RNA–Protein interactions for RNA: YJL143W

TIM17, Transcript of Essential component of the TIM23 complex, yeast

Gene TIM17, Length 477 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIM17	YJL143W	URA1	P28272	314 aa	Predicted RBP	11.74	□□□□□ -0.53
TIM17	YJL143W	MSP1	P28737	362 aa		11.74	□□□□□ -0.53
TIM17	YJL143W	MCM4	P30665	933 aa	Known RBP	11.74	□□□□□ -0.53
TIM17	YJL143W	GAA1	P39012	614 aa		11.74	□□□□□ -0.53
TIM17	YJL143W	CCT5	P40413	562 aa	Known RBP	11.74	□□□□□ -0.53
TIM17	YJL143W	YGR273C	P53329	174 aa		11.74	□□□□□ -0.53
TIM17	YJL143W	CNM67	P53865	581 aa	Known RBP	11.74	□□□□□ -0.53
TIM17	YJL143W	SLD5	Q03406	294 aa		11.74	□□□□□ -0.53
TIM17	YJL143W	ERP3	Q12403	225 aa		11.74	□□□□□ -0.53
TIM17	YJL143W	PTC5	Q12511	572 aa		11.74	□□□□□ -0.53
TIM17	YJL143W	ILV1	P00927	576 aa	Known RBP	11.73	□□□□□ -0.53
TIM17	YJL143W	CLB5	P30283	435 aa		11.73	□□□□□ -0.53
TIM17	YJL143W	ATG32	P40458	529 aa		11.73	□□□□□ -0.53
TIM17	YJL143W	RSM25	P40496	264 aa		11.73	□□□□□ -0.53
TIM17	YJL143W	CIR1	P42940	261 aa		11.73	□□□□□ -0.53
TIM17	YJL143W	VPS53	P47061	822 aa		11.73	□□□□□ -0.53
TIM17	YJL143W	YGR153W	P48238	217 aa		11.73	□□□□□ -0.53
TIM17	YJL143W	CUE3	P53137	624 aa	Known RBP	11.73	□□□□□ -0.53
TIM17	YJL143W	SDA1	P53313	767 aa	Known RBP	11.73	□□□□□ -0.53
TIM17	YJL143W	ORC4	P54791	529 aa		11.73	□□□□□ -0.53
TIM17	YJL143W	MMR1	Q06324	491 aa		11.73	□□□□□ -0.53
TIM17	YJL143W	ICL2	Q12031	575 aa		11.73	□□□□□ -0.53
TIM17	YJL143W	RPL22A	P05749	121 aa	Known RBP	11.72	□□□□□ -0.53
TIM17	YJL143W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	11.72	□□□□□ -0.53	not detected
TIM17	YJL143W	TFC4	P33339	1025 aa		11.72	□□□□□ -0.53
TIM17	YJL143W	PGM1	P33401	570 aa	Known RBP	11.72	□□□□□ -0.53
TIM17	YJL143W	REG2	P38232	338 aa		11.72	□□□□□ -0.53
TIM17	YJL143W	DAK2	P43550	591 aa		11.72	□□□□□ -0.53
TIM17	YJL143W	PHM6	Q05637	104 aa		11.72	□□□□□ -0.53
TIM17	YJL143W	YLR326W	Q06170	240 aa	Known RBP	11.72	□□□□□ -0.53
TIM17	YJL143W	YLH47	Q06493	454 aa		11.72	□□□□□ -0.53
TIM17	YJL143W	DDP1	Q99321	188 aa	Known RBP	11.72	□□□□□ -0.53
TIM17	YJL143W	PGK1	P00560	416 aa	Known RBP	11.71	□□□□□ -0.53
TIM17	YJL143W	TUF1	P02992	437 aa	Known RBP	11.71	□□□□□ -0.53
TIM17	YJL143W	BMH1	P29311	267 aa	Known RBP	11.71	□□□□□ -0.53
TIM17	YJL143W	TIM23	P32897	222 aa		11.71	□□□□□ -0.53
TIM17	YJL143W	ORC6	P38826	435 aa		11.71	□□□□□ -0.53
TIM17	YJL143W	ROG3	P43602	733 aa		11.71	□□□□□ -0.53
TIM17	YJL143W	WHI4	Q07655	649 aa	Known RBP	11.71	□□□□□ -0.53
TIM17	YJL143W	MSC6	Q08818	692 aa	Known RBP	11.71	□□□□□ -0.53
TIM17	YJL143W	SMC6	Q12749	1114 aa		11.71	□□□□□ -0.53
TIM17	YJL143W	HIS4	P00815	799 aa	Known RBP	11.7	□□□□□ -0.54
TIM17	YJL143W	FRS2	P15625	503 aa	Known RBP	11.7	□□□□□ -0.54
TIM17	YJL143W	CKA2	P19454	339 aa		11.7	□□□□□ -0.54
TIM17	YJL143W	YKT6	P36015	200 aa	Known RBP	11.7	□□□□□ -0.54
TIM17	YJL143W	HMF1	P40037	129 aa	Known RBP	11.7	□□□□□ -0.54
TIM17	YJL143W	PSF2	P40359	213 aa		11.7	□□□□□ -0.54
TIM17	YJL143W	UBP15	P50101	1230 aa		11.68	□□□□□ -0.54
TIM17	YJL143W	ZPR1	P53303	486 aa	Known RBP	11.68	□□□□□ -0.54
TIM17	YJL143W	CBK1	P53894	756 aa		11.68	□□□□□ -0.54
TIM17	YJL143W	APC11	Q12157	165 aa		11.68	□□□□□ -0.54
TIM17	YJL143W	TRM11	Q12463	433 aa		11.68	□□□□□ -0.54
TIM17	YJL143W	FOB1	O13329	566 aa		11.67	□□□□□ -0.54
TIM17	YJL143W	ROX1	P25042	368 aa		11.67	□□□□□ -0.54
TIM17	YJL143W	SUV3	P32580	737 aa		11.67	□□□□□ -0.54
TIM17	YJL143W	DBP7	P36120	742 aa	Known RBP	11.67	□□□□□ -0.54
TIM17	YJL143W	THI6	P41835	540 aa		11.67	□□□□□ -0.54
TIM17	YJL143W	GPD2	P41911	440 aa	Known RBP	11.67	□□□□□ -0.54
TIM17	YJL143W	YPT11	P48559	417 aa		11.67	□□□□□ -0.54
TIM17	YJL143W	UBA2	P52488	636 aa		11.67	□□□□□ -0.54
TIM17	YJL143W	ESS1	P22696	170 aa		11.66	□□□□□ -0.54
TIM17	YJL143W	UBP11	P36026	717 aa		11.66	□□□□□ -0.54
TIM17	YJL143W	RVS167	P39743	482 aa	Known RBP	11.66	□□□□□ -0.54
TIM17	YJL143W	SNF7	P39929	240 aa	Known RBP	11.66	□□□□□ -0.54
TIM17	YJL143W	YMR321C	Q04898	105 aa		11.66	□□□□□ -0.54
TIM17	YJL143W	SVF1	Q05515	481 aa		11.66	□□□□□ -0.54
TIM17	YJL143W	FUS2	Q05670	677 aa		11.66	□□□□□ -0.54
TIM17	YJL143W	CRD1	Q07560	283 aa		11.66	□□□□□ -0.54
TIM17	YJL143W	CLN3	P13365	580 aa		11.65	□□□□□ -0.54
TIM17	YJL143W	YUR1	P26725	428 aa		11.65	□□□□□ -0.54
TIM17	YJL143W	TVP38	P36164	337 aa		11.65	□□□□□ -0.54
TIM17	YJL143W	ARL1	P38116	183 aa	Known RBP	11.65	□□□□□ -0.54
TIM17	YJL143W	VTC2	P43585	828 aa		11.65	□□□□□ -0.54
TIM17	YJL143W	CTR1	P49573	406 aa		11.65	□□□□□ -0.54
TIM17	YJL143W	SRD1	P09007	221 aa		11.64	□□□□□ -0.55
TIM17	YJL143W	POX1	P13711	748 aa		11.64	□□□□□ -0.55
TIM17	YJL143W	RPN12	P32496	274 aa		11.64	□□□□□ -0.55
TIM17	YJL143W	YER130C	P39959	443 aa		11.64	□□□□□ -0.55
TIM17	YJL143W	YGL039W	P53183	348 aa	Known RBP	11.64	□□□□□ -0.55
TIM17	YJL143W	MDR1	P53258	950 aa		11.64	□□□□□ -0.55
TIM17	YJL143W	PGA2	P53903	129 aa		11.64	□□□□□ -0.55
TIM17	YJL143W	HIR1	P32479	840 aa		11.63	□□□□□ -0.55
TIM17	YJL143W	DID4	P36108	232 aa		11.63	□□□□□ -0.55
TIM17	YJL143W	PET10	P36139	283 aa		11.63	□□□□□ -0.55
TIM17	YJL143W	GPT2	P36148	743 aa		11.63	□□□□□ -0.55
TIM17	YJL143W	NUP82	P40368	713 aa		11.63	□□□□□ -0.55
TIM17	YJL143W	FYV10	P40492	516 aa		11.63	□□□□□ -0.55
TIM17	YJL143W	ADY4	Q05955	493 aa		11.63	□□□□□ -0.55
TIM17	YJL143W	GPA1	P08539	472 aa		11.62	□□□□□ -0.55
TIM17	YJL143W	PRP22	P24384	1145 aa	Known RBP	11.62	□□□□□ -0.55
TIM17	YJL143W	CDC15	P27636	974 aa		11.62	□□□□□ -0.55
TIM17	YJL143W	PAH1	P32567	862 aa		11.62	□□□□□ -0.55
TIM17	YJL143W	SIP3	P38717	1229 aa		11.62	□□□□□ -0.55
TIM17	YJL143W	FIS1	P40515	155 aa		11.62	□□□□□ -0.55
TIM17	YJL143W	BRE2	P43132	505 aa		11.62	□□□□□ -0.55
TIM17	YJL143W	YJR107W	P47145	328 aa		11.62	□□□□□ -0.55
TIM17	YJL143W	KRE33	P53914	1056 aa	Known RBP	11.62	□□□□□ -0.55
TIM17	YJL143W	PSR2	Q07949	397 aa		11.62	□□□□□ -0.55
TIM17	YJL143W	YLL058W	Q12198	575 aa		11.62	□□□□□ -0.55
TIM17	YJL143W	PDC1	P06169	563 aa	Known RBP	11.61	□□□□□ -0.55

Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms