RNA–Protein interactions for RNA: YER104W

RTT105, Transcript of Protein with a role in regulation of Ty1 transposition, yeast

Gene RTT105, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTT105	YER104W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.11	□□□□□ -1.75
RTT105	YER104W	TY1A-DR6	P0CX70	440 aa		4.11	□□□□□ -1.75
RTT105	YER104W	TY1A-ER1	P0CX71	440 aa		4.11	□□□□□ -1.75
RTT105	YER104W	TY1A-LR2	P0CX72	440 aa		4.11	□□□□□ -1.75
RTT105	YER104W	TY1A-PL	P0CX73	440 aa		4.11	□□□□□ -1.75
RTT105	YER104W	TY1A-JR1	P0CX74	440 aa		4.11	□□□□□ -1.75
RTT105	YER104W	TY1A-LR3	P0CX75	440 aa		4.11	□□□□□ -1.75
RTT105	YER104W	TY1A-ML2	P0CX76	440 aa		4.11	□□□□□ -1.75
RTT105	YER104W	CWC24	P53769	259 aa		4.11	□□□□□ -1.75
RTT105	YER104W	DAL4	Q04895	635 aa		4.11	□□□□□ -1.75
RTT105	YER104W	URN1	Q06525	465 aa	Known RBP	4.11	□□□□□ -1.75
RTT105	YER104W	TY1A-GR1	Q12085	440 aa		4.11	□□□□□ -1.75
RTT105	YER104W	YOR131C	Q12486	218 aa		4.11	□□□□□ -1.75
RTT105	YER104W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.11	□□□□□ -1.75
RTT105	YER104W	TY1A-OL	Q92392	440 aa	Known RBP	4.11	□□□□□ -1.75
RTT105	YER104W	RAD2	P07276	1031 aa		4.1	□□□□□ -1.75
RTT105	YER104W	YHL012W	P38709	493 aa		4.1	□□□□□ -1.75
RTT105	YER104W	FAA3	P39002	694 aa		4.1	□□□□□ -1.75
RTT105	YER104W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
RTT105	YER104W	CDC53	Q12018	815 aa	Known RBP	4.1	□□□□□ -1.75
RTT105	YER104W	KAR2	P16474	682 aa	Known RBP	4.09	□□□□□ -1.75
RTT105	YER104W	PRP40	P33203	583 aa	Known RBP	4.09	□□□□□ -1.75
RTT105	YER104W	MDL2	P33311	773 aa		4.09	□□□□□ -1.75
RTT105	YER104W	NMD3	P38861	518 aa	Known RBP	4.09	□□□□□ -1.75
RTT105	YER104W	BUD6	P41697	788 aa		4.09	□□□□□ -1.75
RTT105	YER104W	POB3	Q04636	552 aa	Known RBP	4.09	□□□□□ -1.75
RTT105	YER104W	BDF2	Q07442	638 aa		4.09	□□□□□ -1.75
RTT105	YER104W	MCD1	Q12158	566 aa		4.09	□□□□□ -1.75
RTT105	YER104W	HCM1	P25364	564 aa		4.08	□□□□□ -1.76
RTT105	YER104W	AIM26	P32858	118 aa		4.08	□□□□□ -1.76
RTT105	YER104W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
RTT105	YER104W	ATG14	P38270	344 aa		4.08	□□□□□ -1.76
RTT105	YER104W	EXO5	P38289	585 aa		4.08	□□□□□ -1.76
RTT105	YER104W	MRPS18	P42847	217 aa		4.08	□□□□□ -1.76
RTT105	YER104W	MTR4	P47047	1073 aa	Known RBP	4.08	□□□□□ -1.76
RTT105	YER104W	NOG1	Q02892	647 aa	Known RBP	4.08	□□□□□ -1.76
RTT105	YER104W	GCN5	Q03330	439 aa		4.08	□□□□□ -1.76
RTT105	YER104W	UGA4	P32837	571 aa		4.07	□□□□□ -1.76
RTT105	YER104W	MEF2	P39677	819 aa		4.07	□□□□□ -1.76
RTT105	YER104W	AIM21	P40563	679 aa		4.07	□□□□□ -1.76
RTT105	YER104W	SLS1	P42900	643 aa		4.07	□□□□□ -1.76
RTT105	YER104W	ENV11	P53246	860 aa		4.07	□□□□□ -1.76
RTT105	YER104W	RTS3	P53289	263 aa		4.07	□□□□□ -1.76
RTT105	YER104W	SGD1	Q06132	899 aa		4.07	□□□□□ -1.76
RTT105	YER104W	YLR257W	Q06146	321 aa	Known RBP	4.07	□□□□□ -1.76
RTT105	YER104W	UBX5	Q06682	500 aa		4.07	□□□□□ -1.76
RTT105	YER104W	CDC34	P14682	295 aa		4.06	□□□□□ -1.76
RTT105	YER104W	RET1	P22276	1149 aa	Known RBP	4.06	□□□□□ -1.76
RTT105	YER104W	PRE9	P23638	258 aa	Known RBP	4.06	□□□□□ -1.76
RTT105	YER104W	MSH3	P25336	1018 aa		4.06	□□□□□ -1.76
RTT105	YER104W	TOM20	P35180	183 aa		4.06	□□□□□ -1.76
RTT105	YER104W	SQT1	P35184	431 aa		4.06	□□□□□ -1.76
RTT105	YER104W	HSE1	P38753	452 aa		4.06	□□□□□ -1.76
RTT105	YER104W	LAM1	P38851	1228 aa		4.06	□□□□□ -1.76
RTT105	YER104W	ATG36	P46983	293 aa		4.06	□□□□□ -1.76
RTT105	YER104W	RSM26	P47141	266 aa		4.06	□□□□□ -1.76
RTT105	YER104W	YGL081W	P53156	320 aa		4.06	□□□□□ -1.76
RTT105	YER104W	PEX13	P80667	386 aa		4.06	□□□□□ -1.76
RTT105	YER104W	ULP1	Q02724	621 aa		4.06	□□□□□ -1.76
RTT105	YER104W	NAN1	Q02931	896 aa	Known RBP	4.06	□□□□□ -1.76
RTT105	YER104W	GDE1	Q02979	1223 aa		4.06	□□□□□ -1.76
RTT105	YER104W	YPL109C	Q02981	657 aa		4.06	□□□□□ -1.76
RTT105	YER104W	ADI1	Q03677	179 aa		4.06	□□□□□ -1.76
RTT105	YER104W	VMA4	P22203	233 aa	Known RBP	4.05	□□□□□ -1.76
RTT105	YER104W	TSR4	P25040	408 aa		4.05	□□□□□ -1.76
RTT105	YER104W	GRX1	P25373	110 aa	Known RBP	4.05	□□□□□ -1.76
RTT105	YER104W	PMI40	P29952	429 aa	Known RBP	4.05	□□□□□ -1.76
RTT105	YER104W	NEM1	P38757	446 aa		4.05	□□□□□ -1.76
RTT105	YER104W	YAR028W	P39548	234 aa		4.05	□□□□□ -1.76
RTT105	YER104W	LAP2	Q10740	671 aa		4.05	□□□□□ -1.76
RTT105	YER104W	SSB1	P11484	613 aa	Known RBP	4.04	□□□□□ -1.76
RTT105	YER104W	SRO9	P25567	434 aa	Known RBP	4.04	□□□□□ -1.76
RTT105	YER104W	CHS7	P38843	316 aa		4.04	□□□□□ -1.76
RTT105	YER104W	MNN1	P39106	762 aa		4.04	□□□□□ -1.76
RTT105	YER104W	NUG1	P40010	520 aa	Known RBP	4.04	□□□□□ -1.76
RTT105	YER104W	SSB2	P40150	613 aa	Known RBP	4.04	□□□□□ -1.76
RTT105	YER104W	YJR008W	P47085	338 aa		4.04	□□□□□ -1.76
RTT105	YER104W	FAA4	P47912	694 aa	Known RBP	4.04	□□□□□ -1.76
RTT105	YER104W	HUL5	P53119	910 aa		4.04	□□□□□ -1.76
RTT105	YER104W	UTP5	Q04177	643 aa	Known RBP	4.04	□□□□□ -1.76
RTT105	YER104W	UTP14	Q04500	899 aa	Known RBP	4.04	□□□□□ -1.76
RTT105	YER104W	TDA5	Q06417	326 aa	Known RBP	4.04	□□□□□ -1.76
RTT105	YER104W	MET6	P05694	767 aa	Known RBP	4.03	□□□□□ -1.76
RTT105	YER104W	SPF1	P39986	1215 aa	Known RBP	4.03	□□□□□ -1.76
RTT105	YER104W	CHZ1	P40019	153 aa	Predicted RBP	4.03	□□□□□ -1.76
RTT105	YER104W	PIC2	P40035	300 aa		4.03	□□□□□ -1.76
RTT105	YER104W	NUP82	P40368	713 aa		4.03	□□□□□ -1.76
RTT105	YER104W	YGR053C	P53234	283 aa		4.03	□□□□□ -1.76
RTT105	YER104W	PPM2	Q08282	695 aa		4.03	□□□□□ -1.76
RTT105	YER104W	NTO1	Q12311	748 aa		4.03	□□□□□ -1.76
RTT105	YER104W	YGR161W-C	Q3E744	92 aa		4.03	□□□□□ -1.76
RTT105	YER104W	SPS1	P08458	490 aa		4.02	□□□□□ -1.77
RTT105	YER104W	RAD4	P14736	754 aa		4.02	□□□□□ -1.77
RTT105	YER104W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
RTT105	YER104W	DOM34	P33309	386 aa		4.02	□□□□□ -1.77
RTT105	YER104W	DUT1	P33317	147 aa		4.02	□□□□□ -1.77
RTT105	YER104W	PEX28	P38848	579 aa		4.02	□□□□□ -1.77
RTT105	YER104W	XKS1	P42826	600 aa		4.02	□□□□□ -1.77
RTT105	YER104W	TIM54	P47045	478 aa		4.02	□□□□□ -1.77
RTT105	YER104W	OPI10	Q08202	246 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms