RNA–Protein interactions for RNA: YLR451W

LEU3, Transcript of Zinc-knuckle transcription factor, repressor and activator, yeast

Gene LEU3, Length 2,661 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LEU3	YLR451W	KIP1	P28742	1111 aa		3.42	□□□□□ -1.86
LEU3	YLR451W	RRM3	P38766	723 aa		3.42	□□□□□ -1.86
LEU3	YLR451W	CHZ1	P40019	153 aa	Predicted RBP	3.42	□□□□□ -1.86
LEU3	YLR451W	MTR4	P47047	1073 aa	Known RBP	3.42	□□□□□ -1.86
LEU3	YLR451W	ELA1	P53861	379 aa	Predicted RBP	3.42	□□□□□ -1.86
LEU3	YLR451W	PTC5	Q12511	572 aa		3.42	□□□□□ -1.86
LEU3	YLR451W	SNF5	P18480	905 aa		3.41	□□□□□ -1.86
LEU3	YLR451W	PPG1	P32838	368 aa		3.41	□□□□□ -1.86
LEU3	YLR451W	YKL107W	P34251	309 aa		3.41	□□□□□ -1.86
LEU3	YLR451W	BAP2	P38084	609 aa		3.41	□□□□□ -1.86
LEU3	YLR451W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	3.41	□□□□□ -1.86	not detected
LEU3	YLR451W	ALT1	P52893	592 aa		3.41	□□□□□ -1.86
LEU3	YLR451W	SPO20	Q04359	397 aa		3.41	□□□□□ -1.86
LEU3	YLR451W	EAF1	Q06337	982 aa		3.41	□□□□□ -1.86
LEU3	YLR451W	GNT1	Q12096	491 aa		3.41	□□□□□ -1.86
LEU3	YLR451W	PHO8	P11491	566 aa		3.41	□□□□□ -1.86
LEU3	YLR451W	YCK2	P23292	546 aa	Known RBP	3.41	□□□□□ -1.86
LEU3	YLR451W	MEF1	P25039	761 aa		3.41	□□□□□ -1.86
LEU3	YLR451W	NPP1	P25353	742 aa		3.41	□□□□□ -1.86
LEU3	YLR451W	GAR1	P28007	205 aa	Known RBP	3.41	□□□□□ -1.86
LEU3	YLR451W	SLA2	P33338	968 aa		3.41	□□□□□ -1.86
LEU3	YLR451W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	3.41	□□□□□ -1.86	not detected
LEU3	YLR451W	GPB2	P39717	880 aa		3.41	□□□□□ -1.86
LEU3	YLR451W	SAC7	P17121	654 aa		3.4	□□□□□ -1.86
LEU3	YLR451W	RET1	P22276	1149 aa	Known RBP	3.4	□□□□□ -1.86
LEU3	YLR451W	GPT2	P36148	743 aa		3.4	□□□□□ -1.86
LEU3	YLR451W	MNN1	P39106	762 aa		3.4	□□□□□ -1.86
LEU3	YLR451W	SAM35	P14693	329 aa		3.4	□□□□□ -1.87
LEU3	YLR451W	HSP60	P19882	572 aa	Known RBP	3.4	□□□□□ -1.87
LEU3	YLR451W	GRX4	P32642	244 aa		3.4	□□□□□ -1.87
LEU3	YLR451W	MAE1	P36013	669 aa	Known RBP	3.4	□□□□□ -1.87
LEU3	YLR451W	SIT1	P39980	628 aa		3.4	□□□□□ -1.87
LEU3	YLR451W	ALR2	P43553	858 aa		3.4	□□□□□ -1.87
LEU3	YLR451W	YJL045W	P47052	634 aa		3.4	□□□□□ -1.87
LEU3	YLR451W	ERP6	P53198	216 aa		3.4	□□□□□ -1.87
LEU3	YLR451W	DSE4	P53753	1117 aa		3.4	□□□□□ -1.87
LEU3	YLR451W	DNM1	P54861	757 aa		3.4	□□□□□ -1.87
LEU3	YLR451W	DOT1	Q04089	582 aa	Known RBP	3.4	□□□□□ -1.87
LEU3	YLR451W	YOR223W	Q12015	292 aa		3.4	□□□□□ -1.87
LEU3	YLR451W	AI3	P03877	415 aa		3.39	□□□□□ -1.87
LEU3	YLR451W	MCM7	P38132	845 aa		3.39	□□□□□ -1.87
LEU3	YLR451W	ATG36	P46983	293 aa		3.39	□□□□□ -1.87
LEU3	YLR451W	HRQ1	Q05549	1077 aa		3.39	□□□□□ -1.87
LEU3	YLR451W	NTG2	Q08214	380 aa		3.39	□□□□□ -1.87
LEU3	YLR451W	MET6	P05694	767 aa	Known RBP	3.39	□□□□□ -1.87
LEU3	YLR451W	MSH2	P25847	964 aa		3.39	□□□□□ -1.87
LEU3	YLR451W	HNT2	P49775	206 aa		3.39	□□□□□ -1.87
LEU3	YLR451W	ZDS1	P50111	915 aa	Known RBP	3.39	□□□□□ -1.87
LEU3	YLR451W	SPP382	Q06411	708 aa	Predicted RBP	3.39	□□□□□ -1.87
LEU3	YLR451W	SPO75	Q07798	868 aa		3.39	□□□□□ -1.87
LEU3	YLR451W	GLT1	Q12680	2145 aa	Known RBP	3.39	□□□□□ -1.87
LEU3	YLR451W	MSD1	P15179	658 aa	Known RBP	3.38	□□□□□ -1.87
LEU3	YLR451W	CDC12	P32468	407 aa	Known RBP	3.38	□□□□□ -1.87
LEU3	YLR451W	SMY2	P32909	740 aa	Known RBP	3.38	□□□□□ -1.87
LEU3	YLR451W	UGA2	P38067	497 aa		3.38	□□□□□ -1.87
LEU3	YLR451W	CCC2	P38995	1004 aa		3.38	□□□□□ -1.87
LEU3	YLR451W	YLR257W	Q06146	321 aa	Known RBP	3.38	□□□□□ -1.87
LEU3	YLR451W	YLR001C	Q07895	862 aa		3.38	□□□□□ -1.87
LEU3	YLR451W	RPL8A	P17076	256 aa	Known RBP	3.38	□□□□□ -1.87
LEU3	YLR451W	PGM1	P33401	570 aa	Known RBP	3.38	□□□□□ -1.87
LEU3	YLR451W	ABZ1	P37254	787 aa	Predicted RBP	3.38	□□□□□ -1.87
LEU3	YLR451W	YBR284W	P38150	797 aa		3.38	□□□□□ -1.87
LEU3	YLR451W	GDH3	P39708	457 aa		3.38	□□□□□ -1.87
LEU3	YLR451W	SLN1	P39928	1220 aa	Predicted RBP	3.38	□□□□□ -1.87
LEU3	YLR451W	TDA6	Q06466	467 aa		3.38	□□□□□ -1.87
LEU3	YLR451W	YLR125W	Q12138	136 aa		3.38	□□□□□ -1.87
LEU3	YLR451W	YDR215C	Q12240	137 aa		3.38	□□□□□ -1.87
LEU3	YLR451W	YOR131C	Q12486	218 aa		3.38	□□□□□ -1.87
LEU3	YLR451W	ARE1	P25628	610 aa		3.37	□□□□□ -1.87
LEU3	YLR451W	PRY1	P47032	299 aa		3.37	□□□□□ -1.87
LEU3	YLR451W	VPS53	P47061	822 aa		3.37	□□□□□ -1.87
LEU3	YLR451W	YPL260W	Q08977	551 aa		3.37	□□□□□ -1.87
LEU3	YLR451W	SPO21	Q12411	609 aa		3.37	□□□□□ -1.87
LEU3	YLR451W	MDM12	Q92328	271 aa		3.37	□□□□□ -1.87
LEU3	YLR451W	SFA1	P32771	386 aa		3.37	□□□□□ -1.87
LEU3	YLR451W	MCX1	P38323	520 aa	Predicted RBP	3.37	□□□□□ -1.87
LEU3	YLR451W	UBP12	P39538	1254 aa		3.37	□□□□□ -1.87
LEU3	YLR451W	SEC26	P41810	973 aa	Known RBP	3.37	□□□□□ -1.87
LEU3	YLR451W	UBP6	P43593	499 aa	Known RBP	3.37	□□□□□ -1.87
LEU3	YLR451W	RPN3	P40016	523 aa	Known RBP	3.37	□□□□□ -1.87
LEU3	YLR451W	OSW7	P43611	510 aa		3.37	□□□□□ -1.87
LEU3	YLR451W	YKE2	P52553	114 aa		3.37	□□□□□ -1.87
LEU3	YLR451W	GPG1	P53130	126 aa		3.37	□□□□□ -1.87
LEU3	YLR451W	YGR035C	P53222	116 aa		3.37	□□□□□ -1.87
LEU3	YLR451W	PUS7	Q08647	676 aa	Known RBP	3.37	□□□□□ -1.87
LEU3	YLR451W	OSH2	Q12451	1283 aa		3.37	□□□□□ -1.87
LEU3	YLR451W	NAM7	P30771	971 aa	Known RBP	3.36	□□□□□ -1.87
LEU3	YLR451W	THI4	P32318	326 aa		3.36	□□□□□ -1.87
LEU3	YLR451W	YSC84	P32793	468 aa		3.36	□□□□□ -1.87
LEU3	YLR451W	PET10	P36139	283 aa		3.36	□□□□□ -1.87
LEU3	YLR451W	TSL1	P38427	1098 aa	Known RBP	3.36	□□□□□ -1.87
LEU3	YLR451W	GGA2	P38817	585 aa	Known RBP	3.36	□□□□□ -1.87
LEU3	YLR451W	BOI2	P39969	1040 aa		3.36	□□□□□ -1.87
LEU3	YLR451W	RIB2	Q12362	591 aa	Known RBP	3.36	□□□□□ -1.87
LEU3	YLR451W	NOP14	Q99207	810 aa	Known RBP	3.36	□□□□□ -1.87
LEU3	YLR451W	GAL11	P19659	1081 aa		3.36	□□□□□ -1.87
LEU3	YLR451W	NFS1	P25374	497 aa		3.36	□□□□□ -1.87
LEU3	YLR451W	TRK2	P28584	889 aa		3.36	□□□□□ -1.87
LEU3	YLR451W	NNK1	P36003	928 aa		3.36	□□□□□ -1.87
LEU3	YLR451W	FPR3	P38911	411 aa	Known RBP	3.36	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms