RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN13, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN13YLR421C MCD1Q12158 566 aa5.33□□□□□ -1.56
RPN13YLR421C LAM1P38851 1228 aa5.32□□□□□ -1.56
RPN13YLR421C YFL054CP43549 646 aa5.32□□□□□ -1.56
RPN13YLR421C ROT1Q03691 256 aa5.32□□□□□ -1.56
RPN13YLR421C YDR132CQ03900 495 aa5.32□□□□□ -1.56
RPN13YLR421C YPL260WQ08977 551 aa5.32□□□□□ -1.56
RPN13YLR421C TAF13P11747 167 aa5.31□□□□□ -1.56
RPN13YLR421C PRE10P21242 288 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
RPN13YLR421C PUF4P25339 888 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
RPN13YLR421C MKK2P32491 506 aa5.31□□□□□ -1.56
RPN13YLR421C SHM2P37291 469 aaKnown RBP5.31□□□□□ -1.56
RPN13YLR421C MEF2P39677 819 aa5.31□□□□□ -1.56
RPN13YLR421C RPS26AP39938 119 aaKnown RBP5.31□□□□□ -1.56
RPN13YLR421C RPS26BP39939 119 aaKnown RBP5.31□□□□□ -1.56
RPN13YLR421C SEN54Q02825 467 aaPredicted RBP5.31□□□□□ -1.56
RPN13YLR421C GCN5Q03330 439 aa5.31□□□□□ -1.56
RPN13YLR421C RAD2P07276 1031 aa5.3□□□□□ -1.56
RPN13YLR421C CTS1P29029 562 aa5.3□□□□□ -1.56
RPN13YLR421C RPN3P40016 523 aaKnown RBP5.3□□□□□ -1.56
RPN13YLR421C SIW14P53965 281 aa5.3□□□□□ -1.56
RPN13YLR421C MCM2P29469 868 aa5.29□□□□□ -1.56
RPN13YLR421C SEC8P32855 1065 aa5.29□□□□□ -1.56
RPN13YLR421C HNT2P49775 206 aa5.29□□□□□ -1.56
RPN13YLR421C PLB2Q03674 706 aa5.29□□□□□ -1.56
RPN13YLR421C MRL1Q06815 381 aa5.29□□□□□ -1.56
RPN13YLR421C YER152CP10356 443 aa5.28□□□□□ -1.56
RPN13YLR421C CYC8P14922 966 aa5.28□□□□□ -1.56
RPN13YLR421C GAL10P04397 699 aa5.27□□□□□ -1.57
RPN13YLR421C CMP2P14747 604 aa5.27□□□□□ -1.57
RPN13YLR421C SYP1P25623 870 aaKnown RBP5.27□□□□□ -1.57
RPN13YLR421C MLS1P30952 554 aa5.27□□□□□ -1.57
RPN13YLR421C MPT5P39016 859 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
RPN13YLR421C HXT13P39924 564 aa5.27□□□□□ -1.57
RPN13YLR421C GNP1P48813 663 aa5.27□□□□□ -1.57
RPN13YLR421C HXT17P53631 564 aa5.27□□□□□ -1.57
RPN13YLR421C HXT15P54854 567 aa5.27□□□□□ -1.57
RPN13YLR421C RSM24Q03976 319 aa5.27□□□□□ -1.57
RPN13YLR421C GCR1P07261 785 aa5.26□□□□□ -1.57
RPN13YLR421C SLD2P34252 453 aa5.26□□□□□ -1.57
RPN13YLR421C RFC5P38251 354 aa5.26□□□□□ -1.57
RPN13YLR421C RGD1P38339 666 aa5.26□□□□□ -1.57
RPN13YLR421C TAT2P38967 592 aa5.26□□□□□ -1.57
RPN13YLR421C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
RPN13YLR421C SRM1P21827 482 aa5.25□□□□□ -1.57
RPN13YLR421C MGE1P38523 228 aa5.25□□□□□ -1.57
RPN13YLR421C CNN1P43618 361 aa5.25□□□□□ -1.57
RPN13YLR421C POL32P47110 350 aa5.25□□□□□ -1.57
RPN13YLR421C SPR28Q04921 423 aa5.25□□□□□ -1.57
RPN13YLR421C DUS4Q06063 367 aa5.25□□□□□ -1.57
RPN13YLR421C ENT3P47160 408 aa5.24□□□□□ -1.57
RPN13YLR421C GSF2Q04697 403 aaKnown RBP5.24□□□□□ -1.57
RPN13YLR421C SVS1Q12254 260 aa5.24□□□□□ -1.57
RPN13YLR421C RIB2Q12362 591 aaKnown RBP5.24□□□□□ -1.57
RPN13YLR421C TUB2P02557 457 aaKnown RBP5.23□□□□□ -1.57
RPN13YLR421C ATE1P16639 503 aa5.23□□□□□ -1.57
RPN13YLR421C DBP5P20449 482 aaKnown RBP5.23□□□□□ -1.57
RPN13YLR421C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
RPN13YLR421C APL1P27351 700 aa5.22□□□□□ -1.57
RPN13YLR421C FYV10P40492 516 aa5.22□□□□□ -1.57
RPN13YLR421C MCM7P38132 845 aa5.21□□□□□ -1.58
RPN13YLR421C MPH1P40562 993 aa5.21□□□□□ -1.58
RPN13YLR421C TMA10Q06177 86 aa5.21□□□□□ -1.58
RPN13YLR421C GPB1Q08886 897 aa5.21□□□□□ -1.58
RPN13YLR421C KIN2P13186 1147 aaKnown RBP5.2□□□□□ -1.58
RPN13YLR421C BAS1P22035 811 aa5.2□□□□□ -1.58
RPN13YLR421C CDC20P26309 610 aa5.2□□□□□ -1.58
RPN13YLR421C PEP7P32609 515 aa5.2□□□□□ -1.58
RPN13YLR421C DOM34P33309 386 aa5.2□□□□□ -1.58
RPN13YLR421C RER2P35196 286 aa5.2□□□□□ -1.58
RPN13YLR421C GTF1P53260 183 aaPredicted RBP5.2□□□□□ -1.58
RPN13YLR421C RXT3Q07458 294 aa5.2□□□□□ -1.58
RPN13YLR421C ACK1Q07622 623 aaPredicted RBP5.2□□□□□ -1.58
RPN13YLR421C MXR1P40029 184 aa5.19□□□□□ -1.58
RPN13YLR421C YJR107WP47145 328 aa5.19□□□□□ -1.58
RPN13YLR421C CDC6P09119 513 aa5.18□□□□□ -1.58
RPN13YLR421C LST4P34239 828 aa5.18□□□□□ -1.58
RPN13YLR421C GCV2P49095 1034 aa5.18□□□□□ -1.58
RPN13YLR421C PBP1P53297 722 aaKnown RBP5.18□□□□□ -1.58
RPN13YLR421C TIF35Q04067 274 aaKnown RBP5.18□□□□□ -1.58
RPN13YLR421C RAD27P26793 382 aa5.17□□□□□ -1.58
RPN13YLR421C UGA2P38067 497 aa5.17□□□□□ -1.58
RPN13YLR421C MCM6P53091 1017 aaKnown RBP5.17□□□□□ -1.58
RPN13YLR421C PNS1Q12412 539 aa5.17□□□□□ -1.58
RPN13YLR421C RPL11AP0C0W9 174 aaKnown RBP5.16□□□□□ -1.58
RPN13YLR421C TRM2P33753 639 aa5.16□□□□□ -1.58
RPN13YLR421C YAP6Q03935 383 aa5.16□□□□□ -1.58
RPN13YLR421C ESF1Q06344 628 aaKnown RBP5.16□□□□□ -1.58
RPN13YLR421C RRP15Q06511 250 aaPredicted RBP5.16□□□□□ -1.58
RPN13YLR421C RTT10Q08924 1013 aa5.16□□□□□ -1.58
RPN13YLR421C RPL11BQ3E757 174 aaPredicted RBP5.16□□□□□ -1.58
RPN13YLR421C ACE2P21192 770 aa5.15□□□□□ -1.59
RPN13YLR421C DBP2P24783 546 aaKnown RBP5.15□□□□□ -1.59
RPN13YLR421C HCM1P25364 564 aa5.15□□□□□ -1.59
RPN13YLR421C MNN10P50108 393 aaKnown RBP5.15□□□□□ -1.59
RPN13YLR421C SIZ1Q04195 904 aa5.15□□□□□ -1.59
RPN13YLR421C ATG13Q06628 738 aa5.15□□□□□ -1.59
RPN13YLR421C GNT1Q12096 491 aa5.15□□□□□ -1.59
RPN13YLR421C BI4P03879 638 aa5.14□□□□□ -1.59
RPN13YLR421C EMC1P25574 760 aa5.14□□□□□ -1.59
RPN13YLR421C VPS62P53285 467 aa5.14□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms