RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C SNF5P18480 905 aa6.37□□□□□ -1.39
VPS20YMR077C FAA3P39002 694 aa6.36□□□□□ -1.39
VPS20YMR077C RSM24Q03976 319 aa6.36□□□□□ -1.39
VPS20YMR077C PIC2P40035 300 aa6.35□□□□□ -1.39
VPS20YMR077C ENT3P47160 408 aa6.35□□□□□ -1.39
VPS20YMR077C SPO21Q12411 609 aa6.35□□□□□ -1.39
VPS20YMR077C DED1P06634 604 aaKnown RBP6.34□□□□□ -1.39
VPS20YMR077C RFC5P38251 354 aa6.34□□□□□ -1.39
VPS20YMR077C THI12P42883 340 aa6.34□□□□□ -1.39
VPS20YMR077C THI5P43534 340 aa6.34□□□□□ -1.39
VPS20YMR077C THI11P47183 340 aa6.34□□□□□ -1.39
VPS20YMR077C ROT1Q03691 256 aa6.34□□□□□ -1.39
VPS20YMR077C DUS4Q06063 367 aa6.34□□□□□ -1.39
VPS20YMR077C THI13Q07748 340 aa6.34□□□□□ -1.39
VPS20YMR077C MCD1Q12158 566 aa6.34□□□□□ -1.39
VPS20YMR077C TRM2P33753 639 aa6.33□□□□□ -1.4
VPS20YMR077C URN1Q06525 465 aaKnown RBP6.33□□□□□ -1.4
VPS20YMR077C RXT3Q07458 294 aa6.33□□□□□ -1.4
VPS20YMR077C SEC20P28791 383 aa6.32□□□□□ -1.4
VPS20YMR077C RPT1P33299 467 aaKnown RBP6.32□□□□□ -1.4
VPS20YMR077C PBP1P53297 722 aaKnown RBP6.32□□□□□ -1.4
VPS20YMR077C WHI5Q12416 295 aa6.32□□□□□ -1.4
VPS20YMR077C STE11P23561 717 aa6.31□□□□□ -1.4
VPS20YMR077C MRPS18P42847 217 aa6.31□□□□□ -1.4
VPS20YMR077C SIW14P53965 281 aa6.31□□□□□ -1.4
VPS20YMR077C PLB2Q03674 706 aa6.31□□□□□ -1.4
VPS20YMR077C KIN2P13186 1147 aaKnown RBP6.3□□□□□ -1.4
VPS20YMR077C RGD1P38339 666 aa6.3□□□□□ -1.4
VPS20YMR077C GAL10P04397 699 aa6.29□□□□□ -1.4
VPS20YMR077C CMP2P14747 604 aa6.29□□□□□ -1.4
VPS20YMR077C PRE9P23638 258 aaKnown RBP6.29□□□□□ -1.4
VPS20YMR077C YGR122WP53272 402 aa6.29□□□□□ -1.4
VPS20YMR077C ACK1Q07622 623 aaPredicted RBP6.29□□□□□ -1.4
VPS20YMR077C PUS9Q12069 462 aa6.29□□□□□ -1.4
VPS20YMR077C TAD3Q9URQ3 322 aa6.29□□□□□ -1.4
VPS20YMR077C CDC20P26309 610 aa6.28□□□□□ -1.4
VPS20YMR077C MKK2P32491 506 aa6.28□□□□□ -1.4
VPS20YMR077C MNN10P50108 393 aaKnown RBP6.28□□□□□ -1.4
VPS20YMR077C ROD1Q02805 837 aa6.28□□□□□ -1.4
VPS20YMR077C GPB1Q08886 897 aa6.28□□□□□ -1.4
VPS20YMR077C RAT1Q02792 1006 aaKnown RBP6.27□□□□□ -1.41
VPS20YMR077C SRM1P21827 482 aa6.26□□□□□ -1.41
VPS20YMR077C MSE1P48525 536 aa6.26□□□□□ -1.41
VPS20YMR077C SVS1Q12254 260 aa6.26□□□□□ -1.41
VPS20YMR077C HCM1P25364 564 aa6.25□□□□□ -1.41
VPS20YMR077C SEC8P32855 1065 aa6.25□□□□□ -1.41
VPS20YMR077C SIZ1Q04195 904 aa6.25□□□□□ -1.41
VPS20YMR077C SYP1P25623 870 aaKnown RBP6.24□□□□□ -1.41
VPS20YMR077C LST4P34239 828 aa6.24□□□□□ -1.41
VPS20YMR077C CNN1P43618 361 aa6.24□□□□□ -1.41
VPS20YMR077C MCM6P53091 1017 aaKnown RBP6.24□□□□□ -1.41
VPS20YMR077C ATG13Q06628 738 aa6.24□□□□□ -1.41
VPS20YMR077C CDC6P09119 513 aa6.23□□□□□ -1.41
VPS20YMR077C APL1P27351 700 aa6.23□□□□□ -1.41
VPS20YMR077C TMA10Q06177 86 aa6.23□□□□□ -1.41
VPS20YMR077C VTS1Q08831 523 aaKnown RBP RIP-Chip data6.23□□□□□ -1.41not detected
VPS20YMR077C RIB2Q12362 591 aaKnown RBP6.23□□□□□ -1.41
VPS20YMR077C RAD2P07276 1031 aa6.22□□□□□ -1.41
VPS20YMR077C YER152CP10356 443 aa6.22□□□□□ -1.41
VPS20YMR077C PMI40P29952 429 aaKnown RBP6.22□□□□□ -1.41
VPS20YMR077C HXT13P39924 564 aa6.22□□□□□ -1.41
VPS20YMR077C VPS62P53285 467 aa6.22□□□□□ -1.41
VPS20YMR077C HXT17P53631 564 aa6.22□□□□□ -1.41
VPS20YMR077C HXT15P54854 567 aa6.22□□□□□ -1.41
VPS20YMR077C NTO1Q12311 748 aa6.22□□□□□ -1.41
VPS20YMR077C MLS1P30952 554 aa6.21□□□□□ -1.42
VPS20YMR077C YFL054CP43549 646 aa6.21□□□□□ -1.42
VPS20YMR077C MAP1Q01662 387 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42not detected
VPS20YMR077C DBP5P20449 482 aaKnown RBP6.2□□□□□ -1.42
VPS20YMR077C GNP1P48813 663 aa6.2□□□□□ -1.42
VPS20YMR077C MRL1Q06815 381 aa6.2□□□□□ -1.42
VPS20YMR077C CYC8P14922 966 aa6.19□□□□□ -1.42
VPS20YMR077C SLD2P34252 453 aa6.18□□□□□ -1.42
VPS20YMR077C IPL1P38991 367 aa6.18□□□□□ -1.42
VPS20YMR077C MSC2Q03455 724 aa6.18□□□□□ -1.42
VPS20YMR077C YLR224WQ05947 369 aa6.18□□□□□ -1.42
VPS20YMR077C NOP12Q08208 459 aaKnown RBP6.18□□□□□ -1.42
VPS20YMR077C HMI1Q12039 706 aa6.18□□□□□ -1.42
VPS20YMR077C BAS1P22035 811 aa6.17□□□□□ -1.42
VPS20YMR077C MPH1P40562 993 aa6.17□□□□□ -1.42
VPS20YMR077C AIM21P40563 679 aa6.17□□□□□ -1.42
VPS20YMR077C GTF1P53260 183 aaPredicted RBP6.17□□□□□ -1.42
VPS20YMR077C SUN4P53616 420 aa6.17□□□□□ -1.42
VPS20YMR077C YAP6Q03935 383 aa6.17□□□□□ -1.42
VPS20YMR077C PMA1P05030 918 aaKnown RBP6.16□□□□□ -1.42
VPS20YMR077C ACE2P21192 770 aa6.16□□□□□ -1.42
VPS20YMR077C RPS26AP39938 119 aaKnown RBP6.16□□□□□ -1.42
VPS20YMR077C RPS26BP39939 119 aaKnown RBP6.16□□□□□ -1.42
VPS20YMR077C RRT14P40470 206 aa6.16□□□□□ -1.42
VPS20YMR077C SLI1P53304 468 aa6.16□□□□□ -1.42
VPS20YMR077C CTF4Q01454 927 aa6.16□□□□□ -1.42
VPS20YMR077C THS1P04801 734 aaKnown RBP6.15□□□□□ -1.42
VPS20YMR077C EMC1P25574 760 aa6.15□□□□□ -1.42
VPS20YMR077C DCG1P32460 244 aa6.15□□□□□ -1.42
VPS20YMR077C MGE1P38523 228 aa6.15□□□□□ -1.42
VPS20YMR077C ACM1Q08981 209 aa6.15□□□□□ -1.42
VPS20YMR077C GNT1Q12096 491 aa6.15□□□□□ -1.42
VPS20YMR077C GCR1P07261 785 aa6.14□□□□□ -1.43
VPS20YMR077C GEM1P39722 662 aa6.14□□□□□ -1.43
VPS20YMR077C RPP2AP05319 106 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 40.6 ms