RNA–Protein interactions for RNA: YGR109W-B

YGR109W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR109W-B, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-BYGR109W-B ORC1P54784 914 aaPredicted RBP2.19□□□□□ -2.06
YGR109W-BYGR109W-B EAR1Q03212 550 aa2.19□□□□□ -2.06
YGR109W-BYGR109W-B SGD1Q06132 899 aa2.19□□□□□ -2.06
YGR109W-BYGR109W-B PTC5Q12511 572 aa2.19□□□□□ -2.06
YGR109W-BYGR109W-B RRT14P40470 206 aa2.19□□□□□ -2.06
YGR109W-BYGR109W-B SFB2P53953 876 aa2.19□□□□□ -2.06
YGR109W-BYGR109W-B RSM24Q03976 319 aa2.19□□□□□ -2.06
YGR109W-BYGR109W-B YJL045WP47052 634 aa2.18□□□□□ -2.06
YGR109W-BYGR109W-B GIP4P39732 760 aa2.18□□□□□ -2.06
YGR109W-BYGR109W-B THO2P53552 1597 aaKnown RBP2.18□□□□□ -2.06
YGR109W-BYGR109W-B DBP5P20449 482 aaKnown RBP2.18□□□□□ -2.06
YGR109W-BYGR109W-B DAK2P43550 591 aa2.18□□□□□ -2.06
YGR109W-BYGR109W-B AIM26P32858 118 aa2.18□□□□□ -2.06
YGR109W-BYGR109W-B IOC3P43596 787 aa2.18□□□□□ -2.06
YGR109W-BYGR109W-B FLR1P38124 548 aa2.17□□□□□ -2.06
YGR109W-BYGR109W-B CNN1P43618 361 aa2.17□□□□□ -2.06
YGR109W-BYGR109W-B SPO21Q12411 609 aa2.17□□□□□ -2.06
YGR109W-BYGR109W-B PRE10P21242 288 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
YGR109W-BYGR109W-B KIP1P28742 1111 aa2.17□□□□□ -2.06
YGR109W-BYGR109W-B THI80P35202 319 aa2.17□□□□□ -2.06
YGR109W-BYGR109W-B MNR2P35724 969 aa2.17□□□□□ -2.06
YGR109W-BYGR109W-B CLU1Q03690 1277 aaKnown RBP2.17□□□□□ -2.06
YGR109W-BYGR109W-B SIZ1Q04195 904 aa2.17□□□□□ -2.06
YGR109W-BYGR109W-B GNT1Q12096 491 aa2.17□□□□□ -2.06
YGR109W-BYGR109W-B RAD2P07276 1031 aa2.17□□□□□ -2.06
YGR109W-BYGR109W-B SEC8P32855 1065 aa2.17□□□□□ -2.06
YGR109W-BYGR109W-B RPT1P33299 467 aaKnown RBP2.17□□□□□ -2.06
YGR109W-BYGR109W-B GEM1P39722 662 aa2.17□□□□□ -2.06
YGR109W-BYGR109W-B YRB30P53107 440 aaPredicted RBP2.17□□□□□ -2.06
YGR109W-BYGR109W-B YDR132CQ03900 495 aa2.17□□□□□ -2.06
YGR109W-BYGR109W-B RPS13P05756 151 aaKnown RBP2.16□□□□□ -2.06
YGR109W-BYGR109W-B YJR107WP47145 328 aa2.16□□□□□ -2.06
YGR109W-BYGR109W-B RXT3Q07458 294 aa2.16□□□□□ -2.06
YGR109W-BYGR109W-B YLL058WQ12198 575 aa2.16□□□□□ -2.06
YGR109W-BYGR109W-B SYP1P25623 870 aaKnown RBP2.16□□□□□ -2.06
YGR109W-BYGR109W-B ALG3P38179 458 aa2.16□□□□□ -2.06
YGR109W-BYGR109W-B AIM3P38266 947 aaKnown RBP2.16□□□□□ -2.06
YGR109W-BYGR109W-B GCN5Q03330 439 aa2.16□□□□□ -2.06
YGR109W-BYGR109W-B RTT10Q08924 1013 aa2.16□□□□□ -2.06
YGR109W-BYGR109W-B PEP1P32319 1579 aa2.16□□□□□ -2.06
YGR109W-BYGR109W-B SNF5P18480 905 aa2.16□□□□□ -2.06
YGR109W-BYGR109W-B RPC82P32349 654 aa2.16□□□□□ -2.06
YGR109W-BYGR109W-B RFC5P38251 354 aa2.16□□□□□ -2.06
YGR109W-BYGR109W-B LAM1P38851 1228 aa2.16□□□□□ -2.06
YGR109W-BYGR109W-B SUB1P54000 292 aaKnown RBP2.16□□□□□ -2.06
YGR109W-BYGR109W-B SEN54Q02825 467 aaPredicted RBP2.16□□□□□ -2.06
YGR109W-BYGR109W-B SVF1Q05515 481 aa2.16□□□□□ -2.06
YGR109W-BYGR109W-B AFG2P32794 780 aa2.16□□□□□ -2.06
YGR109W-BYGR109W-B SEA4P38164 1038 aa2.16□□□□□ -2.06
YGR109W-BYGR109W-B CYC8P14922 966 aa2.15□□□□□ -2.06
YGR109W-BYGR109W-B YPL277CQ08989 487 aa2.15□□□□□ -2.06
YGR109W-BYGR109W-B YDL177CQ12257 170 aa2.15□□□□□ -2.06
YGR109W-BYGR109W-B ACM1Q08981 209 aa2.15□□□□□ -2.07
YGR109W-BYGR109W-B PIC2P40035 300 aa2.15□□□□□ -2.07
YGR109W-BYGR109W-B YNR063WP53749 607 aa2.15□□□□□ -2.07
YGR109W-BYGR109W-B MNN10P50108 393 aaKnown RBP2.14□□□□□ -2.07
YGR109W-BYGR109W-B NOP8Q08287 484 aaPredicted RBP2.14□□□□□ -2.07
YGR109W-BYGR109W-B RKM4Q12504 494 aa2.14□□□□□ -2.07
YGR109W-BYGR109W-B MKK2P32491 506 aa2.14□□□□□ -2.07
YGR109W-BYGR109W-B TRM2P33753 639 aa2.14□□□□□ -2.07
YGR109W-BYGR109W-B TOD6P34219 525 aa2.14□□□□□ -2.07
YGR109W-BYGR109W-B ATG19P35193 415 aa2.14□□□□□ -2.07
YGR109W-BYGR109W-B FAA3P39002 694 aa2.14□□□□□ -2.07
YGR109W-BYGR109W-B MPT5P39016 859 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
YGR109W-BYGR109W-B WHI5Q12416 295 aa2.14□□□□□ -2.07
YGR109W-BYGR109W-B ETP1P38748 585 aaKnown RBP2.14□□□□□ -2.07
YGR109W-BYGR109W-B TAT2P38967 592 aa2.14□□□□□ -2.07
YGR109W-BYGR109W-B POL32P47110 350 aa2.14□□□□□ -2.07
YGR109W-BYGR109W-B SPT20P50875 604 aa2.14□□□□□ -2.07
YGR109W-BYGR109W-B ABZ1P37254 787 aaPredicted RBP2.14□□□□□ -2.07
YGR109W-BYGR109W-B ACK1Q07622 623 aaPredicted RBP2.14□□□□□ -2.07
YGR109W-BYGR109W-B CTS1P29029 562 aa2.13□□□□□ -2.07
YGR109W-BYGR109W-B MEF2P39677 819 aa2.13□□□□□ -2.07
YGR109W-BYGR109W-B MRL1Q06815 381 aa2.13□□□□□ -2.07
YGR109W-BYGR109W-B GNP1P48813 663 aa2.13□□□□□ -2.07
YGR109W-BYGR109W-B ROD1Q02805 837 aa2.13□□□□□ -2.07
YGR109W-BYGR109W-B NOP12Q08208 459 aaKnown RBP2.13□□□□□ -2.07
YGR109W-BYGR109W-B GPB1Q08886 897 aa2.13□□□□□ -2.07
YGR109W-BYGR109W-B PNS1Q12412 539 aa2.13□□□□□ -2.07
YGR109W-BYGR109W-B SSK2P53599 1579 aa2.13□□□□□ -2.07
YGR109W-BYGR109W-B CLN2P20438 545 aa2.13□□□□□ -2.07
YGR109W-BYGR109W-B LYP1P32487 611 aa2.13□□□□□ -2.07
YGR109W-BYGR109W-B MPH1P40562 993 aa2.13□□□□□ -2.07
YGR109W-BYGR109W-B SPO20Q04359 397 aa2.13□□□□□ -2.07
YGR109W-BYGR109W-B SVS1Q12254 260 aa2.13□□□□□ -2.07
YGR109W-BYGR109W-B PMI40P29952 429 aaKnown RBP2.12□□□□□ -2.07
YGR109W-BYGR109W-B IPL1P38991 367 aa2.12□□□□□ -2.07
YGR109W-BYGR109W-B PSP2P50109 593 aaKnown RBP2.12□□□□□ -2.07
YGR109W-BYGR109W-B TUB2P02557 457 aaKnown RBP2.12□□□□□ -2.07
YGR109W-BYGR109W-B UGA4P32837 571 aa2.12□□□□□ -2.07
YGR109W-BYGR109W-B PIN4P34217 668 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
YGR109W-BYGR109W-B SPP382Q06411 708 aaPredicted RBP2.12□□□□□ -2.07
YGR109W-BYGR109W-B APL1P27351 700 aa2.12□□□□□ -2.07
YGR109W-BYGR109W-B HXT13P39924 564 aa2.12□□□□□ -2.07
YGR109W-BYGR109W-B HXT17P53631 564 aa2.12□□□□□ -2.07
YGR109W-BYGR109W-B HXT15P54854 567 aa2.12□□□□□ -2.07
YGR109W-BYGR109W-B BNI1P41832 1953 aa2.12□□□□□ -2.07
YGR109W-BYGR109W-B MET10P39692 1035 aa2.11□□□□□ -2.07
YGR109W-BYGR109W-B TPO2P53283 614 aa2.11□□□□□ -2.07
YGR109W-BYGR109W-B VPS62P53285 467 aa2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms