RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W YJL049WP47048 450 aa6.51□□□□□ -1.37
SPO20YMR017W GNT1Q12096 491 aa6.51□□□□□ -1.37
SPO20YMR017W YER152CP10356 443 aa6.5□□□□□ -1.37
SPO20YMR017W MSB1P21339 1137 aaKnown RBP6.5□□□□□ -1.37
SPO20YMR017W LSB3P43603 459 aaKnown RBP6.5□□□□□ -1.37
SPO20YMR017W NAN1Q02931 896 aaKnown RBP6.5□□□□□ -1.37
SPO20YMR017W SHE9Q04172 456 aa6.5□□□□□ -1.37
SPO20YMR017W YOR059CQ08448 450 aaKnown RBP6.5□□□□□ -1.37
SPO20YMR017W YVC1Q12324 675 aa6.5□□□□□ -1.37
SPO20YMR017W VBA5P36172 582 aa6.49□□□□□ -1.37
SPO20YMR017W TAT2P38967 592 aa6.49□□□□□ -1.37
SPO20YMR017W RCM1P53972 490 aa6.49□□□□□ -1.37
SPO20YMR017W YSC84P32793 468 aa6.48□□□□□ -1.37
SPO20YMR017W PIN4P34217 668 aaKnown RBP RIP-Chip data6.48□□□□□ -1.37not detected
SPO20YMR017W YHL012WP38709 493 aa6.48□□□□□ -1.37
SPO20YMR017W SNF7P39929 240 aaKnown RBP6.48□□□□□ -1.37
SPO20YMR017W RPN3P40016 523 aaKnown RBP6.48□□□□□ -1.37
SPO20YMR017W YOL098CQ12496 1037 aa6.48□□□□□ -1.37
SPO20YMR017W MRP8P35719 219 aa6.47□□□□□ -1.37
SPO20YMR017W OYE3P41816 400 aaPredicted RBP6.47□□□□□ -1.37
SPO20YMR017W YGR130CP53278 816 aa6.47□□□□□ -1.37
SPO20YMR017W ORC1P54784 914 aaPredicted RBP6.47□□□□□ -1.37
SPO20YMR017W SPP382Q06411 708 aaPredicted RBP6.47□□□□□ -1.37
SPO20YMR017W RAD4P14736 754 aa6.46□□□□□ -1.38
SPO20YMR017W STE5P32917 917 aa6.46□□□□□ -1.38
SPO20YMR017W TNA1P53322 534 aa6.46□□□□□ -1.38
SPO20YMR017W HOS3Q02959 697 aaKnown RBP6.46□□□□□ -1.38
SPO20YMR017W MTC5Q03897 1148 aa6.46□□□□□ -1.38
SPO20YMR017W NSI1Q12457 570 aa6.46□□□□□ -1.38
SPO20YMR017W YTA7P40340 1379 aa6.45□□□□□ -1.38
SPO20YMR017W COQ4O13525 335 aa6.45□□□□□ -1.38
SPO20YMR017W YBR184WP38299 523 aa6.45□□□□□ -1.38
SPO20YMR017W MBP1P39678 833 aa6.45□□□□□ -1.38
SPO20YMR017W SIP5P40210 489 aaKnown RBP6.45□□□□□ -1.38
SPO20YMR017W IOC3P43596 787 aa6.45□□□□□ -1.38
SPO20YMR017W RPL11AP0C0W9 174 aaKnown RBP6.44□□□□□ -1.38
SPO20YMR017W SAM35P14693 329 aa6.44□□□□□ -1.38
SPO20YMR017W IRR1P40541 1150 aa6.44□□□□□ -1.38
SPO20YMR017W TIM54P47045 478 aa6.44□□□□□ -1.38
SPO20YMR017W NSE3Q05541 303 aa6.44□□□□□ -1.38
SPO20YMR017W TRE1Q08919 783 aa6.44□□□□□ -1.38
SPO20YMR017W RPL11BQ3E757 174 aaPredicted RBP6.44□□□□□ -1.38
SPO20YMR017W CYC7P00045 113 aa6.43□□□□□ -1.38
SPO20YMR017W TRP3P00937 484 aa6.43□□□□□ -1.38
SPO20YMR017W GCD1P09032 578 aaPredicted RBP6.43□□□□□ -1.38
SPO20YMR017W SNF5P18480 905 aa6.43□□□□□ -1.38
SPO20YMR017W SRO9P25567 434 aaKnown RBP6.43□□□□□ -1.38
SPO20YMR017W MDL2P33311 773 aa6.43□□□□□ -1.38
SPO20YMR017W PBY1P38254 753 aa6.43□□□□□ -1.38
SPO20YMR017W PNT1P38969 423 aa6.43□□□□□ -1.38
SPO20YMR017W MXR1P40029 184 aa6.43□□□□□ -1.38
SPO20YMR017W YFL054CP43549 646 aa6.43□□□□□ -1.38
SPO20YMR017W BDF2Q07442 638 aa6.43□□□□□ -1.38
SPO20YMR017W RCL1Q08096 367 aaPredicted RBP6.43□□□□□ -1.38
SPO20YMR017W DBP2P24783 546 aaKnown RBP6.42□□□□□ -1.38
SPO20YMR017W SRP40P32583 406 aaPredicted RBP6.42□□□□□ -1.38
SPO20YMR017W YKR073CP36153 106 aa6.42□□□□□ -1.38
SPO20YMR017W BAP2P38084 609 aa6.42□□□□□ -1.38
SPO20YMR017W CCZ1P38273 704 aa6.42□□□□□ -1.38
SPO20YMR017W PEX7P39108 375 aa6.42□□□□□ -1.38
SPO20YMR017W MED7Q08278 222 aa6.42□□□□□ -1.38
SPO20YMR017W CDC53Q12018 815 aaKnown RBP6.42□□□□□ -1.38
SPO20YMR017W PRO1P32264 428 aa6.41□□□□□ -1.38
SPO20YMR017W PFD1P46988 109 aa6.41□□□□□ -1.38
SPO20YMR017W HUL5P53119 910 aa6.41□□□□□ -1.38
SPO20YMR017W FMP25Q08023 583 aa6.41□□□□□ -1.38
SPO20YMR017W SBP1P10080 294 aaKnown RBP6.4□□□□□ -1.38
SPO20YMR017W STI1P15705 589 aaKnown RBP RIP-Chip data6.4□□□□□ -1.38not detected
SPO20YMR017W TOS1P38288 455 aa6.4□□□□□ -1.38
SPO20YMR017W PTC7P38797 343 aa6.4□□□□□ -1.38
SPO20YMR017W PIK1P39104 1066 aa6.4□□□□□ -1.38
SPO20YMR017W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.4□□□□□ -1.38not detected
SPO20YMR017W SPO75Q07798 868 aa6.4□□□□□ -1.38
SPO20YMR017W NBA1Q08229 501 aaKnown RBP6.4□□□□□ -1.38
SPO20YMR017W ACM1Q08981 209 aa6.4□□□□□ -1.38
SPO20YMR017W PRP9P19736 530 aaKnown RBP6.39□□□□□ -1.39
SPO20YMR017W RPL8BP29453 256 aaKnown RBP6.39□□□□□ -1.39
SPO20YMR017W YKL091CP33324 310 aaKnown RBP6.39□□□□□ -1.39
SPO20YMR017W GTS1P40956 396 aa6.39□□□□□ -1.39
SPO20YMR017W SDH1Q00711 640 aa6.39□□□□□ -1.39
SPO20YMR017W SSY1Q03770 852 aa6.39□□□□□ -1.39
SPO20YMR017W RSC58Q07979 502 aa6.39□□□□□ -1.39
SPO20YMR017W OSH2Q12451 1283 aa6.39□□□□□ -1.39
SPO20YMR017W SLA2P33338 968 aa6.38□□□□□ -1.39
SPO20YMR017W UGA2P38067 497 aa6.38□□□□□ -1.39
SPO20YMR017W GEM1P39722 662 aa6.38□□□□□ -1.39
SPO20YMR017W ERP6P53198 216 aa6.38□□□□□ -1.39
SPO20YMR017W ADP1P25371 1049 aa6.37□□□□□ -1.39
SPO20YMR017W AIM26P32858 118 aa6.37□□□□□ -1.39
SPO20YMR017W YHR020WP38708 688 aaKnown RBP6.37□□□□□ -1.39
SPO20YMR017W ALO1P54783 526 aaKnown RBP6.37□□□□□ -1.39
SPO20YMR017W EAF1Q06337 982 aa6.37□□□□□ -1.39
SPO20YMR017W RSB1Q08417 382 aa6.37□□□□□ -1.39
SPO20YMR017W YOR131CQ12486 218 aa6.37□□□□□ -1.39
SPO20YMR017W HSP60P19882 572 aaKnown RBP6.36□□□□□ -1.39
SPO20YMR017W ALR2P43553 858 aa6.36□□□□□ -1.39
SPO20YMR017W GUS1P46655 708 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
SPO20YMR017W YGR125WP53273 1036 aa6.36□□□□□ -1.39
SPO20YMR017W FPR4Q06205 392 aaPredicted RBP6.36□□□□□ -1.39
SPO20YMR017W YDR306CQ06640 478 aa6.36□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms