RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C NNK1P36003 928 aa7.05□□□□□ -1.28
CTF18YMR078C HSE1P38753 452 aa7.05□□□□□ -1.28
CTF18YMR078C RSP5P39940 809 aaKnown RBP7.05□□□□□ -1.28
CTF18YMR078C ALT1P52893 592 aa7.05□□□□□ -1.28
CTF18YMR078C EAR1Q03212 550 aa7.05□□□□□ -1.28
CTF18YMR078C YDR215CQ12240 137 aa7.05□□□□□ -1.28
CTF18YMR078C NMD2P38798 1089 aaKnown RBP7.04□□□□□ -1.28
CTF18YMR078C GPB2P39717 880 aa7.04□□□□□ -1.28
CTF18YMR078C SLN1P39928 1220 aaPredicted RBP7.04□□□□□ -1.28
CTF18YMR078C KRI1P42846 591 aaKnown RBP7.04□□□□□ -1.28
CTF18YMR078C YGR125WP53273 1036 aa7.04□□□□□ -1.28
CTF18YMR078C NSG2P53898 299 aa7.04□□□□□ -1.28
CTF18YMR078C DBP2P24783 546 aaKnown RBP7.04□□□□□ -1.28
CTF18YMR078C NFS1P25374 497 aa7.04□□□□□ -1.28
CTF18YMR078C SPO75Q07798 868 aa7.04□□□□□ -1.28
CTF18YMR078C TIM23P32897 222 aa7.03□□□□□ -1.28
CTF18YMR078C YJL045WP47052 634 aa7.03□□□□□ -1.28
CTF18YMR078C YPL260WQ08977 551 aa7.03□□□□□ -1.28
CTF18YMR078C UTP8P53276 713 aaKnown RBP7.03□□□□□ -1.28
CTF18YMR078C UBX5Q06682 500 aa7.03□□□□□ -1.28
CTF18YMR078C SPO21Q12411 609 aa7.03□□□□□ -1.28
CTF18YMR078C PNT1P38969 423 aa7.02□□□□□ -1.29
CTF18YMR078C ARI1P53111 347 aaKnown RBP7.02□□□□□ -1.29
CTF18YMR078C ALG12P53730 551 aa7.02□□□□□ -1.29
CTF18YMR078C EAF1Q06337 982 aa7.02□□□□□ -1.29
CTF18YMR078C RSC6P25632 483 aa7.01□□□□□ -1.29
CTF18YMR078C SPC42P36094 363 aa7.01□□□□□ -1.29
CTF18YMR078C OSH2Q12451 1283 aa7.01□□□□□ -1.29
CTF18YMR078C CIT1P00890 479 aa7.01□□□□□ -1.29
CTF18YMR078C CAN1P04817 590 aa7.01□□□□□ -1.29
CTF18YMR078C RPL11AP0C0W9 174 aaKnown RBP7.01□□□□□ -1.29
CTF18YMR078C RPS4AP0CX35 261 aaKnown RBP7.01□□□□□ -1.29
CTF18YMR078C RPS4BP0CX36 261 aaKnown RBP7.01□□□□□ -1.29
CTF18YMR078C HSP60P19882 572 aaKnown RBP7.01□□□□□ -1.29
CTF18YMR078C NUP82P40368 713 aa7.01□□□□□ -1.29
CTF18YMR078C YFL054CP43549 646 aa7.01□□□□□ -1.29
CTF18YMR078C RPL11BQ3E757 174 aaPredicted RBP7.01□□□□□ -1.29
CTF18YMR078C NAM7P30771 971 aaKnown RBP7□□□□□ -1.29
CTF18YMR078C HBS1P32769 611 aaKnown RBP7□□□□□ -1.29
CTF18YMR078C MXR1P40029 184 aa7□□□□□ -1.29
CTF18YMR078C OSW7P43611 510 aa7□□□□□ -1.29
CTF18YMR078C ERP6P53198 216 aa7□□□□□ -1.29
CTF18YMR078C DOS2P54858 310 aa7□□□□□ -1.29
CTF18YMR078C TAF8Q03750 510 aa7□□□□□ -1.29
CTF18YMR078C PUS7Q08647 676 aaKnown RBP7□□□□□ -1.29
CTF18YMR078C ERR1P0CX10 437 aa7□□□□□ -1.29
CTF18YMR078C ERR2P0CX11 437 aa7□□□□□ -1.29
CTF18YMR078C PPG1P32838 368 aa7□□□□□ -1.29
CTF18YMR078C ALR2P43553 858 aa6.99□□□□□ -1.29
CTF18YMR078C GIC2Q06648 383 aa6.99□□□□□ -1.29
CTF18YMR078C ARE1P25628 610 aa6.99□□□□□ -1.29
CTF18YMR078C RTA1P53047 317 aa6.99□□□□□ -1.29
CTF18YMR078C TPP1Q03796 238 aa6.99□□□□□ -1.29
CTF18YMR078C SPP382Q06411 708 aaPredicted RBP6.99□□□□□ -1.29
CTF18YMR078C RRP14P36080 434 aaKnown RBP6.98□□□□□ -1.29
CTF18YMR078C BRN1P38170 754 aa6.98□□□□□ -1.29
CTF18YMR078C CHZ1P40019 153 aaPredicted RBP6.98□□□□□ -1.29
CTF18YMR078C UBP3Q01477 912 aaKnown RBP RIP-Chip data6.98□□□□□ -1.29not detected
CTF18YMR078C YMR187CQ03236 431 aa6.98□□□□□ -1.29
CTF18YMR078C BET3P36149 193 aa6.97□□□□□ -1.29
CTF18YMR078C RCL1Q08096 367 aaPredicted RBP6.97□□□□□ -1.29
CTF18YMR078C HRK1Q08732 759 aaKnown RBP6.97□□□□□ -1.29
CTF18YMR078C YSC84P32793 468 aa6.97□□□□□ -1.29
CTF18YMR078C SNF7P39929 240 aaKnown RBP6.97□□□□□ -1.29
CTF18YMR078C RPN3P40016 523 aaKnown RBP6.97□□□□□ -1.29
CTF18YMR078C SNF5P18480 905 aa6.96□□□□□ -1.29
CTF18YMR078C PRP9P19736 530 aaKnown RBP6.96□□□□□ -1.29
CTF18YMR078C PGM1P33401 570 aaKnown RBP6.96□□□□□ -1.29
CTF18YMR078C AKR1P39010 764 aa6.96□□□□□ -1.29
CTF18YMR078C GUS1P46655 708 aaKnown RBP RIP-Chip data6.96□□□□□ -1.29not detected
CTF18YMR078C MCA1Q08601 432 aa6.96□□□□□ -1.29
CTF18YMR078C SKN7P38889 622 aa6.96□□□□□ -1.3
CTF18YMR078C BAP2P38084 609 aa6.95□□□□□ -1.3
CTF18YMR078C YVC1Q12324 675 aa6.95□□□□□ -1.3
CTF18YMR078C YPR053CQ6Q5F3 151 aa6.95□□□□□ -1.3
CTF18YMR078C SAM35P14693 329 aa6.95□□□□□ -1.3
CTF18YMR078C GAL11P19659 1081 aa6.95□□□□□ -1.3
CTF18YMR078C SLA2P33338 968 aa6.95□□□□□ -1.3
CTF18YMR078C HOS3Q02959 697 aaKnown RBP6.95□□□□□ -1.3
CTF18YMR078C PUF3Q07807 879 aaKnown RBP RIP-Chip data6.95□□□□□ -1.3not detected
CTF18YMR078C HBN1Q96VH4 193 aa6.95□□□□□ -1.3
CTF18YMR078C PHO8P11491 566 aa6.94□□□□□ -1.3
CTF18YMR078C WHI3P34761 661 aaKnown RBP6.94□□□□□ -1.3
CTF18YMR078C YKL151CP36059 337 aa6.94□□□□□ -1.3
CTF18YMR078C GGA2P38817 585 aaKnown RBP6.94□□□□□ -1.3
CTF18YMR078C NPL3Q01560 414 aaKnown RBP RIP-Chip data6.94□□□□□ -1.3not detected
CTF18YMR078C TOP3P13099 656 aa6.93□□□□□ -1.3
CTF18YMR078C YDR306CQ06640 478 aa6.93□□□□□ -1.3
CTF18YMR078C AFR1P33304 620 aa6.92□□□□□ -1.3
CTF18YMR078C TAT1P38085 619 aa6.92□□□□□ -1.3
CTF18YMR078C CCC2P38995 1004 aa6.92□□□□□ -1.3
CTF18YMR078C HUL4P40985 892 aa6.92□□□□□ -1.3
CTF18YMR078C MMM1P41800 426 aa6.92□□□□□ -1.3
CTF18YMR078C ACM1Q08981 209 aa6.92□□□□□ -1.3
CTF18YMR078C YLR125WQ12138 136 aa6.92□□□□□ -1.3
CTF18YMR078C PHM7Q12252 991 aa6.92□□□□□ -1.3
CTF18YMR078C HRQ1Q05549 1077 aa6.92□□□□□ -1.3
CTF18YMR078C DUS3Q06053 668 aaKnown RBP6.92□□□□□ -1.3
CTF18YMR078C MET6P05694 767 aaKnown RBP6.91□□□□□ -1.3
CTF18YMR078C UGA2P38067 497 aa6.91□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms