RNA–Protein interactions for RNA: YLR062C

BUD28, Transcript of Dubious open reading frame, yeast

Gene BUD28, Length 378 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BUD28	YLR062C	YOR111W	Q99210	232 aa		5.83	□□□□□ -1.48
BUD28	YLR062C	POX1	P13711	748 aa		5.82	□□□□□ -1.48
BUD28	YLR062C	RNR3	P21672	869 aa	Known RBP	5.82	□□□□□ -1.48
BUD28	YLR062C	SEC20	P28791	383 aa		5.82	□□□□□ -1.48
BUD28	YLR062C	SEC8	P32855	1065 aa		5.82	□□□□□ -1.48
BUD28	YLR062C	DLD1	P32891	587 aa		5.82	□□□□□ -1.48
BUD28	YLR062C	KTR2	P33550	425 aa		5.82	□□□□□ -1.48
BUD28	YLR062C	AIM9	P40053	627 aa	Known RBP	5.82	□□□□□ -1.48
BUD28	YLR062C	SKP2	P42843	763 aa		5.82	□□□□□ -1.48
BUD28	YLR062C	YFL040W	P43562	540 aa		5.82	□□□□□ -1.48
BUD28	YLR062C	VPS53	P47061	822 aa		5.82	□□□□□ -1.48
BUD28	YLR062C	CTR1	P49573	406 aa		5.82	□□□□□ -1.48
BUD28	YLR062C	LIF1	P53150	421 aa		5.82	□□□□□ -1.48
BUD28	YLR062C	ATF2	P53296	535 aa		5.82	□□□□□ -1.48
BUD28	YLR062C	PTA1	Q01329	785 aa	Predicted RBP	5.82	□□□□□ -1.48
BUD28	YLR062C	VIP1	Q06685	1146 aa	Known RBP	5.82	□□□□□ -1.48
BUD28	YLR062C	TRM11	Q12463	433 aa		5.82	□□□□□ -1.48
BUD28	YLR062C	RKM4	Q12504	494 aa		5.82	□□□□□ -1.48
BUD28	YLR062C	RIF1	P29539	1916 aa		5.82	□□□□□ -1.48
BUD28	YLR062C	TY1B-A	O13527	1196 aa	Known RBP	5.81	□□□□□ -1.48
BUD28	YLR062C	PDC1	P06169	563 aa	Known RBP	5.81	□□□□□ -1.48
BUD28	YLR062C	UGA4	P32837	571 aa		5.81	□□□□□ -1.48
BUD28	YLR062C	TIM23	P32897	222 aa		5.81	□□□□□ -1.48
BUD28	YLR062C	TPM2	P40414	161 aa		5.81	□□□□□ -1.48
BUD28	YLR062C	SPO22	P40511	975 aa		5.81	□□□□□ -1.48
BUD28	YLR062C	CDC73	Q06697	393 aa		5.81	□□□□□ -1.48
BUD28	YLR062C	BMT6	Q12291	365 aa		5.81	□□□□□ -1.48
BUD28	YLR062C	RPL8A	P17076	256 aa	Known RBP	5.8	□□□□□ -1.48
BUD28	YLR062C	PAN5	P38787	379 aa		5.8	□□□□□ -1.48
BUD28	YLR062C	ORC6	P38826	435 aa		5.8	□□□□□ -1.48
BUD28	YLR062C	AKR1	P39010	764 aa		5.8	□□□□□ -1.48
BUD28	YLR062C	VID28	P40547	921 aa		5.8	□□□□□ -1.48
BUD28	YLR062C	ASE1	P50275	885 aa		5.8	□□□□□ -1.48
BUD28	YLR062C	DAK1	P54838	584 aa	Known RBP	5.8	□□□□□ -1.48
BUD28	YLR062C	MPC54	Q08550	464 aa		5.8	□□□□□ -1.48
BUD28	YLR062C	CIT1	P00890	479 aa		5.79	□□□□□ -1.48
BUD28	YLR062C	TRL1	P09880	827 aa	Known RBP	5.79	□□□□□ -1.48
BUD28	YLR062C	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.79	□□□□□ -1.48	not detected
BUD28	YLR062C	MIP1	P15801	1254 aa		5.79	□□□□□ -1.48
BUD28	YLR062C	PWP2	P25635	923 aa	Known RBP	5.79	□□□□□ -1.48
BUD28	YLR062C	PSE1	P32337	1089 aa	Known RBP	5.79	□□□□□ -1.48
BUD28	YLR062C	FBP26	P32604	452 aa		5.79	□□□□□ -1.48
BUD28	YLR062C	EAR1	Q03212	550 aa		5.79	□□□□□ -1.48
BUD28	YLR062C	YDR341C	Q05506	607 aa	Known RBP	5.79	□□□□□ -1.48
BUD28	YLR062C	MET6	P05694	767 aa	Known RBP	5.78	□□□□□ -1.48
BUD28	YLR062C	HEM1	P09950	548 aa	Predicted RBP	5.78	□□□□□ -1.48
BUD28	YLR062C	GPT2	P36148	743 aa		5.78	□□□□□ -1.48
BUD28	YLR062C	FLR1	P38124	548 aa		5.78	□□□□□ -1.48
BUD28	YLR062C	CCT3	P39077	534 aa	Known RBP	5.78	□□□□□ -1.48
BUD28	YLR062C	YVH1	Q02256	364 aa	Known RBP	5.78	□□□□□ -1.48
BUD28	YLR062C	RTP1	Q12751	981 aa		5.78	□□□□□ -1.48
BUD28	YLR062C	YDR524C-B	Q3E6R4	66 aa		5.78	□□□□□ -1.48
BUD28	YLR062C	MAS2	P11914	482 aa		5.77	□□□□□ -1.49
BUD28	YLR062C	SIS2	P36024	562 aa		5.77	□□□□□ -1.49
BUD28	YLR062C	RXT2	P38255	430 aa		5.77	□□□□□ -1.49
BUD28	YLR062C	SUL1	P38359	859 aa		5.77	□□□□□ -1.49
BUD28	YLR062C	PCI8	P40512	444 aa		5.77	□□□□□ -1.49
BUD28	YLR062C	KRI1	P42846	591 aa	Known RBP	5.77	□□□□□ -1.49
BUD28	YLR062C	EPL1	P43572	832 aa		5.77	□□□□□ -1.49
BUD28	YLR062C	RPS7B	P48164	190 aa	Known RBP	5.77	□□□□□ -1.49
BUD28	YLR062C	WHI4	Q07655	649 aa	Known RBP	5.77	□□□□□ -1.49
BUD28	YLR062C	OXR1	Q08952	273 aa		5.77	□□□□□ -1.49
BUD28	YLR062C	ARP6	Q12509	438 aa		5.77	□□□□□ -1.49
BUD28	YLR062C	HIP1	P06775	603 aa		5.76	□□□□□ -1.49
BUD28	YLR062C	SES1	P07284	462 aa	Known RBP	5.76	□□□□□ -1.49
BUD28	YLR062C	MATALPHA2	P0CY08	210 aa		5.76	□□□□□ -1.49
BUD28	YLR062C	HMLALPHA2	P0CY09	210 aa		5.76	□□□□□ -1.49
BUD28	YLR062C	SNA3	P14359	133 aa		5.76	□□□□□ -1.49
BUD28	YLR062C	SWI4	P25302	1093 aa	Known RBP	5.76	□□□□□ -1.49
BUD28	YLR062C	BMH2	P34730	273 aa	Known RBP	5.76	□□□□□ -1.49
BUD28	YLR062C	GRS1	P38088	690 aa	Known RBP	5.76	□□□□□ -1.49
BUD28	YLR062C	OPY1	P38271	328 aa		5.76	□□□□□ -1.49
BUD28	YLR062C	UBP15	P50101	1230 aa		5.76	□□□□□ -1.49
BUD28	YLR062C	YGL138C	P53122	345 aa		5.76	□□□□□ -1.49
BUD28	YLR062C	ORC4	P54791	529 aa		5.76	□□□□□ -1.49
BUD28	YLR062C	ELP4	Q02884	456 aa	Known RBP	5.76	□□□□□ -1.49
BUD28	YLR062C	ATG11	Q12527	1178 aa		5.76	□□□□□ -1.49
BUD28	YLR062C	KIN82	P25341	720 aa		5.75	□□□□□ -1.49
BUD28	YLR062C	UBP11	P36026	717 aa		5.75	□□□□□ -1.49
BUD28	YLR062C	YKE2	P52553	114 aa		5.75	□□□□□ -1.49
BUD28	YLR062C	NMA111	P53920	997 aa		5.75	□□□□□ -1.49
BUD28	YLR062C	ARP5	P53946	755 aa		5.75	□□□□□ -1.49
BUD28	YLR062C	VPS72	Q03388	795 aa		5.75	□□□□□ -1.49
BUD28	YLR062C	MSC2	Q03455	724 aa		5.75	□□□□□ -1.49
BUD28	YLR062C	OYE2	Q03558	400 aa	Known RBP	5.75	□□□□□ -1.49
BUD28	YLR062C	YLL058W	Q12198	575 aa		5.75	□□□□□ -1.49
BUD28	YLR062C	RGR1	P19263	1082 aa		5.74	□□□□□ -1.49
BUD28	YLR062C	HCA4	P20448	770 aa	Known RBP	5.74	□□□□□ -1.49
BUD28	YLR062C	SRO9	P25567	434 aa	Known RBP	5.74	□□□□□ -1.49
BUD28	YLR062C	POT1	P27796	417 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
BUD28	YLR062C	CLB5	P30283	435 aa		5.74	□□□□□ -1.49
BUD28	YLR062C	DUR3	P33413	735 aa		5.74	□□□□□ -1.49
BUD28	YLR062C	TVP38	P36164	337 aa		5.74	□□□□□ -1.49
BUD28	YLR062C	ISW1	P38144	1129 aa		5.74	□□□□□ -1.49
BUD28	YLR062C	MSC7	P38694	644 aa		5.74	□□□□□ -1.49
BUD28	YLR062C	RPN10	P38886	268 aa	Known RBP	5.74	□□□□□ -1.49
BUD28	YLR062C	HMF1	P40037	129 aa	Known RBP	5.74	□□□□□ -1.49
BUD28	YLR062C	MVP1	P40959	511 aa	Known RBP	5.74	□□□□□ -1.49
BUD28	YLR062C	AZR1	P50080	613 aa		5.74	□□□□□ -1.49
BUD28	YLR062C	HAP5	Q02516	242 aa		5.74	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 140.5 ms