RNA–Protein interactions for RNA: YJL194W

CDC6, Transcript of Essential ATP-binding protein required for DNA replication, yeast

Gene CDC6, Length 1,542 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC6	YJL194W	CHS3	P29465	1165 aa		4.99	□□□□□ -1.61
CDC6	YJL194W	STE5	P32917	917 aa		4.99	□□□□□ -1.61
CDC6	YJL194W	DUT1	P33317	147 aa		4.99	□□□□□ -1.61
CDC6	YJL194W	TFC4	P33339	1025 aa		4.99	□□□□□ -1.61
CDC6	YJL194W	QDR2	P40474	542 aa		4.99	□□□□□ -1.61
CDC6	YJL194W	RSC1	P53236	928 aa		4.99	□□□□□ -1.61
CDC6	YJL194W	RSC4	Q02206	625 aa		4.99	□□□□□ -1.61
CDC6	YJL194W	SRP1	Q02821	542 aa	Known RBP	4.99	□□□□□ -1.61
CDC6	YJL194W	YML131W	Q03102	365 aa		4.99	□□□□□ -1.61
CDC6	YJL194W	RCF1	Q03713	159 aa		4.99	□□□□□ -1.61
CDC6	YJL194W	PHM6	Q05637	104 aa		4.99	□□□□□ -1.61
CDC6	YJL194W	FMP25	Q08023	583 aa		4.99	□□□□□ -1.61
CDC6	YJL194W	INP54	Q08227	384 aa	Known RBP	4.99	□□□□□ -1.61
CDC6	YJL194W	RRP6	Q12149	733 aa	Known RBP	4.99	□□□□□ -1.61
CDC6	YJL194W	SPT7	P35177	1332 aa		4.99	□□□□□ -1.61
CDC6	YJL194W	GAL1	P04385	528 aa		4.98	□□□□□ -1.61
CDC6	YJL194W	SBP1	P10080	294 aa	Known RBP	4.98	□□□□□ -1.61
CDC6	YJL194W	RGP1	P16664	663 aa		4.98	□□□□□ -1.61
CDC6	YJL194W	RPC31	P17890	251 aa		4.98	□□□□□ -1.61
CDC6	YJL194W	PPH3	P32345	308 aa		4.98	□□□□□ -1.61
CDC6	YJL194W	PRP40	P33203	583 aa	Known RBP	4.98	□□□□□ -1.61
CDC6	YJL194W	NIC96	P34077	839 aa		4.98	□□□□□ -1.61
CDC6	YJL194W	PXA2	P34230	853 aa		4.98	□□□□□ -1.61
CDC6	YJL194W	YKL050C	P35736	922 aa		4.98	□□□□□ -1.61
CDC6	YJL194W	YKL133C	P36066	463 aa		4.98	□□□□□ -1.61
CDC6	YJL194W	BAP2	P38084	609 aa		4.98	□□□□□ -1.61
CDC6	YJL194W	SAP185	P40856	1058 aa		4.98	□□□□□ -1.61
CDC6	YJL194W	ROG3	P43602	733 aa		4.98	□□□□□ -1.61
CDC6	YJL194W	SKP1	P52286	194 aa		4.98	□□□□□ -1.61
CDC6	YJL194W	HOS2	P53096	452 aa	Predicted RBP	4.98	□□□□□ -1.61
CDC6	YJL194W	NAM8	Q00539	523 aa	Known RBP	4.98	□□□□□ -1.61
CDC6	YJL194W	TY1A-MR1	Q04215	440 aa		4.98	□□□□□ -1.61
CDC6	YJL194W	YMR018W	Q04364	514 aa		4.98	□□□□□ -1.61
CDC6	YJL194W	GIC2	Q06648	383 aa		4.98	□□□□□ -1.61
CDC6	YJL194W	NEW1	Q08972	1196 aa	Known RBP	4.98	□□□□□ -1.61
CDC6	YJL194W	YOL087C	Q99247	1116 aa		4.98	□□□□□ -1.61
CDC6	YJL194W	SPA2	P23201	1466 aa	Known RBP	4.98	□□□□□ -1.61
CDC6	YJL194W	HOM3	P10869	527 aa		4.97	□□□□□ -1.61
CDC6	YJL194W	PLC1	P32383	869 aa		4.97	□□□□□ -1.61
CDC6	YJL194W	VPH1	P32563	840 aa	Known RBP	4.97	□□□□□ -1.61
CDC6	YJL194W	ANP1	P32629	500 aa		4.97	□□□□□ -1.61
CDC6	YJL194W	APE4	P38821	490 aa		4.97	□□□□□ -1.61
CDC6	YJL194W	DSS1	P39112	969 aa		4.97	□□□□□ -1.61
CDC6	YJL194W	HXT8	P40886	569 aa		4.97	□□□□□ -1.61
CDC6	YJL194W	IML2	P47031	731 aa		4.97	□□□□□ -1.61
CDC6	YJL194W	TAF8	Q03750	510 aa		4.97	□□□□□ -1.61
CDC6	YJL194W	YCS4	Q06156	1176 aa		4.97	□□□□□ -1.61
CDC6	YJL194W	REH1	Q06709	432 aa		4.97	□□□□□ -1.61
CDC6	YJL194W	MRL1	Q06815	381 aa		4.97	□□□□□ -1.61
CDC6	YJL194W	SSN2	P38931	1420 aa		4.97	□□□□□ -1.61
CDC6	YJL194W	TY1B-A	O13527	1196 aa	Known RBP	4.97	□□□□□ -1.61
CDC6	YJL194W	KTR2	P33550	425 aa		4.97	□□□□□ -1.61
CDC6	YJL194W	TYS1	P36421	394 aa	Known RBP	4.97	□□□□□ -1.61
CDC6	YJL194W	RTA1	P53047	317 aa		4.97	□□□□□ -1.61
CDC6	YJL194W	GPG1	P53130	126 aa		4.97	□□□□□ -1.61
CDC6	YJL194W	PRP43	P53131	767 aa	Known RBP	4.97	□□□□□ -1.61
CDC6	YJL194W	YNR063W	P53749	607 aa		4.97	□□□□□ -1.61
CDC6	YJL194W	SHE9	Q04172	456 aa		4.97	□□□□□ -1.61
CDC6	YJL194W	MLC2	Q06580	163 aa		4.97	□□□□□ -1.61
CDC6	YJL194W	YOR296W	Q08748	1289 aa		4.97	□□□□□ -1.61
CDC6	YJL194W	GCR1	P07261	785 aa		4.96	□□□□□ -1.62
CDC6	YJL194W	PRP9	P19736	530 aa	Known RBP	4.96	□□□□□ -1.62
CDC6	YJL194W	GSY1	P23337	708 aa		4.96	□□□□□ -1.62
CDC6	YJL194W	AGP1	P25376	633 aa		4.96	□□□□□ -1.62
CDC6	YJL194W	HSP78	P33416	811 aa		4.96	□□□□□ -1.62
CDC6	YJL194W	MOT2	P34909	587 aa	Known RBP	4.96	□□□□□ -1.62
CDC6	YJL194W	ABZ1	P37254	787 aa	Predicted RBP	4.96	□□□□□ -1.62
CDC6	YJL194W	PBY1	P38254	753 aa		4.96	□□□□□ -1.62
CDC6	YJL194W	YBR287W	P38355	427 aa		4.96	□□□□□ -1.62
CDC6	YJL194W	CNN1	P43618	361 aa		4.96	□□□□□ -1.62
CDC6	YJL194W	GPI8	P49018	411 aa		4.96	□□□□□ -1.62
CDC6	YJL194W	DIT1	P21623	536 aa		4.95	□□□□□ -1.62
CDC6	YJL194W	GAR1	P28007	205 aa	Known RBP	4.95	□□□□□ -1.62
CDC6	YJL194W	DBF20	P32328	564 aa		4.95	□□□□□ -1.62
CDC6	YJL194W	MCM10	P32354	571 aa		4.95	□□□□□ -1.62
CDC6	YJL194W	MRPL16	P38064	232 aa		4.95	□□□□□ -1.62
CDC6	YJL194W	GIP1	P38229	639 aa		4.95	□□□□□ -1.62
CDC6	YJL194W	GDH3	P39708	457 aa		4.95	□□□□□ -1.62
CDC6	YJL194W	YIR007W	P40566	764 aa		4.95	□□□□□ -1.62
CDC6	YJL194W	ALR2	P43553	858 aa		4.95	□□□□□ -1.62
CDC6	YJL194W	ATP22	P50273	684 aa	Predicted RBP	4.95	□□□□□ -1.62
CDC6	YJL194W	CTF4	Q01454	927 aa		4.95	□□□□□ -1.62
CDC6	YJL194W	CUS1	Q02554	436 aa	Predicted RBP	4.95	□□□□□ -1.62
CDC6	YJL194W	YPL109C	Q02981	657 aa		4.95	□□□□□ -1.62
CDC6	YJL194W	PRP3	Q03338	469 aa	Predicted RBP	4.95	□□□□□ -1.62
CDC6	YJL194W	SSP2	Q08646	371 aa		4.95	□□□□□ -1.62
CDC6	YJL194W	YDR461C-A	Q2V2P7	80 aa		4.95	□□□□□ -1.62
CDC6	YJL194W	HSP82	P02829	709 aa	Known RBP	4.94	□□□□□ -1.62
CDC6	YJL194W	MSN1	P22148	382 aa		4.94	□□□□□ -1.62
CDC6	YJL194W	URA1	P28272	314 aa	Predicted RBP	4.94	□□□□□ -1.62
CDC6	YJL194W	SBA1	P28707	216 aa	Known RBP	4.94	□□□□□ -1.62
CDC6	YJL194W	MCM5	P29496	775 aa	Known RBP	4.94	□□□□□ -1.62
CDC6	YJL194W	VBA5	P36172	582 aa		4.94	□□□□□ -1.62
CDC6	YJL194W	RAD55	P38953	406 aa		4.94	□□□□□ -1.62
CDC6	YJL194W	FIR1	P40020	876 aa		4.94	□□□□□ -1.62
CDC6	YJL194W	NTA1	P40354	457 aa		4.94	□□□□□ -1.62
CDC6	YJL194W	ESL1	P40456	1118 aa		4.94	□□□□□ -1.62
CDC6	YJL194W	PFD1	P46988	109 aa		4.94	□□□□□ -1.62
CDC6	YJL194W	UTP8	P53276	713 aa	Known RBP	4.94	□□□□□ -1.62
CDC6	YJL194W	CAF120	P53836	1060 aa		4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 128 ms