RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W MRL1Q06815 381 aa2.9□□□□□ -1.94
CFT2YLR115W ETP1P38748 585 aaKnown RBP2.9□□□□□ -1.95
CFT2YLR115W PRP43P53131 767 aaKnown RBP2.9□□□□□ -1.95
CFT2YLR115W MRPL22P53881 309 aa2.9□□□□□ -1.95
CFT2YLR115W HOS3Q02959 697 aaKnown RBP2.9□□□□□ -1.95
CFT2YLR115W PRP6P19735 899 aaPredicted RBP2.89□□□□□ -1.95
CFT2YLR115W SYP1P25623 870 aaKnown RBP2.89□□□□□ -1.95
CFT2YLR115W AIM26P32858 118 aa2.89□□□□□ -1.95
CFT2YLR115W RER2P35196 286 aa2.89□□□□□ -1.95
CFT2YLR115W RPN3P40016 523 aaKnown RBP2.89□□□□□ -1.95
CFT2YLR115W MPH1P40562 993 aa2.89□□□□□ -1.95
CFT2YLR115W ESF1Q06344 628 aaKnown RBP2.89□□□□□ -1.95
CFT2YLR115W YPL260WQ08977 551 aa2.89□□□□□ -1.95
CFT2YLR115W YER152CP10356 443 aa2.89□□□□□ -1.95
CFT2YLR115W OYE2Q03558 400 aaKnown RBP2.89□□□□□ -1.95
CFT2YLR115W SPO21Q12411 609 aa2.89□□□□□ -1.95
CFT2YLR115W DBP5P20449 482 aaKnown RBP2.88□□□□□ -1.95
CFT2YLR115W MLS1P30952 554 aa2.88□□□□□ -1.95
CFT2YLR115W RGD1P38339 666 aa2.88□□□□□ -1.95
CFT2YLR115W CNN1P43618 361 aa2.88□□□□□ -1.95
CFT2YLR115W ASF1P32447 279 aa2.88□□□□□ -1.95
CFT2YLR115W RMD1Q03441 430 aa2.88□□□□□ -1.95
CFT2YLR115W TIF35Q04067 274 aaKnown RBP2.88□□□□□ -1.95
CFT2YLR115W RTT10Q08924 1013 aa2.88□□□□□ -1.95
CFT2YLR115W AIM3P38266 947 aaKnown RBP2.87□□□□□ -1.95
CFT2YLR115W PIK1P39104 1066 aa2.87□□□□□ -1.95
CFT2YLR115W TNA1P53322 534 aa2.87□□□□□ -1.95
CFT2YLR115W EEB1Q02891 456 aa2.87□□□□□ -1.95
CFT2YLR115W TY1B-DR4Q07793 1604 aa2.87□□□□□ -1.95
CFT2YLR115W SPS1P08458 490 aa2.87□□□□□ -1.95
CFT2YLR115W CCZ1P38273 704 aa2.87□□□□□ -1.95
CFT2YLR115W TAF1P46677 1066 aa2.87□□□□□ -1.95
CFT2YLR115W RIB2Q12362 591 aaKnown RBP2.87□□□□□ -1.95
CFT2YLR115W COQ4O13525 335 aa2.86□□□□□ -1.95
CFT2YLR115W CDC34P14682 295 aa2.86□□□□□ -1.95
CFT2YLR115W SRM1P21827 482 aa2.86□□□□□ -1.95
CFT2YLR115W DBP2P24783 546 aaKnown RBP2.86□□□□□ -1.95
CFT2YLR115W NBA1Q08229 501 aaKnown RBP2.86□□□□□ -1.95
CFT2YLR115W SOD2P00447 233 aa2.86□□□□□ -1.95
CFT2YLR115W PEP7P32609 515 aa2.86□□□□□ -1.95
CFT2YLR115W MET10P39692 1035 aa2.86□□□□□ -1.95
CFT2YLR115W SEC26P41810 973 aaKnown RBP2.86□□□□□ -1.95
CFT2YLR115W SNO2P53823 222 aa2.86□□□□□ -1.95
CFT2YLR115W UBP3Q01477 912 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
CFT2YLR115W YPL066WQ12194 479 aa2.86□□□□□ -1.95
CFT2YLR115W REV3P14284 1504 aa2.86□□□□□ -1.95
CFT2YLR115W YDR132CQ03900 495 aa2.85□□□□□ -1.95
CFT2YLR115W YPL277CQ08989 487 aa2.85□□□□□ -1.95
CFT2YLR115W TRP2P00899 507 aaKnown RBP2.85□□□□□ -1.95
CFT2YLR115W RPS13P05756 151 aaKnown RBP2.85□□□□□ -1.95
CFT2YLR115W YCR015CP25616 317 aa2.85□□□□□ -1.95
CFT2YLR115W MXR1P40029 184 aa2.85□□□□□ -1.95
CFT2YLR115W YGR053CP53234 283 aa2.85□□□□□ -1.95
CFT2YLR115W PLB2Q03674 706 aa2.85□□□□□ -1.95
CFT2YLR115W ESC8Q08119 714 aa2.85□□□□□ -1.95
CFT2YLR115W TMA46Q12000 345 aaKnown RBP2.85□□□□□ -1.95
CFT2YLR115W CYC1P00044 109 aaPredicted RBP2.84□□□□□ -1.95
CFT2YLR115W RPL11AP0C0W9 174 aaKnown RBP2.84□□□□□ -1.95
CFT2YLR115W PUF4P25339 888 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95 RIP-Chip
CFT2YLR115W PET112P33893 541 aa2.84□□□□□ -1.95
CFT2YLR115W FLR1P38124 548 aa2.84□□□□□ -1.95
CFT2YLR115W RIM8P53179 542 aa2.84□□□□□ -1.95
CFT2YLR115W NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
CFT2YLR115W RPL11BQ3E757 174 aaPredicted RBP2.84□□□□□ -1.95
CFT2YLR115W HNT2P49775 206 aa2.84□□□□□ -1.96
CFT2YLR115W ENV11P53246 860 aa2.84□□□□□ -1.96
CFT2YLR115W ATG13Q06628 738 aa2.84□□□□□ -1.96
CFT2YLR115W GNT1Q12096 491 aa2.84□□□□□ -1.96
CFT2YLR115W MNR2P35724 969 aa2.83□□□□□ -1.96
CFT2YLR115W PNT1P38969 423 aa2.83□□□□□ -1.96
CFT2YLR115W FOL2P51601 243 aaKnown RBP2.83□□□□□ -1.96
CFT2YLR115W TYW3P53177 273 aa2.83□□□□□ -1.96
CFT2YLR115W DUS4Q06063 367 aa2.83□□□□□ -1.96
CFT2YLR115W CDC6P09119 513 aa2.83□□□□□ -1.96
CFT2YLR115W BAS1P22035 811 aa2.83□□□□□ -1.96
CFT2YLR115W LYP1P32487 611 aa2.83□□□□□ -1.96
CFT2YLR115W SLA2P33338 968 aa2.83□□□□□ -1.96
CFT2YLR115W TOD6P34219 525 aa2.83□□□□□ -1.96
CFT2YLR115W LAM1P38851 1228 aa2.83□□□□□ -1.96
CFT2YLR115W MEF2P39677 819 aa2.83□□□□□ -1.96
CFT2YLR115W SIP5P40210 489 aaKnown RBP2.83□□□□□ -1.96
CFT2YLR115W SGD1Q06132 899 aa2.83□□□□□ -1.96
CFT2YLR115W RSB1Q08417 382 aa2.83□□□□□ -1.96
CFT2YLR115W ACE2P21192 770 aa2.82□□□□□ -1.96
CFT2YLR115W RAD27P26793 382 aa2.82□□□□□ -1.96
CFT2YLR115W UGA2P38067 497 aa2.82□□□□□ -1.96
CFT2YLR115W MCM7P38132 845 aa2.82□□□□□ -1.96
CFT2YLR115W RFC5P38251 354 aa2.82□□□□□ -1.96
CFT2YLR115W MTC3P53077 123 aa2.82□□□□□ -1.96
CFT2YLR115W PRE10P21242 288 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
CFT2YLR115W MAP1Q01662 387 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
CFT2YLR115W GCN5Q03330 439 aa2.82□□□□□ -1.96
CFT2YLR115W SIZ1Q04195 904 aa2.82□□□□□ -1.96
CFT2YLR115W ESC2Q06340 456 aa2.82□□□□□ -1.96
CFT2YLR115W ACM1Q08981 209 aa2.82□□□□□ -1.96
CFT2YLR115W SVS1Q12254 260 aa2.82□□□□□ -1.96
CFT2YLR115W BI4P03879 638 aa2.81□□□□□ -1.96
CFT2YLR115W MOT2P34909 587 aaKnown RBP2.81□□□□□ -1.96
CFT2YLR115W GIP4P39732 760 aa2.81□□□□□ -1.96
CFT2YLR115W FAA4P47912 694 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms