aa	Known RBP	13.49	□□□□□ -0.25
DSK2	YMR276W	IRE1	P32361	1115 aa		13.49	□□□□□ -0.25
DSK2	YMR276W	RFC5	P38251	354 aa		13.49	□□□□□ -0.25
DSK2	YMR276W	INP51	P40559	946 aa	Known RBP	13.49	□□□□□ -0.25
DSK2	YMR276W	DIP5	P53388	608 aa		13.49	□□□□□ -0.25
DSK2	YMR276W	CPA2	P03965	1118 aa	Known RBP	13.48	□□□□□ -0.25
DSK2	YMR276W	CLN3	P13365	580 aa		13.48	□□□□□ -0.25
DSK2	YMR276W	UBC1	P21734	215 aa	Known RBP	13.48	□□□□□ -0.25
DSK2	YMR276W	GUA1	P38625	525 aa	Known RBP	13.48	□□□□□ -0.25
DSK2	YMR276W	TVP23	P38962	199 aa		13.48	□□□□□ -0.25
DSK2	YMR276W	BRE2	P43132	505 aa		13.48	□□□□□ -0.25
DSK2	YMR276W	CUS1	Q02554	436 aa	Predicted RBP	13.48	□□□□□ -0.25
DSK2	YMR276W	YLH47	Q06493	454 aa		13.48	□□□□□ -0.25
DSK2	YMR276W	YOR296W	Q08748	1289 aa		13.48	□□□□□ -0.25
DSK2	YMR276W	YPL150W	Q12152	901 aa		13.48	□□□□□ -0.25
DSK2	YMR276W	UBR2	Q07963	1872 aa		13.47	□□□□□ -0.25
DSK2	YMR276W	MSS51	P32335	436 aa		13.47	□□□□□ -0.25
DSK2	YMR276W	VPS20	Q04272	221 aa		13.47	□□□□□ -0.25
DSK2	YMR276W	ALG1	P16661	449 aa		13.46	□□□□□ -0.25
DSK2	YMR276W	POA1	P38218	177 aa		13.46	□□□□□ -0.25

Retrieved 100 of 5,963 RNA–protein pairs in 258 ms