RNA–Protein interactions for RNA: YLR242C

ARV1, Transcript of Cortical ER protein, yeast

Gene ARV1, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ARV1	YLR242C	RCL1	Q08096	367 aa	Predicted RBP	4.27	□□□□□ -1.73
ARV1	YLR242C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
ARV1	YLR242C	PEP7	P32609	515 aa		4.26	□□□□□ -1.73
ARV1	YLR242C	MEF2	P39677	819 aa		4.26	□□□□□ -1.73
ARV1	YLR242C	SUN4	P53616	420 aa		4.26	□□□□□ -1.73
ARV1	YLR242C	CTF4	Q01454	927 aa		4.26	□□□□□ -1.73
ARV1	YLR242C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	RIP-Chip
ARV1	YLR242C	RMD1	Q03441	430 aa		4.26	□□□□□ -1.73
ARV1	YLR242C	SGD1	Q06132	899 aa		4.26	□□□□□ -1.73
ARV1	YLR242C	ESF1	Q06344	628 aa	Known RBP	4.26	□□□□□ -1.73
ARV1	YLR242C	GCR1	P07261	785 aa		4.25	□□□□□ -1.73
ARV1	YLR242C	TAF13	P11747	167 aa		4.25	□□□□□ -1.73
ARV1	YLR242C	ADD66	P36040	267 aa		4.25	□□□□□ -1.73
ARV1	YLR242C	LAM1	P38851	1228 aa		4.25	□□□□□ -1.73
ARV1	YLR242C	GNP1	P48813	663 aa		4.25	□□□□□ -1.73
ARV1	YLR242C	GCN5	Q03330	439 aa		4.25	□□□□□ -1.73
ARV1	YLR242C	EST2	Q06163	884 aa		4.25	□□□□□ -1.73
ARV1	YLR242C	HRK1	Q08732	759 aa	Known RBP	4.25	□□□□□ -1.73
ARV1	YLR242C	AFG2	P32794	780 aa		4.24	□□□□□ -1.73
ARV1	YLR242C	QNS1	P38795	714 aa	Known RBP	4.24	□□□□□ -1.73
ARV1	YLR242C	HXT13	P39924	564 aa		4.24	□□□□□ -1.73
ARV1	YLR242C	HXT17	P53631	564 aa		4.24	□□□□□ -1.73
ARV1	YLR242C	HXT15	P54854	567 aa		4.24	□□□□□ -1.73
ARV1	YLR242C	ROD1	Q02805	837 aa		4.24	□□□□□ -1.73
ARV1	YLR242C	RKM2	Q03942	479 aa		4.24	□□□□□ -1.73
ARV1	YLR242C	RAD53	P22216	821 aa		4.23	□□□□□ -1.73
ARV1	YLR242C	HCM1	P25364	564 aa		4.23	□□□□□ -1.73
ARV1	YLR242C	ENV11	P53246	860 aa		4.23	□□□□□ -1.73
ARV1	YLR242C	SIW14	P53965	281 aa		4.23	□□□□□ -1.73
ARV1	YLR242C	LAP2	Q10740	671 aa		4.23	□□□□□ -1.73
ARV1	YLR242C	DED1	P06634	604 aa	Known RBP	4.22	□□□□□ -1.73
ARV1	YLR242C	SPS1	P08458	490 aa		4.22	□□□□□ -1.73
ARV1	YLR242C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
ARV1	YLR242C	SRO9	P25567	434 aa	Known RBP	4.22	□□□□□ -1.73
ARV1	YLR242C	YSC84	P32793	468 aa		4.22	□□□□□ -1.73
ARV1	YLR242C	URN1	Q06525	465 aa	Known RBP	4.22	□□□□□ -1.73
ARV1	YLR242C	MRL1	Q06815	381 aa		4.22	□□□□□ -1.73
ARV1	YLR242C	RSC58	Q07979	502 aa		4.22	□□□□□ -1.73
ARV1	YLR242C	ATG14	P38270	344 aa		4.21	□□□□□ -1.74
ARV1	YLR242C	HSE1	P38753	452 aa		4.21	□□□□□ -1.74
ARV1	YLR242C	GPB2	P39717	880 aa		4.21	□□□□□ -1.74
ARV1	YLR242C	ENT3	P47160	408 aa		4.21	□□□□□ -1.74
ARV1	YLR242C	RTT10	Q08924	1013 aa		4.21	□□□□□ -1.74
ARV1	YLR242C	MKK2	P32491	506 aa		4.2	□□□□□ -1.74
ARV1	YLR242C	DUT1	P33317	147 aa		4.2	□□□□□ -1.74
ARV1	YLR242C	AIM21	P40563	679 aa		4.2	□□□□□ -1.74
ARV1	YLR242C	VPS53	P47061	822 aa		4.2	□□□□□ -1.74
ARV1	YLR242C	SNU71	P53207	620 aa	Known RBP	4.2	□□□□□ -1.74
ARV1	YLR242C	RAT1	Q02792	1006 aa	Known RBP	4.2	□□□□□ -1.74
ARV1	YLR242C	SPO21	Q12411	609 aa		4.2	□□□□□ -1.74
ARV1	YLR242C	KIP1	P28742	1111 aa		4.19	□□□□□ -1.74
ARV1	YLR242C	PET112	P33893	541 aa		4.19	□□□□□ -1.74
ARV1	YLR242C	RER2	P35196	286 aa		4.19	□□□□□ -1.74
ARV1	YLR242C	MNR2	P35724	969 aa		4.19	□□□□□ -1.74
ARV1	YLR242C	ALG3	P38179	458 aa		4.19	□□□□□ -1.74
ARV1	YLR242C	HNT2	P49775	206 aa		4.19	□□□□□ -1.74
ARV1	YLR242C	ROT1	Q03691	256 aa		4.19	□□□□□ -1.74
ARV1	YLR242C	NBA1	Q08229	501 aa	Known RBP	4.19	□□□□□ -1.74
ARV1	YLR242C	PTC5	Q12511	572 aa		4.19	□□□□□ -1.74
ARV1	YLR242C	CDC34	P14682	295 aa		4.18	□□□□□ -1.74
ARV1	YLR242C	RAD27	P26793	382 aa		4.18	□□□□□ -1.74
ARV1	YLR242C	YFL054C	P43549	646 aa		4.18	□□□□□ -1.74
ARV1	YLR242C	MNN10	P50108	393 aa	Known RBP	4.18	□□□□□ -1.74
ARV1	YLR242C	MCM6	P53091	1017 aa	Known RBP	4.18	□□□□□ -1.74
ARV1	YLR242C	PLB2	Q03674	706 aa		4.18	□□□□□ -1.74
ARV1	YLR242C	NTO1	Q12311	748 aa		4.18	□□□□□ -1.74
ARV1	YLR242C	CYC1	P00044	109 aa	Predicted RBP	4.17	□□□□□ -1.74
ARV1	YLR242C	SNF5	P18480	905 aa		4.17	□□□□□ -1.74
ARV1	YLR242C	SYP1	P25623	870 aa	Known RBP	4.17	□□□□□ -1.74
ARV1	YLR242C	PMI40	P29952	429 aa	Known RBP	4.17	□□□□□ -1.74
ARV1	YLR242C	DOM34	P33309	386 aa		4.17	□□□□□ -1.74
ARV1	YLR242C	PAM1	P37304	830 aa	Known RBP	4.17	□□□□□ -1.74
ARV1	YLR242C	BAP2	P38084	609 aa		4.17	□□□□□ -1.74
ARV1	YLR242C	MET10	P39692	1035 aa		4.17	□□□□□ -1.74
ARV1	YLR242C	SNM1	P40993	198 aa		4.17	□□□□□ -1.74
ARV1	YLR242C	EEB1	Q02891	456 aa		4.17	□□□□□ -1.74
ARV1	YLR242C	SVF1	Q05515	481 aa		4.17	□□□□□ -1.74
ARV1	YLR242C	TMA46	Q12000	345 aa	Known RBP	4.17	□□□□□ -1.74
ARV1	YLR242C	COQ4	O13525	335 aa		4.15	□□□□□ -1.75
ARV1	YLR242C	DBP5	P20449	482 aa	Known RBP	4.15	□□□□□ -1.75
ARV1	YLR242C	SRM1	P21827	482 aa		4.15	□□□□□ -1.75
ARV1	YLR242C	MPH1	P40562	993 aa		4.15	□□□□□ -1.75
ARV1	YLR242C	CNN1	P43618	361 aa		4.15	□□□□□ -1.75
ARV1	YLR242C	YGR053C	P53234	283 aa		4.15	□□□□□ -1.75
ARV1	YLR242C	VPS16	Q03308	798 aa		4.15	□□□□□ -1.75
ARV1	YLR242C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
ARV1	YLR242C	TIF35	Q04067	274 aa	Known RBP	4.15	□□□□□ -1.75
ARV1	YLR242C	DUS4	Q06063	367 aa		4.15	□□□□□ -1.75
ARV1	YLR242C	JIP5	Q06214	492 aa	Predicted RBP	4.15	□□□□□ -1.75
ARV1	YLR242C	YPL260W	Q08977	551 aa		4.15	□□□□□ -1.75
ARV1	YLR242C	PIN2	Q12057	282 aa		4.15	□□□□□ -1.75
ARV1	YLR242C	RIB2	Q12362	591 aa	Known RBP	4.15	□□□□□ -1.75
ARV1	YLR242C	MLS1	P30952	554 aa		4.14	□□□□□ -1.75
ARV1	YLR242C	RGD1	P38339	666 aa		4.14	□□□□□ -1.75
ARV1	YLR242C	FAA4	P47912	694 aa	Known RBP	4.14	□□□□□ -1.75
ARV1	YLR242C	TMA10	Q06177	86 aa		4.14	□□□□□ -1.75
ARV1	YLR242C	TRP2	P00899	507 aa	Known RBP	4.13	□□□□□ -1.75
ARV1	YLR242C	YER152C	P10356	443 aa		4.13	□□□□□ -1.75
ARV1	YLR242C	CLN2	P20438	545 aa		4.13	□□□□□ -1.75
ARV1	YLR242C	STE11	P23561	717 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms