RNA–Protein interactions for RNA: YFL045C

SEC53, Transcript of Phosphomannomutase, yeast

Gene SEC53, Length 765 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC53	YFL045C	SLD2	P34252	453 aa		4.59	□□□□□ -1.67
SEC53	YFL045C	GPT2	P36148	743 aa		4.59	□□□□□ -1.67
SEC53	YFL045C	RDH54	P38086	958 aa		4.59	□□□□□ -1.67
SEC53	YFL045C	VMR1	P38735	1592 aa		4.59	□□□□□ -1.67
SEC53	YFL045C	FAA3	P39002	694 aa		4.59	□□□□□ -1.67
SEC53	YFL045C	CHZ1	P40019	153 aa	Predicted RBP	4.59	□□□□□ -1.67
SEC53	YFL045C	ALO1	P54783	526 aa	Known RBP	4.59	□□□□□ -1.67
SEC53	YFL045C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
SEC53	YFL045C	GIC2	Q06648	383 aa		4.59	□□□□□ -1.67
SEC53	YFL045C	MED7	Q08278	222 aa		4.59	□□□□□ -1.67
SEC53	YFL045C	TRM3	Q07527	1436 aa		4.58	□□□□□ -1.68
SEC53	YFL045C	KAR2	P16474	682 aa	Known RBP	4.58	□□□□□ -1.68
SEC53	YFL045C	YAP3	P38749	330 aa		4.58	□□□□□ -1.68
SEC53	YFL045C	SHU2	P38957	223 aa		4.58	□□□□□ -1.68
SEC53	YFL045C	FUN12	P39730	1002 aa	Known RBP	4.58	□□□□□ -1.68
SEC53	YFL045C	MSH4	P40965	878 aa	Predicted RBP	4.58	□□□□□ -1.68
SEC53	YFL045C	THI12	P42883	340 aa		4.58	□□□□□ -1.68
SEC53	YFL045C	SLS1	P42900	643 aa		4.58	□□□□□ -1.68
SEC53	YFL045C	THI5	P43534	340 aa		4.58	□□□□□ -1.68
SEC53	YFL045C	THI11	P47183	340 aa		4.58	□□□□□ -1.68
SEC53	YFL045C	CTH1	P47976	325 aa		4.58	□□□□□ -1.68
SEC53	YFL045C	YGR045C	P53229	120 aa		4.58	□□□□□ -1.68
SEC53	YFL045C	TAF8	Q03750	510 aa		4.58	□□□□□ -1.68
SEC53	YFL045C	THI13	Q07748	340 aa		4.58	□□□□□ -1.68
SEC53	YFL045C	HEM13	P11353	328 aa	Known RBP	4.57	□□□□□ -1.68
SEC53	YFL045C	ATE1	P16639	503 aa		4.57	□□□□□ -1.68
SEC53	YFL045C	SUI2	P20459	304 aa	Known RBP	4.57	□□□□□ -1.68
SEC53	YFL045C	MSH3	P25336	1018 aa		4.57	□□□□□ -1.68
SEC53	YFL045C	RPT1	P33299	467 aa	Known RBP	4.57	□□□□□ -1.68
SEC53	YFL045C	YKL077W	P36081	392 aa		4.57	□□□□□ -1.68
SEC53	YFL045C	YFR016C	P43597	1233 aa	Known RBP	4.57	□□□□□ -1.68
SEC53	YFL045C	YJR107W	P47145	328 aa		4.57	□□□□□ -1.68
SEC53	YFL045C	ALT1	P52893	592 aa		4.57	□□□□□ -1.68
SEC53	YFL045C	YGR130C	P53278	816 aa		4.57	□□□□□ -1.68
SEC53	YFL045C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	RIP-Chip
SEC53	YFL045C	ADI1	Q03677	179 aa		4.57	□□□□□ -1.68
SEC53	YFL045C	UTP5	Q04177	643 aa	Known RBP	4.57	□□□□□ -1.68
SEC53	YFL045C	ALG6	Q12001	544 aa	Known RBP	4.57	□□□□□ -1.68
SEC53	YFL045C	RAD2	P07276	1031 aa		4.56	□□□□□ -1.68
SEC53	YFL045C	SEC23	P15303	768 aa	Known RBP	4.56	□□□□□ -1.68
SEC53	YFL045C	YEF3	P16521	1044 aa	Known RBP	4.56	□□□□□ -1.68
SEC53	YFL045C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	RIP-Chip
SEC53	YFL045C	PEX28	P38848	579 aa		4.56	□□□□□ -1.68
SEC53	YFL045C	PIC2	P40035	300 aa		4.56	□□□□□ -1.68
SEC53	YFL045C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
SEC53	YFL045C	YGR122W	P53272	402 aa		4.56	□□□□□ -1.68
SEC53	YFL045C	MAG2	Q06436	670 aa	Known RBP	4.56	□□□□□ -1.68
SEC53	YFL045C	OXR1	Q08952	273 aa		4.56	□□□□□ -1.68
SEC53	YFL045C	CHC1	P22137	1653 aa	Known RBP	4.56	□□□□□ -1.68
SEC53	YFL045C	IML1	P47170	1584 aa		4.56	□□□□□ -1.68
SEC53	YFL045C	VMA4	P22203	233 aa	Known RBP	4.55	□□□□□ -1.68
SEC53	YFL045C	EBP2	P36049	427 aa	Known RBP	4.55	□□□□□ -1.68
SEC53	YFL045C	OMA1	P36163	345 aa		4.55	□□□□□ -1.68
SEC53	YFL045C	TOS1	P38288	455 aa		4.55	□□□□□ -1.68
SEC53	YFL045C	MMM1	P41800	426 aa		4.55	□□□□□ -1.68
SEC53	YFL045C	YGL140C	P53120	1219 aa		4.55	□□□□□ -1.68
SEC53	YFL045C	GLT1	Q12680	2145 aa	Known RBP	4.55	□□□□□ -1.68
SEC53	YFL045C	CYC7	P00045	113 aa		4.54	□□□□□ -1.68
SEC53	YFL045C	GCD1	P09032	578 aa	Predicted RBP	4.54	□□□□□ -1.68
SEC53	YFL045C	RPS4A	P0CX35	261 aa	Known RBP	4.54	□□□□□ -1.68
SEC53	YFL045C	RPS4B	P0CX36	261 aa	Known RBP	4.54	□□□□□ -1.68
SEC53	YFL045C	HEM3	P28789	327 aa		4.54	□□□□□ -1.68
SEC53	YFL045C	SMY2	P32909	740 aa	Known RBP	4.54	□□□□□ -1.68
SEC53	YFL045C	WHI3	P34761	661 aa	Known RBP	4.54	□□□□□ -1.68
SEC53	YFL045C	SEA4	P38164	1038 aa		4.54	□□□□□ -1.68
SEC53	YFL045C	SNF7	P39929	240 aa	Known RBP	4.54	□□□□□ -1.68
SEC53	YFL045C	RTR1	P40084	226 aa	Predicted RBP	4.54	□□□□□ -1.68
SEC53	YFL045C	MTR4	P47047	1073 aa	Known RBP	4.54	□□□□□ -1.68
SEC53	YFL045C	MPP10	P47083	593 aa	Known RBP	4.54	□□□□□ -1.68
SEC53	YFL045C	POL32	P47110	350 aa		4.54	□□□□□ -1.68
SEC53	YFL045C	EAR1	Q03212	550 aa		4.54	□□□□□ -1.68
SEC53	YFL045C	SEC7	P11075	2009 aa	Known RBP	4.53	□□□□□ -1.68
SEC53	YFL045C	YRF1-1	P0CX20	1796 aa		4.53	□□□□□ -1.68
SEC53	YFL045C	YRF1-5	P0CX21	1796 aa		4.53	□□□□□ -1.68
SEC53	YFL045C	YRF1-8	P0CX22	1796 aa		4.53	□□□□□ -1.68
SEC53	YFL045C	CYC8	P14922	966 aa		4.53	□□□□□ -1.68
SEC53	YFL045C	MAC1	P35192	417 aa		4.53	□□□□□ -1.68
SEC53	YFL045C	NNK1	P36003	928 aa		4.53	□□□□□ -1.68
SEC53	YFL045C	TYS1	P36421	394 aa	Known RBP	4.53	□□□□□ -1.68
SEC53	YFL045C	OYE3	P41816	400 aa	Predicted RBP	4.53	□□□□□ -1.68
SEC53	YFL045C	CIT3	P43635	486 aa		4.53	□□□□□ -1.68
SEC53	YFL045C	RSM26	P47141	266 aa		4.53	□□□□□ -1.68
SEC53	YFL045C	ELA1	P53861	379 aa	Predicted RBP	4.53	□□□□□ -1.68
SEC53	YFL045C	PEX13	P80667	386 aa		4.53	□□□□□ -1.68
SEC53	YFL045C	RKM2	Q03942	479 aa		4.53	□□□□□ -1.68
SEC53	YFL045C	BRE4	Q07660	1125 aa		4.53	□□□□□ -1.68
SEC53	YFL045C	RAD9	P14737	1309 aa		4.52	□□□□□ -1.69
SEC53	YFL045C	BCK1	Q01389	1478 aa		4.52	□□□□□ -1.69
SEC53	YFL045C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
SEC53	YFL045C	PRE9	P23638	258 aa	Known RBP	4.52	□□□□□ -1.69
SEC53	YFL045C	SQT1	P35184	431 aa		4.52	□□□□□ -1.69
SEC53	YFL045C	YAR028W	P39548	234 aa		4.52	□□□□□ -1.69
SEC53	YFL045C	FYV10	P40492	516 aa		4.52	□□□□□ -1.69
SEC53	YFL045C	XKS1	P42826	600 aa		4.52	□□□□□ -1.69
SEC53	YFL045C	GNP1	P48813	663 aa		4.52	□□□□□ -1.69
SEC53	YFL045C	AVO1	Q08236	1176 aa		4.52	□□□□□ -1.69
SEC53	YFL045C	YOR059C	Q08448	450 aa	Known RBP	4.52	□□□□□ -1.69
SEC53	YFL045C	MCD1	Q12158	566 aa		4.52	□□□□□ -1.69
SEC53	YFL045C	YVC1	Q12324	675 aa		4.52	□□□□□ -1.69
SEC53	YFL045C	DNF2	Q12675	1612 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms