RNA–Protein interactions for RNA: YHR105W

YPT35, Transcript of Endosomal protein of unknown function, yeast

Gene YPT35, Length 645 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT35	YHR105W	YPL066W	Q12194	479 aa		5.13	□□□□□ -1.59
YPT35	YHR105W	RAD27	P26793	382 aa		5.12	□□□□□ -1.59
YPT35	YHR105W	RPL8B	P29453	256 aa	Known RBP	5.12	□□□□□ -1.59
YPT35	YHR105W	MKK2	P32491	506 aa		5.12	□□□□□ -1.59
YPT35	YHR105W	AFG2	P32794	780 aa		5.12	□□□□□ -1.59
YPT35	YHR105W	ADD66	P36040	267 aa		5.12	□□□□□ -1.59
YPT35	YHR105W	VBA5	P36172	582 aa		5.12	□□□□□ -1.59
YPT35	YHR105W	INP52	P50942	1183 aa		5.12	□□□□□ -1.59
YPT35	YHR105W	RAT1	Q02792	1006 aa	Known RBP	5.12	□□□□□ -1.59
YPT35	YHR105W	GIC2	Q06648	383 aa		5.12	□□□□□ -1.59
YPT35	YHR105W	AVO1	Q08236	1176 aa		5.12	□□□□□ -1.59
YPT35	YHR105W	SBA1	P28707	216 aa	Known RBP	5.11	□□□□□ -1.59
YPT35	YHR105W	YKR073C	P36153	106 aa		5.11	□□□□□ -1.59
YPT35	YHR105W	YAR028W	P39548	234 aa		5.11	□□□□□ -1.59
YPT35	YHR105W	ENT3	P47160	408 aa		5.11	□□□□□ -1.59
YPT35	YHR105W	INO1	P11986	533 aa		5.1	□□□□□ -1.59
YPT35	YHR105W	FPR3	P38911	411 aa	Known RBP	5.1	□□□□□ -1.59
YPT35	YHR105W	MSH4	P40965	878 aa	Predicted RBP	5.1	□□□□□ -1.59
YPT35	YHR105W	TIF35	Q04067	274 aa	Known RBP	5.1	□□□□□ -1.59
YPT35	YHR105W	SHE9	Q04172	456 aa		5.1	□□□□□ -1.59
YPT35	YHR105W	CYC7	P00045	113 aa		5.09	□□□□□ -1.59
YPT35	YHR105W	CIT1	P00890	479 aa		5.09	□□□□□ -1.59
YPT35	YHR105W	PHO8	P11491	566 aa		5.09	□□□□□ -1.59
YPT35	YHR105W	MSB1	P21339	1137 aa	Known RBP	5.09	□□□□□ -1.59
YPT35	YHR105W	TOS1	P38288	455 aa		5.09	□□□□□ -1.59
YPT35	YHR105W	NMD3	P38861	518 aa	Known RBP	5.09	□□□□□ -1.59
YPT35	YHR105W	YJR142W	P47173	342 aa		5.09	□□□□□ -1.59
YPT35	YHR105W	RTA1	P53047	317 aa		5.09	□□□□□ -1.59
YPT35	YHR105W	YGR125W	P53273	1036 aa		5.09	□□□□□ -1.59
YPT35	YHR105W	EAR1	Q03212	550 aa		5.09	□□□□□ -1.59
YPT35	YHR105W	SPO20	Q04359	397 aa		5.09	□□□□□ -1.59
YPT35	YHR105W	AOS1	Q06624	347 aa		5.09	□□□□□ -1.59
YPT35	YHR105W	CAN1	P04817	590 aa		5.08	□□□□□ -1.6
YPT35	YHR105W	MET6	P05694	767 aa	Known RBP	5.08	□□□□□ -1.6
YPT35	YHR105W	LIP5	P32875	414 aa		5.08	□□□□□ -1.6
YPT35	YHR105W	MRP8	P35719	219 aa		5.08	□□□□□ -1.6
YPT35	YHR105W	MNN1	P39106	762 aa		5.08	□□□□□ -1.6
YPT35	YHR105W	RKM2	Q03942	479 aa		5.08	□□□□□ -1.6
YPT35	YHR105W	DBP5	P20449	482 aa	Known RBP	5.07	□□□□□ -1.6
YPT35	YHR105W	RET1	P22276	1149 aa	Known RBP	5.07	□□□□□ -1.6
YPT35	YHR105W	SYP1	P25623	870 aa	Known RBP	5.07	□□□□□ -1.6
YPT35	YHR105W	ALG3	P38179	458 aa		5.07	□□□□□ -1.6
YPT35	YHR105W	MBP1	P39678	833 aa		5.07	□□□□□ -1.6
YPT35	YHR105W	IRR1	P40541	1150 aa		5.07	□□□□□ -1.6
YPT35	YHR105W	MMM1	P41800	426 aa		5.07	□□□□□ -1.6
YPT35	YHR105W	TAF8	Q03750	510 aa		5.07	□□□□□ -1.6
YPT35	YHR105W	RSA3	Q05942	220 aa	Known RBP	5.07	□□□□□ -1.6
YPT35	YHR105W	UBX5	Q06682	500 aa		5.07	□□□□□ -1.6
YPT35	YHR105W	RPS4A	P0CX35	261 aa	Known RBP	5.06	□□□□□ -1.6
YPT35	YHR105W	RPS4B	P0CX36	261 aa	Known RBP	5.06	□□□□□ -1.6
YPT35	YHR105W	GAL11	P19659	1081 aa		5.06	□□□□□ -1.6
YPT35	YHR105W	HSP60	P19882	572 aa	Known RBP	5.06	□□□□□ -1.6
YPT35	YHR105W	NFS1	P25374	497 aa		5.06	□□□□□ -1.6
YPT35	YHR105W	SMY2	P32909	740 aa	Known RBP	5.06	□□□□□ -1.6
YPT35	YHR105W	BET3	P36149	193 aa		5.06	□□□□□ -1.6
YPT35	YHR105W	CHZ1	P40019	153 aa	Predicted RBP	5.06	□□□□□ -1.6
YPT35	YHR105W	MPH1	P40562	993 aa		5.06	□□□□□ -1.6
YPT35	YHR105W	ALT1	P52893	592 aa		5.06	□□□□□ -1.6
YPT35	YHR105W	POB3	Q04636	552 aa	Known RBP	5.06	□□□□□ -1.6
YPT35	YHR105W	YLR257W	Q06146	321 aa	Known RBP	5.06	□□□□□ -1.6
YPT35	YHR105W	YLR125W	Q12138	136 aa		5.06	□□□□□ -1.6
YPT35	YHR105W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	5.05	□□□□□ -1.6	not detected
YPT35	YHR105W	WHI3	P34761	661 aa	Known RBP	5.05	□□□□□ -1.6
YPT35	YHR105W	NNK1	P36003	928 aa		5.05	□□□□□ -1.6
YPT35	YHR105W	PBY1	P38254	753 aa		5.05	□□□□□ -1.6
YPT35	YHR105W	ATG14	P38270	344 aa		5.05	□□□□□ -1.6
YPT35	YHR105W	QNS1	P38795	714 aa	Known RBP	5.05	□□□□□ -1.6
YPT35	YHR105W	SIP5	P40210	489 aa	Known RBP	5.05	□□□□□ -1.6
YPT35	YHR105W	CNN1	P43618	361 aa		5.05	□□□□□ -1.6
YPT35	YHR105W	CIT3	P43635	486 aa		5.05	□□□□□ -1.6
YPT35	YHR105W	YGL176C	P46945	554 aa		5.05	□□□□□ -1.6
YPT35	YHR105W	UTP8	P53276	713 aa	Known RBP	5.05	□□□□□ -1.6
YPT35	YHR105W	BRE4	Q07660	1125 aa		5.05	□□□□□ -1.6
YPT35	YHR105W	SPO75	Q07798	868 aa		5.05	□□□□□ -1.6
YPT35	YHR105W	LAP2	Q10740	671 aa		5.05	□□□□□ -1.6
YPT35	YHR105W	OSH2	Q12451	1283 aa		5.05	□□□□□ -1.6
YPT35	YHR105W	RKM4	Q12504	494 aa		5.05	□□□□□ -1.6
YPT35	YHR105W	PTC5	Q12511	572 aa		5.05	□□□□□ -1.6
YPT35	YHR105W	TSR4	P25040	408 aa		5.04	□□□□□ -1.6
YPT35	YHR105W	THI4	P32318	326 aa		5.04	□□□□□ -1.6
YPT35	YHR105W	MAL11	P53048	616 aa		5.04	□□□□□ -1.6
YPT35	YHR105W	ERP6	P53198	216 aa		5.04	□□□□□ -1.6
YPT35	YHR105W	EAF1	Q06337	982 aa		5.04	□□□□□ -1.6
YPT35	YHR105W	NSI1	Q12457	570 aa		5.04	□□□□□ -1.6
YPT35	YHR105W	ARE1	P25628	610 aa		5.03	□□□□□ -1.6
YPT35	YHR105W	KIP1	P28742	1111 aa		5.03	□□□□□ -1.6
YPT35	YHR105W	MLS1	P30952	554 aa		5.03	□□□□□ -1.6
YPT35	YHR105W	GRX4	P32642	244 aa		5.03	□□□□□ -1.6
YPT35	YHR105W	HBS1	P32769	611 aa	Known RBP	5.03	□□□□□ -1.6
YPT35	YHR105W	YKL107W	P34251	309 aa		5.03	□□□□□ -1.6
YPT35	YHR105W	HSE1	P38753	452 aa		5.03	□□□□□ -1.6
YPT35	YHR105W	ALR2	P43553	858 aa		5.03	□□□□□ -1.6
YPT35	YHR105W	CTH1	P47976	325 aa		5.03	□□□□□ -1.6
YPT35	YHR105W	YOR059C	Q08448	450 aa	Known RBP	5.03	□□□□□ -1.6
YPT35	YHR105W	PUS7	Q08647	676 aa	Known RBP	5.03	□□□□□ -1.6
YPT35	YHR105W	MCM7	P38132	845 aa		5.02	□□□□□ -1.61
YPT35	YHR105W	GPB2	P39717	880 aa		5.02	□□□□□ -1.61
YPT35	YHR105W	YJL045W	P47052	634 aa		5.02	□□□□□ -1.61
YPT35	YHR105W	VPS53	P47061	822 aa		5.02	□□□□□ -1.61
YPT35	YHR105W	RCM1	P53972	490 aa		5.02	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms