RNA–Protein interactions for RNA: YGL006W

PMC1, Transcript of Vacuolar Ca2+ ATPase involved in depleting cytosol of Ca2+ ions, yeast

Gene PMC1, Length 3,522 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMC1	YGL006W	KAR3	P17119	729 aa		4.58	□□□□□ -1.68
PMC1	YGL006W	OSM1	P21375	501 aa	Known RBP	4.58	□□□□□ -1.68
PMC1	YGL006W	REC107	P21651	314 aa		4.58	□□□□□ -1.68
PMC1	YGL006W	SMC1	P32908	1225 aa		4.58	□□□□□ -1.68
PMC1	YGL006W	RFT1	P38206	574 aa	Predicted RBP	4.58	□□□□□ -1.68
PMC1	YGL006W	OSH3	P38713	996 aa	Known RBP	4.58	□□□□□ -1.68
PMC1	YGL006W	TDA11	P38854	504 aa		4.58	□□□□□ -1.68
PMC1	YGL006W	RPC17	P47076	161 aa		4.58	□□□□□ -1.68
PMC1	YGL006W	HOP2	P53187	214 aa		4.58	□□□□□ -1.68
PMC1	YGL006W	UBP16	Q02863	499 aa		4.58	□□□□□ -1.68
PMC1	YGL006W	ARO80	Q04052	950 aa		4.58	□□□□□ -1.68
PMC1	YGL006W	PNP1	Q05788	311 aa		4.58	□□□□□ -1.68
PMC1	YGL006W	GRX7	P38068	203 aa		4.58	□□□□□ -1.68
PMC1	YGL006W	VFA1	P40080	203 aa		4.58	□□□□□ -1.68
PMC1	YGL006W	IRC8	P47046	822 aa		4.58	□□□□□ -1.68
PMC1	YGL006W	JJJ1	P53863	590 aa		4.58	□□□□□ -1.68
PMC1	YGL006W	YAP7	Q08182	245 aa		4.58	□□□□□ -1.68
PMC1	YGL006W	APC1	P53886	1748 aa		4.57	□□□□□ -1.68
PMC1	YGL006W	USO1	P25386	1790 aa		4.57	□□□□□ -1.68
PMC1	YGL006W	CHO2	P05374	869 aa	Known RBP	4.57	□□□□□ -1.68
PMC1	YGL006W	PDR1	P12383	1068 aa		4.57	□□□□□ -1.68
PMC1	YGL006W	OPI1	P21957	404 aa		4.57	□□□□□ -1.68
PMC1	YGL006W	NGR1	P32831	672 aa	Known RBP	4.57	□□□□□ -1.68
PMC1	YGL006W	YKL091C	P33324	310 aa	Known RBP	4.57	□□□□□ -1.68
PMC1	YGL006W	ECM4	P36156	370 aa		4.57	□□□□□ -1.68
PMC1	YGL006W	UBP14	P38237	781 aa	Known RBP	4.57	□□□□□ -1.68
PMC1	YGL006W	VPS53	P47061	822 aa		4.57	□□□□□ -1.68
PMC1	YGL006W	MCM6	P53091	1017 aa	Known RBP	4.57	□□□□□ -1.68
PMC1	YGL006W	NGL3	Q03210	505 aa		4.57	□□□□□ -1.68
PMC1	YGL006W	YOR296W	Q08748	1289 aa		4.57	□□□□□ -1.68
PMC1	YGL006W	RUP1	Q12242	671 aa		4.57	□□□□□ -1.68
PMC1	YGL006W	RIB2	Q12362	591 aa	Known RBP	4.57	□□□□□ -1.68
PMC1	YGL006W	DBP10	Q12389	995 aa	Known RBP	4.57	□□□□□ -1.68
PMC1	YGL006W	YOR111W	Q99210	232 aa		4.57	□□□□□ -1.68
PMC1	YGL006W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
PMC1	YGL006W	CCM1	P48237	864 aa	Predicted RBP	4.57	□□□□□ -1.68
PMC1	YGL006W	VTI1	Q04338	217 aa		4.57	□□□□□ -1.68
PMC1	YGL006W	TFC6	Q06339	672 aa		4.57	□□□□□ -1.68
PMC1	YGL006W	BDF2	Q07442	638 aa		4.57	□□□□□ -1.68
PMC1	YGL006W	SLK19	Q08581	821 aa	Known RBP	4.57	□□□□□ -1.68
PMC1	YGL006W	RPL24A	P04449	155 aa	Known RBP	4.56	□□□□□ -1.68
PMC1	YGL006W	ARG82	P07250	355 aa		4.56	□□□□□ -1.68
PMC1	YGL006W	PPR1	P07272	904 aa	Predicted RBP	4.56	□□□□□ -1.68
PMC1	YGL006W	CKI1	P20485	582 aa		4.56	□□□□□ -1.68
PMC1	YGL006W	RPC19	P28000	142 aa	Known RBP	4.56	□□□□□ -1.68
PMC1	YGL006W	GPI10	P30777	616 aa		4.56	□□□□□ -1.68
PMC1	YGL006W	APL6	P46682	809 aa		4.56	□□□□□ -1.68
PMC1	YGL006W	FMS1	P50264	508 aa		4.56	□□□□□ -1.68
PMC1	YGL006W	PIG1	Q06216	648 aa		4.56	□□□□□ -1.68
PMC1	YGL006W	LAM4	P38800	1345 aa		4.56	□□□□□ -1.68
PMC1	YGL006W	TFC3	P34111	1160 aa		4.56	□□□□□ -1.68
PMC1	YGL006W	SEG2	P34250	1132 aa		4.56	□□□□□ -1.68
PMC1	YGL006W	BMH2	P34730	273 aa	Known RBP	4.56	□□□□□ -1.68
PMC1	YGL006W	YIL001W	P40560	513 aa		4.56	□□□□□ -1.68
PMC1	YGL006W	URB2	P47108	1174 aa		4.56	□□□□□ -1.68
PMC1	YGL006W	HFM1	P51979	1187 aa		4.56	□□□□□ -1.68
PMC1	YGL006W	NOP6	Q07623	225 aa	Known RBP	4.56	□□□□□ -1.68
PMC1	YGL006W	OXR1	Q08952	273 aa		4.56	□□□□□ -1.68
PMC1	YGL006W	DNF3	Q12674	1656 aa		4.56	□□□□□ -1.68
PMC1	YGL006W	MPH3	P0CE00	602 aa		4.56	□□□□□ -1.68
PMC1	YGL006W	COQ1	P18900	473 aa		4.56	□□□□□ -1.68
PMC1	YGL006W	EFB1	P32471	206 aa	Known RBP	4.56	□□□□□ -1.68
PMC1	YGL006W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
PMC1	YGL006W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
PMC1	YGL006W	ECM2	P38241	364 aa	Known RBP	4.56	□□□□□ -1.68
PMC1	YGL006W	CRG1	P38892	291 aa	RIP-Chip data	4.56	□□□□□ -1.68	not detected
PMC1	YGL006W	YNL320W	P42840	284 aa		4.56	□□□□□ -1.68
PMC1	YGL006W	TAF1	P46677	1066 aa		4.56	□□□□□ -1.68
PMC1	YGL006W	SGM1	P47166	707 aa		4.56	□□□□□ -1.68
PMC1	YGL006W	PXR1	P53335	271 aa	Predicted RBP	4.56	□□□□□ -1.68
PMC1	YGL006W	SPC24	Q04477	213 aa		4.56	□□□□□ -1.68
PMC1	YGL006W	GNT1	Q12096	491 aa		4.56	□□□□□ -1.68
PMC1	YGL006W	TAH18	Q12181	623 aa		4.56	□□□□□ -1.68
PMC1	YGL006W	ACE2	P21192	770 aa		4.55	□□□□□ -1.68
PMC1	YGL006W	STN1	P38960	494 aa		4.55	□□□□□ -1.68
PMC1	YGL006W	AIM20	P40451	204 aa		4.55	□□□□□ -1.68
PMC1	YGL006W	CUE3	P53137	624 aa	Known RBP	4.55	□□□□□ -1.68
PMC1	YGL006W	USA1	Q03714	838 aa		4.55	□□□□□ -1.68
PMC1	YGL006W	HFD1	Q04458	532 aa		4.55	□□□□□ -1.68
PMC1	YGL006W	DPL1	Q05567	589 aa		4.55	□□□□□ -1.68
PMC1	YGL006W	SSP2	Q08646	371 aa		4.55	□□□□□ -1.68
PMC1	YGL006W	YPR204W	Q08995	1032 aa		4.55	□□□□□ -1.68
PMC1	YGL006W	SEY1	Q99287	776 aa		4.55	□□□□□ -1.68
PMC1	YGL006W	SBP1	P10080	294 aa	Known RBP	4.55	□□□□□ -1.68
PMC1	YGL006W	BAS1	P22035	811 aa		4.55	□□□□□ -1.68
PMC1	YGL006W	RPC53	P25441	422 aa		4.55	□□□□□ -1.68
PMC1	YGL006W	PCI8	P40512	444 aa		4.55	□□□□□ -1.68
PMC1	YGL006W	LYS14	P40971	790 aa		4.55	□□□□□ -1.68
PMC1	YGL006W	IOC3	P43596	787 aa		4.55	□□□□□ -1.68
PMC1	YGL006W	TOS3	P43637	560 aa		4.55	□□□□□ -1.68
PMC1	YGL006W	PTA1	Q01329	785 aa	Predicted RBP	4.55	□□□□□ -1.68
PMC1	YGL006W	PRP42	Q03776	544 aa	Known RBP	4.55	□□□□□ -1.68
PMC1	YGL006W	TUM1	Q08686	304 aa	Known RBP	4.55	□□□□□ -1.68
PMC1	YGL006W	PTC5	Q12511	572 aa		4.55	□□□□□ -1.68
PMC1	YGL006W	MVD1	P32377	396 aa	Known RBP	4.55	□□□□□ -1.68
PMC1	YGL006W	BUD2	P33314	1104 aa		4.55	□□□□□ -1.68
PMC1	YGL006W	RTS1	P38903	757 aa		4.55	□□□□□ -1.68
PMC1	YGL006W	TOF1	P53840	1238 aa		4.55	□□□□□ -1.68
PMC1	YGL006W	LGE1	Q02796	332 aa	Known RBP	4.55	□□□□□ -1.68
PMC1	YGL006W	TAF9	Q05027	157 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms