RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C GPB1Q08886 897 aa3.03□□□□□ -1.92
VPS55YJR044C RIB2Q12362 591 aaKnown RBP3.03□□□□□ -1.92
VPS55YJR044C PTC5Q12511 572 aa3.03□□□□□ -1.92
VPS55YJR044C CDC6P09119 513 aa3.02□□□□□ -1.93
VPS55YJR044C ALG3P38179 458 aa3.02□□□□□ -1.93
VPS55YJR044C PIK1P39104 1066 aa3.02□□□□□ -1.93
VPS55YJR044C MNN10P50108 393 aaKnown RBP3.02□□□□□ -1.93
VPS55YJR044C YAP6Q03935 383 aa3.02□□□□□ -1.93
VPS55YJR044C RXT3Q07458 294 aa3.02□□□□□ -1.93
VPS55YJR044C VTS1Q08831 523 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
VPS55YJR044C RAD53P22216 821 aa3.01□□□□□ -1.93
VPS55YJR044C CHS7P38843 316 aa3.01□□□□□ -1.93
VPS55YJR044C GCV2P49095 1034 aa3.01□□□□□ -1.93
VPS55YJR044C MAP1Q01662 387 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
VPS55YJR044C KIN4Q01919 800 aa3.01□□□□□ -1.93
VPS55YJR044C RSM24Q03976 319 aa3.01□□□□□ -1.93
VPS55YJR044C KAR2P16474 682 aaKnown RBP3□□□□□ -1.93
VPS55YJR044C PMI40P29952 429 aaKnown RBP3□□□□□ -1.93
VPS55YJR044C RFC5P38251 354 aa3□□□□□ -1.93
VPS55YJR044C CTF4Q01454 927 aa3□□□□□ -1.93
VPS55YJR044C HAT1Q12341 374 aa3□□□□□ -1.93
VPS55YJR044C PHO4P07270 312 aaKnown RBP2.99□□□□□ -1.93
VPS55YJR044C STE11P23561 717 aa2.99□□□□□ -1.93
VPS55YJR044C EMC1P25574 760 aa2.99□□□□□ -1.93
VPS55YJR044C FAA3P39002 694 aa2.99□□□□□ -1.93
VPS55YJR044C DAK2P43550 591 aa2.99□□□□□ -1.93
VPS55YJR044C SEC23P15303 768 aaKnown RBP2.98□□□□□ -1.93
VPS55YJR044C APL1P27351 700 aa2.98□□□□□ -1.93
VPS55YJR044C CDC3P32457 520 aaKnown RBP2.98□□□□□ -1.93
VPS55YJR044C VPS62P53285 467 aa2.98□□□□□ -1.93
VPS55YJR044C RAT1Q02792 1006 aaKnown RBP2.98□□□□□ -1.93
VPS55YJR044C YPL109CQ02981 657 aa2.98□□□□□ -1.93
VPS55YJR044C ADI1Q03677 179 aa2.98□□□□□ -1.93
VPS55YJR044C YLR224WQ05947 369 aa2.98□□□□□ -1.93
VPS55YJR044C PMA1P05030 918 aaKnown RBP2.97□□□□□ -1.93
VPS55YJR044C VPS35P34110 944 aa2.97□□□□□ -1.93
VPS55YJR044C YHL050CP38721 697 aa2.97□□□□□ -1.93
VPS55YJR044C YHR219WP38900 624 aa2.97□□□□□ -1.93
VPS55YJR044C MSS4P38994 779 aa2.97□□□□□ -1.93
VPS55YJR044C PIC2P40035 300 aa2.97□□□□□ -1.93
VPS55YJR044C SVS1Q12254 260 aa2.97□□□□□ -1.93
VPS55YJR044C GCD6P32501 712 aaKnown RBP2.96□□□□□ -1.94
VPS55YJR044C RPN3P40016 523 aaKnown RBP2.96□□□□□ -1.94
VPS55YJR044C PBP1P53297 722 aaKnown RBP2.96□□□□□ -1.94
VPS55YJR044C ROD1Q02805 837 aa2.96□□□□□ -1.94
VPS55YJR044C HMI1Q12039 706 aa2.96□□□□□ -1.94
VPS55YJR044C YER152CP10356 443 aa2.95□□□□□ -1.94
VPS55YJR044C KIN2P13186 1147 aaKnown RBP2.95□□□□□ -1.94
VPS55YJR044C MET4P32389 672 aa2.95□□□□□ -1.94
VPS55YJR044C DEF1P35732 738 aaKnown RBP2.95□□□□□ -1.94
VPS55YJR044C SIP5P40210 489 aaKnown RBP2.95□□□□□ -1.94
VPS55YJR044C YPL260WQ08977 551 aa2.95□□□□□ -1.94
VPS55YJR044C RLF2Q12495 606 aa2.95□□□□□ -1.94
VPS55YJR044C SSA1P10591 642 aaKnown RBP2.94□□□□□ -1.94
VPS55YJR044C DCG1P32460 244 aa2.94□□□□□ -1.94
VPS55YJR044C PLB1P39105 664 aa2.94□□□□□ -1.94
VPS55YJR044C PPM2Q08282 695 aa2.94□□□□□ -1.94
VPS55YJR044C OXR1Q08952 273 aa2.93□□□□□ -1.94
VPS55YJR044C HXK1P04806 485 aaKnown RBP2.92□□□□□ -1.94
VPS55YJR044C MLS1P30952 554 aa2.92□□□□□ -1.94
VPS55YJR044C MKK2P32491 506 aa2.92□□□□□ -1.94
VPS55YJR044C SIZ1Q04195 904 aa2.92□□□□□ -1.94
VPS55YJR044C NOP12Q08208 459 aaKnown RBP2.92□□□□□ -1.94
VPS55YJR044C PEP7P32609 515 aa2.91□□□□□ -1.94
VPS55YJR044C MOH1P38191 138 aa2.91□□□□□ -1.94
VPS55YJR044C MSC2Q03455 724 aa2.91□□□□□ -1.94
VPS55YJR044C WHI5Q12416 295 aa2.91□□□□□ -1.94
VPS55YJR044C BAS1P22035 811 aa2.9□□□□□ -1.95
VPS55YJR044C HRR25P29295 494 aaKnown RBP2.9□□□□□ -1.95
VPS55YJR044C RPT1P33299 467 aaKnown RBP2.9□□□□□ -1.95
VPS55YJR044C TPO1Q07824 586 aa2.9□□□□□ -1.95
VPS55YJR044C OAR1P35731 278 aa2.89□□□□□ -1.95
VPS55YJR044C RGD1P38339 666 aa2.89□□□□□ -1.95
VPS55YJR044C MXR1P40029 184 aa2.89□□□□□ -1.95
VPS55YJR044C MND2P40577 368 aa2.89□□□□□ -1.95
VPS55YJR044C THI12P42883 340 aa2.89□□□□□ -1.95
VPS55YJR044C THI5P43534 340 aa2.89□□□□□ -1.95
VPS55YJR044C THI11P47183 340 aa2.89□□□□□ -1.95
VPS55YJR044C URN1Q06525 465 aaKnown RBP2.89□□□□□ -1.95
VPS55YJR044C THI13Q07748 340 aa2.89□□□□□ -1.95
VPS55YJR044C BI4P03879 638 aa2.88□□□□□ -1.95
VPS55YJR044C PFK1P16861 987 aaKnown RBP2.88□□□□□ -1.95
VPS55YJR044C ACE2P21192 770 aa2.88□□□□□ -1.95
VPS55YJR044C SYP1P25623 870 aaKnown RBP2.88□□□□□ -1.95
VPS55YJR044C UGA2P38067 497 aa2.88□□□□□ -1.95
VPS55YJR044C HXT13P39924 564 aa2.88□□□□□ -1.95
VPS55YJR044C HFM1P51979 1187 aa2.88□□□□□ -1.95
VPS55YJR044C UBA2P52488 636 aa2.88□□□□□ -1.95
VPS55YJR044C HXT17P53631 564 aa2.88□□□□□ -1.95
VPS55YJR044C SIW14P53965 281 aa2.88□□□□□ -1.95
VPS55YJR044C HXT15P54854 567 aa2.88□□□□□ -1.95
VPS55YJR044C ATG13Q06628 738 aa2.88□□□□□ -1.95
VPS55YJR044C XYL2Q07993 356 aa2.88□□□□□ -1.95
VPS55YJR044C ENA1P13587 1091 aa2.87□□□□□ -1.95
VPS55YJR044C GEF1P37020 779 aa2.87□□□□□ -1.95
VPS55YJR044C POA1P38218 177 aa2.87□□□□□ -1.95
VPS55YJR044C PPX1P38698 397 aa2.87□□□□□ -1.95
VPS55YJR044C EXG2P52911 562 aa2.87□□□□□ -1.95
VPS55YJR044C ENA2Q01896 1091 aa2.87□□□□□ -1.95
VPS55YJR044C LGE1Q02796 332 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms