RNA–Protein interactions for RNA: YHL025W

SNF6, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF6, Length 999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF6YHL025W CFT2Q12102 859 aaPredicted RBP12.67□□□□□ -0.38
SNF6YHL025W TUF1P02992 437 aaKnown RBP12.66□□□□□ -0.38
SNF6YHL025W ATE1P16639 503 aa12.66□□□□□ -0.38
SNF6YHL025W UGA4P32837 571 aa12.66□□□□□ -0.38
SNF6YHL025W NDT80P38830 627 aa12.66□□□□□ -0.38
SNF6YHL025W ATG1P53104 897 aa12.66□□□□□ -0.38
SNF6YHL025W BUL2Q03758 920 aaKnown RBP12.66□□□□□ -0.38
SNF6YHL025W GSY1P23337 708 aa12.65□□□□□ -0.38
SNF6YHL025W CDC60P26637 1090 aaKnown RBP12.65□□□□□ -0.38
SNF6YHL025W TGL1P34163 548 aa12.65□□□□□ -0.38
SNF6YHL025W MCD4P36051 919 aa12.65□□□□□ -0.38
SNF6YHL025W MRPL10P36520 322 aa12.65□□□□□ -0.38
SNF6YHL025W THI6P41835 540 aa12.65□□□□□ -0.38
SNF6YHL025W LIF1P53150 421 aa12.65□□□□□ -0.38
SNF6YHL025W MFM1Q02783 413 aa12.65□□□□□ -0.38
SNF6YHL025W OYE2Q03558 400 aaKnown RBP12.65□□□□□ -0.38
SNF6YHL025W AIM33Q04516 312 aa12.65□□□□□ -0.38
SNF6YHL025W TMA64Q04600 565 aaKnown RBP12.65□□□□□ -0.38
SNF6YHL025W OXR1Q08952 273 aa12.65□□□□□ -0.38
SNF6YHL025W TY3A-GQ12173 290 aa12.65□□□□□ -0.38
SNF6YHL025W TY3A-IQ99219 290 aa12.65□□□□□ -0.38
SNF6YHL025W FOB1O13329 566 aa12.64□□□□□ -0.39
SNF6YHL025W CKA2P19454 339 aa12.64□□□□□ -0.39
SNF6YHL025W GSY2P27472 705 aa12.64□□□□□ -0.39
SNF6YHL025W HIR1P32479 840 aa12.64□□□□□ -0.39
SNF6YHL025W YKR018CP36114 725 aa12.64□□□□□ -0.39
SNF6YHL025W GAA1P39012 614 aa12.64□□□□□ -0.39
SNF6YHL025W UBA2P52488 636 aa12.64□□□□□ -0.39
SNF6YHL025W YGR273CP53329 174 aa12.64□□□□□ -0.39
SNF6YHL025W SPH1Q06160 661 aa12.64□□□□□ -0.39
SNF6YHL025W GUD1Q07729 489 aa12.64□□□□□ -0.39
SNF6YHL025W SES1P07284 462 aaKnown RBP12.63□□□□□ -0.39
SNF6YHL025W SRP40P32583 406 aaPredicted RBP12.63□□□□□ -0.39
SNF6YHL025W SAC6P32599 642 aaKnown RBP12.63□□□□□ -0.39
SNF6YHL025W ISW1P38144 1129 aa12.63□□□□□ -0.39
SNF6YHL025W ORC6P38826 435 aa12.63□□□□□ -0.39
SNF6YHL025W PHR1P05066 565 aaKnown RBP RIP-Chip data12.62□□□□□ -0.39not detected
SNF6YHL025W SAM1P10659 382 aaKnown RBP12.62□□□□□ -0.39
SNF6YHL025W CDC15P27636 974 aa12.62□□□□□ -0.39
SNF6YHL025W VTC2P43585 828 aa12.62□□□□□ -0.39
SNF6YHL025W ROG3P43602 733 aa12.62□□□□□ -0.39
SNF6YHL025W CBK1P53894 756 aa12.62□□□□□ -0.39
SNF6YHL025W PSR2Q07949 397 aa12.62□□□□□ -0.39
SNF6YHL025W ARP6Q12509 438 aa12.62□□□□□ -0.39
SNF6YHL025W SMC6Q12749 1114 aa12.62□□□□□ -0.39
SNF6YHL025W ILV1P00927 576 aaKnown RBP12.61□□□□□ -0.39
SNF6YHL025W VMA2P16140 517 aaKnown RBP12.61□□□□□ -0.39
SNF6YHL025W MIC60P36112 540 aa12.61□□□□□ -0.39
SNF6YHL025W GPB2P39717 880 aa12.61□□□□□ -0.39
SNF6YHL025W FYV10P40492 516 aa12.61□□□□□ -0.39
SNF6YHL025W VPS62P53285 467 aa12.61□□□□□ -0.39
SNF6YHL025W YAF9P53930 226 aa12.61□□□□□ -0.39
SNF6YHL025W ORC4P54791 529 aa12.61□□□□□ -0.39
SNF6YHL025W SSL2Q00578 843 aa12.61□□□□□ -0.39
SNF6YHL025W TY1B-AO13527 1196 aaKnown RBP12.6□□□□□ -0.39
SNF6YHL025W NOC2P39744 710 aaKnown RBP12.6□□□□□ -0.39
SNF6YHL025W ADY4Q05955 493 aa12.6□□□□□ -0.39
SNF6YHL025W YLH47Q06493 454 aa12.6□□□□□ -0.39
SNF6YHL025W MPE1P35728 441 aaKnown RBP12.59□□□□□ -0.39
SNF6YHL025W PET10P36139 283 aa12.59□□□□□ -0.39
SNF6YHL025W YLR326WQ06170 240 aaKnown RBP12.59□□□□□ -0.39
SNF6YHL025W UTR4P32626 227 aa12.58□□□□□ -0.4
SNF6YHL025W MCR1P36060 302 aaKnown RBP12.58□□□□□ -0.4
SNF6YHL025W LDH1P38139 375 aa12.58□□□□□ -0.4
SNF6YHL025W TFG2P41896 400 aaPredicted RBP12.58□□□□□ -0.4
SNF6YHL025W CLA4P48562 842 aa12.58□□□□□ -0.4
SNF6YHL025W CNM67P53865 581 aaKnown RBP12.58□□□□□ -0.4
SNF6YHL025W FUS2Q05670 677 aa12.58□□□□□ -0.4
SNF6YHL025W DUS3Q06053 668 aaKnown RBP12.58□□□□□ -0.4
SNF6YHL025W WHI4Q07655 649 aaKnown RBP12.58□□□□□ -0.4
SNF6YHL025W CDC19P00549 500 aaKnown RBP12.57□□□□□ -0.4
SNF6YHL025W YEL076C-AP0CX16 216 aa12.57□□□□□ -0.4
SNF6YHL025W YLR464WP0CX17 216 aa12.57□□□□□ -0.4
SNF6YHL025W MIP1P15801 1254 aa12.57□□□□□ -0.4
SNF6YHL025W PKC1P24583 1151 aa12.57□□□□□ -0.4
SNF6YHL025W PGM1P33401 570 aaKnown RBP12.57□□□□□ -0.4
SNF6YHL025W YEL076CP39971 216 aa12.57□□□□□ -0.4
SNF6YHL025W YGR125WP53273 1036 aa12.57□□□□□ -0.4
SNF6YHL025W PTA1Q01329 785 aaPredicted RBP12.57□□□□□ -0.4
SNF6YHL025W GFD1Q04839 188 aaKnown RBP12.57□□□□□ -0.4
SNF6YHL025W HCR1Q05775 265 aaKnown RBP12.57□□□□□ -0.4
SNF6YHL025W ICL2Q12031 575 aa12.57□□□□□ -0.4
SNF6YHL025W RKM4Q12504 494 aa12.57□□□□□ -0.4
SNF6YHL025W YPR117WQ06116 2489 aa12.57□□□□□ -0.4
SNF6YHL025W ISY1P21374 235 aaPredicted RBP12.56□□□□□ -0.4
SNF6YHL025W EUG1P32474 517 aa12.56□□□□□ -0.4
SNF6YHL025W ADE17P38009 592 aaKnown RBP12.56□□□□□ -0.4
SNF6YHL025W BCD1P38772 366 aa12.56□□□□□ -0.4
SNF6YHL025W NUP82P40368 713 aa12.56□□□□□ -0.4
SNF6YHL025W PHM6Q05637 104 aa12.56□□□□□ -0.4
SNF6YHL025W ISA1Q07821 250 aaPredicted RBP12.56□□□□□ -0.4
SNF6YHL025W AFT2Q08957 416 aa12.56□□□□□ -0.4
SNF6YHL025W SHP1P34223 423 aa12.55□□□□□ -0.4
SNF6YHL025W WAR1Q03631 944 aa12.55□□□□□ -0.4
SNF6YHL025W PGK1P00560 416 aaKnown RBP12.54□□□□□ -0.4
SNF6YHL025W CLB5P30283 435 aa12.54□□□□□ -0.4
SNF6YHL025W GPD2P41911 440 aaKnown RBP12.54□□□□□ -0.4
SNF6YHL025W PGA2P53903 129 aa12.54□□□□□ -0.4
SNF6YHL025W YVH1Q02256 364 aaKnown RBP12.54□□□□□ -0.4
SNF6YHL025W FKS1P38631 1876 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 5,963 RNA–protein pairs in 40.9 ms