RNA–Protein interactions for RNA: YKL125W

RRN3, Transcript of Protein required for transcription of rDNA by RNA polymerase I, yeast

Gene RRN3, Length 1,884 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRN3	YKL125W	LSC1	P53598	329 aa	Known RBP	5.75	□□□□□ -1.49
RRN3	YKL125W	COP1	P53622	1201 aa	Known RBP	5.75	□□□□□ -1.49
RRN3	YKL125W	SGT2	Q12118	346 aa	Known RBP	5.75	□□□□□ -1.49
RRN3	YKL125W	ADE3	P07245	946 aa	Known RBP	5.74	□□□□□ -1.49
RRN3	YKL125W	TYR1	P20049	452 aa		5.74	□□□□□ -1.49
RRN3	YKL125W	RPO26	P20435	155 aa		5.74	□□□□□ -1.49
RRN3	YKL125W	UBC1	P21734	215 aa	Known RBP	5.74	□□□□□ -1.49
RRN3	YKL125W	PEP12	P32854	288 aa		5.74	□□□□□ -1.49
RRN3	YKL125W	SMY2	P32909	740 aa	Known RBP	5.74	□□□□□ -1.49
RRN3	YKL125W	ARC19	P33204	171 aa	Known RBP	5.74	□□□□□ -1.49
RRN3	YKL125W	HXT5	P38695	592 aa		5.74	□□□□□ -1.49
RRN3	YKL125W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
RRN3	YKL125W	GCD14	P46959	383 aa	Predicted RBP	5.74	□□□□□ -1.49
RRN3	YKL125W	ZDS1	P50111	915 aa	Known RBP	5.74	□□□□□ -1.49
RRN3	YKL125W	HXT17	P53631	564 aa		5.74	□□□□□ -1.49
RRN3	YKL125W	SFB2	P53953	876 aa		5.74	□□□□□ -1.49
RRN3	YKL125W	TFB2	Q02939	513 aa		5.74	□□□□□ -1.49
RRN3	YKL125W	CWC15	Q03772	175 aa	Known RBP	5.74	□□□□□ -1.49
RRN3	YKL125W	MGR3	Q04472	501 aa		5.74	□□□□□ -1.49
RRN3	YKL125W	HSP42	Q12329	375 aa		5.74	□□□□□ -1.49
RRN3	YKL125W	HTZ1	Q12692	134 aa	Known RBP	5.74	□□□□□ -1.49
RRN3	YKL125W	VAS1	P07806	1104 aa	Known RBP	5.73	□□□□□ -1.49
RRN3	YKL125W	TAL1	P15019	335 aa	Known RBP	5.73	□□□□□ -1.49
RRN3	YKL125W	MUM2	P38236	366 aa		5.73	□□□□□ -1.49
RRN3	YKL125W	NMD3	P38861	518 aa	Known RBP	5.73	□□□□□ -1.49
RRN3	YKL125W	MRX1	P40050	688 aa		5.73	□□□□□ -1.49
RRN3	YKL125W	HUL4	P40985	892 aa		5.73	□□□□□ -1.49
RRN3	YKL125W	MID1	P41821	548 aa		5.73	□□□□□ -1.49
RRN3	YKL125W	ARI1	P53111	347 aa	Known RBP	5.73	□□□□□ -1.49
RRN3	YKL125W	ESF2	P53743	316 aa	Known RBP	5.73	□□□□□ -1.49
RRN3	YKL125W	NKP2	Q06162	153 aa		5.73	□□□□□ -1.49
RRN3	YKL125W	CLP1	Q08685	445 aa	Predicted RBP	5.73	□□□□□ -1.49
RRN3	YKL125W	ISU2	Q12056	156 aa		5.73	□□□□□ -1.49
RRN3	YKL125W	GPR1	Q12361	961 aa		5.73	□□□□□ -1.49
RRN3	YKL125W	YOL098C	Q12496	1037 aa		5.73	□□□□□ -1.49
RRN3	YKL125W	HCA4	P20448	770 aa	Known RBP	5.73	□□□□□ -1.49
RRN3	YKL125W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.73	□□□□□ -1.49	not detected
RRN3	YKL125W	ACP1	P32463	125 aa		5.73	□□□□□ -1.49
RRN3	YKL125W	NPL6	P32832	435 aa		5.73	□□□□□ -1.49
RRN3	YKL125W	REI1	P38344	393 aa	Predicted RBP	5.73	□□□□□ -1.49
RRN3	YKL125W	SIP3	P38717	1229 aa		5.73	□□□□□ -1.49
RRN3	YKL125W	VPS8	P39702	1274 aa		5.73	□□□□□ -1.49
RRN3	YKL125W	JJJ2	P46997	583 aa		5.73	□□□□□ -1.49
RRN3	YKL125W	RPA14	P50106	137 aa		5.73	□□□□□ -1.49
RRN3	YKL125W	FMS1	P50264	508 aa		5.73	□□□□□ -1.49
RRN3	YKL125W	RRP46	P53256	223 aa	Predicted RBP	5.73	□□□□□ -1.49
RRN3	YKL125W	PUS6	P53294	404 aa		5.73	□□□□□ -1.49
RRN3	YKL125W	YGR266W	P53326	701 aa		5.73	□□□□□ -1.49
RRN3	YKL125W	YKR005C	Q02203	525 aa		5.73	□□□□□ -1.49
RRN3	YKL125W	PMT7	Q06644	662 aa		5.73	□□□□□ -1.49
RRN3	YKL125W	APC5	Q08683	685 aa		5.73	□□□□□ -1.49
RRN3	YKL125W	SNT2	P53127	1403 aa		5.72	□□□□□ -1.49
RRN3	YKL125W	PHO84	P25297	587 aa	Known RBP	5.72	□□□□□ -1.49
RRN3	YKL125W	STE5	P32917	917 aa		5.72	□□□□□ -1.49
RRN3	YKL125W	PEX5	P35056	612 aa		5.72	□□□□□ -1.49
RRN3	YKL125W	KEL2	P50090	882 aa		5.72	□□□□□ -1.49
RRN3	YKL125W	IMD4	P50094	524 aa	Known RBP	5.72	□□□□□ -1.49
RRN3	YKL125W	LSG1	P53145	640 aa	Known RBP	5.72	□□□□□ -1.49
RRN3	YKL125W	UTP22	P53254	1237 aa	Predicted RBP	5.72	□□□□□ -1.49
RRN3	YKL125W	SEN54	Q02825	467 aa	Predicted RBP	5.72	□□□□□ -1.49
RRN3	YKL125W	SGD1	Q06132	899 aa		5.72	□□□□□ -1.49
RRN3	YKL125W	SMD2	Q06217	110 aa	Known RBP	5.72	□□□□□ -1.49
RRN3	YKL125W	YLH47	Q06493	454 aa		5.72	□□□□□ -1.49
RRN3	YKL125W	APL4	Q12028	832 aa		5.72	□□□□□ -1.49
RRN3	YKL125W	YRF1-4	O13559	1382 aa		5.71	□□□□□ -1.49
RRN3	YKL125W	SSK22	P25390	1331 aa	Predicted RBP	5.71	□□□□□ -1.49
RRN3	YKL125W	RNR2	P09938	399 aa	Known RBP	5.71	□□□□□ -1.5
RRN3	YKL125W	HEM1	P09950	548 aa	Predicted RBP	5.71	□□□□□ -1.5
RRN3	YKL125W	SSC1	P0CS90	654 aa	Known RBP	5.71	□□□□□ -1.5
RRN3	YKL125W	RSR1	P13856	272 aa		5.71	□□□□□ -1.5
RRN3	YKL125W	SEN2	P16658	377 aa		5.71	□□□□□ -1.5
RRN3	YKL125W	DPB3	P27344	201 aa		5.71	□□□□□ -1.5
RRN3	YKL125W	RAD5	P32849	1169 aa	Predicted RBP	5.71	□□□□□ -1.5
RRN3	YKL125W	KES1	P35844	434 aa	Known RBP	5.71	□□□□□ -1.5
RRN3	YKL125W	ETP1	P38748	585 aa	Known RBP	5.71	□□□□□ -1.5
RRN3	YKL125W	ARB1	P40024	610 aa	Known RBP	5.71	□□□□□ -1.5
RRN3	YKL125W	ALG2	P43636	503 aa		5.71	□□□□□ -1.5
RRN3	YKL125W	RTC4	P53850	401 aa		5.71	□□□□□ -1.5
RRN3	YKL125W	MUB1	Q03162	620 aa		5.71	□□□□□ -1.5
RRN3	YKL125W	PML39	Q03760	334 aa		5.71	□□□□□ -1.5
RRN3	YKL125W	YPQ2	Q06328	317 aa		5.71	□□□□□ -1.5
RRN3	YKL125W	TMA16	Q08687	178 aa		5.71	□□□□□ -1.5
RRN3	YKL125W	CEX1	Q12453	761 aa		5.71	□□□□□ -1.5
RRN3	YKL125W	YPR089W	O13585	888 aa		5.71	□□□□□ -1.5
RRN3	YKL125W	RDS2	P19541	446 aa	Known RBP	5.71	□□□□□ -1.5
RRN3	YKL125W	HSP78	P33416	811 aa		5.71	□□□□□ -1.5
RRN3	YKL125W	OCT1	P35999	772 aa		5.71	□□□□□ -1.5
RRN3	YKL125W	YBR242W	P38331	238 aa		5.71	□□□□□ -1.5
RRN3	YKL125W	RTS1	P38903	757 aa		5.71	□□□□□ -1.5
RRN3	YKL125W	REV7	P38927	245 aa		5.71	□□□□□ -1.5
RRN3	YKL125W	ULI1	P43604	169 aa		5.71	□□□□□ -1.5
RRN3	YKL125W	STR2	P47164	639 aa		5.71	□□□□□ -1.5
RRN3	YKL125W	PCL10	P53124	433 aa		5.71	□□□□□ -1.5
RRN3	YKL125W	DML1	Q03652	475 aa		5.71	□□□□□ -1.5
RRN3	YKL125W	RSM24	Q03976	319 aa		5.71	□□□□□ -1.5
RRN3	YKL125W	PPM1	Q04081	328 aa		5.71	□□□□□ -1.5
RRN3	YKL125W	SXM1	Q04175	944 aa	Known RBP	5.71	□□□□□ -1.5
RRN3	YKL125W	DCS1	Q06151	350 aa		5.71	□□□□□ -1.5
RRN3	YKL125W	SPP382	Q06411	708 aa	Predicted RBP	5.71	□□□□□ -1.5
RRN3	YKL125W	ATG13	Q06628	738 aa		5.71	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms