RNA–Protein interactions for RNA: YMR227C

TAF7, Transcript of TFIID subunit (67 kDa), yeast

Gene TAF7, Length 1,773 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TAF7	YMR227C	SAP1	P39955	897 aa	Known RBP	4.4	□□□□□ -1.71
TAF7	YMR227C	RTR1	P40084	226 aa	Predicted RBP	4.4	□□□□□ -1.71
TAF7	YMR227C	RIO2	P40160	425 aa	Known RBP	4.4	□□□□□ -1.71
TAF7	YMR227C	SET2	P46995	733 aa	Known RBP	4.4	□□□□□ -1.71
TAF7	YMR227C	VPS70	P47161	811 aa		4.4	□□□□□ -1.71
TAF7	YMR227C	RPA14	P50106	137 aa		4.4	□□□□□ -1.71
TAF7	YMR227C	MSN5	P52918	1224 aa		4.4	□□□□□ -1.71
TAF7	YMR227C	YNR029C	P53729	429 aa	Known RBP	4.4	□□□□□ -1.71
TAF7	YMR227C	YAF9	P53930	226 aa		4.4	□□□□□ -1.71
TAF7	YMR227C	MDM1	Q01846	1127 aa		4.4	□□□□□ -1.71
TAF7	YMR227C	RSM28	Q03430	361 aa		4.4	□□□□□ -1.71
TAF7	YMR227C	SPO71	Q03868	1245 aa		4.4	□□□□□ -1.71
TAF7	YMR227C	SSQ1	Q05931	657 aa	Predicted RBP	4.4	□□□□□ -1.71
TAF7	YMR227C	YIL002W-A	Q3E7Z5	69 aa		4.4	□□□□□ -1.71
TAF7	YMR227C	PET494	P07390	489 aa	Predicted RBP	4.39	□□□□□ -1.71
TAF7	YMR227C	SIT4	P20604	311 aa		4.39	□□□□□ -1.71
TAF7	YMR227C	SEC15	P22224	910 aa		4.39	□□□□□ -1.71
TAF7	YMR227C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.39	□□□□□ -1.71	not detected
TAF7	YMR227C	CDC48	P25694	835 aa	Known RBP	4.39	□□□□□ -1.71
TAF7	YMR227C	CPS1	P27614	576 aa		4.39	□□□□□ -1.71
TAF7	YMR227C	SMY2	P32909	740 aa	Known RBP	4.39	□□□□□ -1.71
TAF7	YMR227C	TBS1	P38114	1094 aa		4.39	□□□□□ -1.71
TAF7	YMR227C	UTP18	P40362	594 aa	Predicted RBP	4.39	□□□□□ -1.71
TAF7	YMR227C	LAM5	P43560	674 aa		4.39	□□□□□ -1.71
TAF7	YMR227C	MRS2	Q01926	470 aa		4.39	□□□□□ -1.71
TAF7	YMR227C	HOS3	Q02959	697 aa	Known RBP	4.39	□□□□□ -1.71
TAF7	YMR227C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.39	□□□□□ -1.71	not detected
TAF7	YMR227C	PHM6	Q05637	104 aa		4.39	□□□□□ -1.71
TAF7	YMR227C	CYB2	P00175	591 aa		4.38	□□□□□ -1.71
TAF7	YMR227C	SEC14	P24280	304 aa	Known RBP	4.38	□□□□□ -1.71
TAF7	YMR227C	MRE11	P32829	692 aa		4.38	□□□□□ -1.71
TAF7	YMR227C	VPS24	P36095	224 aa	Known RBP	4.38	□□□□□ -1.71
TAF7	YMR227C	TTI1	P36097	1038 aa		4.38	□□□□□ -1.71
TAF7	YMR227C	GDT1	P38301	280 aa	Predicted RBP	4.38	□□□□□ -1.71
TAF7	YMR227C	RTT107	P38850	1070 aa		4.38	□□□□□ -1.71
TAF7	YMR227C	MET18	P40469	1032 aa		4.38	□□□□□ -1.71
TAF7	YMR227C	ENP2	P48234	707 aa	Known RBP	4.38	□□□□□ -1.71
TAF7	YMR227C	ARP5	P53946	755 aa		4.38	□□□□□ -1.71
TAF7	YMR227C	PUF6	Q04373	656 aa	Known RBP	4.38	□□□□□ -1.71
TAF7	YMR227C	COG4	Q06096	861 aa		4.38	□□□□□ -1.71
TAF7	YMR227C	ARR2	Q06597	130 aa		4.38	□□□□□ -1.71
TAF7	YMR227C	CIR2	Q08822	631 aa		4.38	□□□□□ -1.71
TAF7	YMR227C	NUP145	P49687	1317 aa		4.38	□□□□□ -1.71
TAF7	YMR227C	TPM1	P17536	199 aa	Known RBP	4.37	□□□□□ -1.71
TAF7	YMR227C	SUI2	P20459	304 aa	Known RBP	4.37	□□□□□ -1.71
TAF7	YMR227C	APN1	P22936	367 aa		4.37	□□□□□ -1.71
TAF7	YMR227C	RME1	P32338	300 aa	Known RBP	4.37	□□□□□ -1.71
TAF7	YMR227C	PTH2	P34222	208 aa		4.37	□□□□□ -1.71
TAF7	YMR227C	MEF2	P39677	819 aa		4.37	□□□□□ -1.71
TAF7	YMR227C	RTT105	P40063	208 aa		4.37	□□□□□ -1.71
TAF7	YMR227C	HOP2	P53187	214 aa		4.37	□□□□□ -1.71
TAF7	YMR227C	RTC4	P53850	401 aa		4.37	□□□□□ -1.71
TAF7	YMR227C	PNG1	Q02890	363 aa		4.37	□□□□□ -1.71
TAF7	YMR227C	SNZ1	Q03148	297 aa		4.37	□□□□□ -1.71
TAF7	YMR227C	VTI1	Q04338	217 aa		4.37	□□□□□ -1.71
TAF7	YMR227C	DNF3	Q12674	1656 aa		4.37	□□□□□ -1.71
TAF7	YMR227C	SLY41	P22215	453 aa		4.37	□□□□□ -1.71
TAF7	YMR227C	MRPL25	P23369	157 aa		4.37	□□□□□ -1.71
TAF7	YMR227C	STE11	P23561	717 aa		4.37	□□□□□ -1.71
TAF7	YMR227C	PHO84	P25297	587 aa	Known RBP	4.37	□□□□□ -1.71
TAF7	YMR227C	SMY1	P32364	656 aa	Known RBP	4.37	□□□□□ -1.71
TAF7	YMR227C	SRB7	P47822	140 aa		4.37	□□□□□ -1.71
TAF7	YMR227C	SML1	Q04964	104 aa		4.37	□□□□□ -1.71
TAF7	YMR227C	YDL206W	Q12424	762 aa		4.37	□□□□□ -1.71
TAF7	YMR227C	YBL111C	Q3E7Y5	667 aa		4.37	□□□□□ -1.71
TAF7	YMR227C	PKC1	P24583	1151 aa		4.36	□□□□□ -1.71
TAF7	YMR227C	PRD1	P25375	712 aa		4.36	□□□□□ -1.71
TAF7	YMR227C	PAP1	P29468	568 aa	Known RBP	4.36	□□□□□ -1.71
TAF7	YMR227C	MET1	P36150	593 aa		4.36	□□□□□ -1.71
TAF7	YMR227C	YBL086C	P38177	466 aa		4.36	□□□□□ -1.71
TAF7	YMR227C	SPC72	P39723	622 aa		4.36	□□□□□ -1.71
TAF7	YMR227C	YER034W	P40022	185 aa	Known RBP	4.36	□□□□□ -1.71
TAF7	YMR227C	MAD1	P40957	749 aa		4.36	□□□□□ -1.71
TAF7	YMR227C	IOC3	P43596	787 aa		4.36	□□□□□ -1.71
TAF7	YMR227C	KRE28	Q04431	385 aa		4.36	□□□□□ -1.71
TAF7	YMR227C	FUS2	Q05670	677 aa		4.36	□□□□□ -1.71
TAF7	YMR227C	ENT2	Q05785	613 aa		4.36	□□□□□ -1.71
TAF7	YMR227C	ARV1	Q06541	321 aa		4.36	□□□□□ -1.71
TAF7	YMR227C	CSR1	Q06705	408 aa	Known RBP	4.36	□□□□□ -1.71
TAF7	YMR227C	SFI1	Q12369	946 aa		4.36	□□□□□ -1.71
TAF7	YMR227C	YRF1-4	O13559	1382 aa		4.36	□□□□□ -1.71
TAF7	YMR227C	SIR4	P11978	1358 aa		4.36	□□□□□ -1.71
TAF7	YMR227C	RPO41	P13433	1351 aa	Known RBP	4.36	□□□□□ -1.71
TAF7	YMR227C	CDC37	P06101	506 aa	Known RBP	4.35	□□□□□ -1.71
TAF7	YMR227C	NAT1	P12945	854 aa	Known RBP	4.35	□□□□□ -1.71
TAF7	YMR227C	SEN2	P16658	377 aa		4.35	□□□□□ -1.71
TAF7	YMR227C	IRR1	P40541	1150 aa		4.35	□□□□□ -1.71
TAF7	YMR227C	SAP155	P43612	1002 aa		4.35	□□□□□ -1.71
TAF7	YMR227C	SVL3	Q03088	825 aa	Known RBP	4.35	□□□□□ -1.71
TAF7	YMR227C	SSK22	P25390	1331 aa	Predicted RBP	4.35	□□□□□ -1.71
TAF7	YMR227C	RPB4	P20433	221 aa	Predicted RBP	4.35	□□□□□ -1.71
TAF7	YMR227C	YME2	P32843	850 aa		4.35	□□□□□ -1.71
TAF7	YMR227C	CSE1	P33307	960 aa		4.35	□□□□□ -1.71
TAF7	YMR227C	NUP120	P35729	1037 aa		4.35	□□□□□ -1.71
TAF7	YMR227C	SKN7	P38889	622 aa		4.35	□□□□□ -1.71
TAF7	YMR227C	FTR1	P40088	404 aa		4.35	□□□□□ -1.71
TAF7	YMR227C	ATG3	P40344	310 aa		4.35	□□□□□ -1.71
TAF7	YMR227C	RIC1	P40395	1056 aa		4.35	□□□□□ -1.71
TAF7	YMR227C	RRP46	P53256	223 aa	Predicted RBP	4.35	□□□□□ -1.71
TAF7	YMR227C	YMR187C	Q03236	431 aa		4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms