RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C BMH1P29311 267 aaKnown RBP12.14□□□□□ -0.47
SPC25YER018C EUG1P32474 517 aa12.14□□□□□ -0.47
SPC25YER018C MCR1P36060 302 aaKnown RBP12.14□□□□□ -0.47
SPC25YER018C NPR3P38742 1146 aa12.14□□□□□ -0.47
SPC25YER018C ETP1P38748 585 aaKnown RBP12.14□□□□□ -0.47
SPC25YER018C ORC4P54791 529 aa12.14□□□□□ -0.47
SPC25YER018C OYE2Q03558 400 aaKnown RBP12.14□□□□□ -0.47
SPC25YER018C YLH47Q06493 454 aa12.14□□□□□ -0.47
SPC25YER018C GUD1Q07729 489 aa12.14□□□□□ -0.47
SPC25YER018C CDC19P00549 500 aaKnown RBP12.13□□□□□ -0.47
SPC25YER018C CDC15P27636 974 aa12.13□□□□□ -0.47
SPC25YER018C SAC6P32599 642 aaKnown RBP12.13□□□□□ -0.47
SPC25YER018C YGR153WP48238 217 aa12.13□□□□□ -0.47
SPC25YER018C UBA2P52488 636 aa12.13□□□□□ -0.47
SPC25YER018C RSC1P53236 928 aa12.13□□□□□ -0.47
SPC25YER018C MFM1Q02783 413 aa12.13□□□□□ -0.47
SPC25YER018C BUL2Q03758 920 aaKnown RBP12.13□□□□□ -0.47
SPC25YER018C TIF6Q12522 245 aaKnown RBP12.13□□□□□ -0.47
SPC25YER018C KNS1P32350 737 aaPredicted RBP12.12□□□□□ -0.47
SPC25YER018C SRP40P32583 406 aaPredicted RBP12.12□□□□□ -0.47
SPC25YER018C DAK2P43550 591 aa12.12□□□□□ -0.47
SPC25YER018C ADY4Q05955 493 aa12.12□□□□□ -0.47
SPC25YER018C YLR326WQ06170 240 aaKnown RBP12.12□□□□□ -0.47
SPC25YER018C SMC6Q12749 1114 aa12.12□□□□□ -0.47
SPC25YER018C TY1B-AO13527 1196 aaKnown RBP12.11□□□□□ -0.47
SPC25YER018C MOT2P34909 587 aaKnown RBP12.11□□□□□ -0.47
SPC25YER018C ISW1P38144 1129 aa12.11□□□□□ -0.47
SPC25YER018C YGR125WP53273 1036 aa12.11□□□□□ -0.47
SPC25YER018C SLD5Q03406 294 aa12.11□□□□□ -0.47
SPC25YER018C FKS1P38631 1876 aaKnown RBP12.1□□□□□ -0.47
SPC25YER018C PET10P36139 283 aa12.1□□□□□ -0.47
SPC25YER018C CBK1P53894 756 aa12.1□□□□□ -0.47
SPC25YER018C DUS4Q06063 367 aa12.1□□□□□ -0.47
SPC25YER018C TY3A-GQ12173 290 aa12.1□□□□□ -0.47
SPC25YER018C TY3A-IQ99219 290 aa12.1□□□□□ -0.47
SPC25YER018C RKM3P38222 552 aa12.09□□□□□ -0.47
SPC25YER018C RRM3P38766 723 aa12.09□□□□□ -0.47
SPC25YER018C NOC2P39744 710 aaKnown RBP12.09□□□□□ -0.47
SPC25YER018C CTR1P49573 406 aa12.09□□□□□ -0.47
SPC25YER018C ATG1P53104 897 aa12.09□□□□□ -0.47
SPC25YER018C HUL5P53119 910 aa12.09□□□□□ -0.47
SPC25YER018C PTA1Q01329 785 aaPredicted RBP12.09□□□□□ -0.47
SPC25YER018C SVF1Q05515 481 aa12.09□□□□□ -0.47
SPC25YER018C ISA1Q07821 250 aaPredicted RBP12.09□□□□□ -0.47
SPC25YER018C ERP3Q12403 225 aa12.09□□□□□ -0.47
SPC25YER018C RPL22AP05749 121 aaKnown RBP12.08□□□□□ -0.48
SPC25YER018C PGM1P33401 570 aaKnown RBP12.08□□□□□ -0.48
SPC25YER018C REG2P38232 338 aa12.08□□□□□ -0.48
SPC25YER018C THI6P41835 540 aa12.08□□□□□ -0.48
SPC25YER018C YGL039WP53183 348 aaKnown RBP12.08□□□□□ -0.48
SPC25YER018C CNM67P53865 581 aaKnown RBP12.08□□□□□ -0.48
SPC25YER018C PGA2P53903 129 aa12.08□□□□□ -0.48
SPC25YER018C WHI4Q07655 649 aaKnown RBP12.08□□□□□ -0.48
SPC25YER018C CKA2P19454 339 aa12.07□□□□□ -0.48
SPC25YER018C TKL1P23254 680 aaKnown RBP12.07□□□□□ -0.48
SPC25YER018C GSY2P27472 705 aa12.07□□□□□ -0.48
SPC25YER018C HIR1P32479 840 aa12.07□□□□□ -0.48
SPC25YER018C UBP11P36026 717 aa12.07□□□□□ -0.48
SPC25YER018C VPS29P38759 282 aa12.07□□□□□ -0.48
SPC25YER018C FYV10P40492 516 aa12.07□□□□□ -0.48
SPC25YER018C DIP5P53388 608 aa12.07□□□□□ -0.48
SPC25YER018C LCD1Q04377 747 aa12.07□□□□□ -0.48
SPC25YER018C FOB1O13329 566 aa12.06□□□□□ -0.48
SPC25YER018C ESS1P22696 170 aa12.06□□□□□ -0.48
SPC25YER018C CLB5P30283 435 aa12.06□□□□□ -0.48
SPC25YER018C VTC2P43585 828 aa12.06□□□□□ -0.48
SPC25YER018C YLR225CQ05948 407 aaKnown RBP12.06□□□□□ -0.48
SPC25YER018C TLG2Q08144 397 aa12.06□□□□□ -0.48
SPC25YER018C TOM1Q03280 3268 aa12.06□□□□□ -0.48
SPC25YER018C PGK1P00560 416 aaKnown RBP12.05□□□□□ -0.48
SPC25YER018C SUP45P12385 437 aaKnown RBP12.05□□□□□ -0.48
SPC25YER018C CLN3P13365 580 aa12.05□□□□□ -0.48
SPC25YER018C RAM2P29703 316 aa12.05□□□□□ -0.48
SPC25YER018C PIH1P38768 344 aa12.05□□□□□ -0.48
SPC25YER018C GPD2P41911 440 aaKnown RBP12.05□□□□□ -0.48
SPC25YER018C ROG3P43602 733 aa12.05□□□□□ -0.48
SPC25YER018C UBP15P50101 1230 aa12.05□□□□□ -0.48
SPC25YER018C DUS1P53759 423 aaKnown RBP12.05□□□□□ -0.48
SPC25YER018C SSL2Q00578 843 aa12.05□□□□□ -0.48
SPC25YER018C PHM6Q05637 104 aa12.05□□□□□ -0.48
SPC25YER018C CRD1Q07560 283 aa12.05□□□□□ -0.48
SPC25YER018C MSC6Q08818 692 aaKnown RBP12.05□□□□□ -0.48
SPC25YER018C YEL076C-AP0CX16 216 aa12.04□□□□□ -0.48
SPC25YER018C YLR464WP0CX17 216 aa12.04□□□□□ -0.48
SPC25YER018C TAF13P11747 167 aa12.04□□□□□ -0.48
SPC25YER018C ATE1P16639 503 aa12.04□□□□□ -0.48
SPC25YER018C SEC8P32855 1065 aa12.04□□□□□ -0.48
SPC25YER018C SIP3P38717 1229 aa12.04□□□□□ -0.48
SPC25YER018C YEL076CP39971 216 aa12.04□□□□□ -0.48
SPC25YER018C BRE2P43132 505 aa12.04□□□□□ -0.48
SPC25YER018C AFT2Q08957 416 aa12.04□□□□□ -0.48
SPC25YER018C YDR461C-AQ2V2P7 80 aa12.04□□□□□ -0.48
SPC25YER018C TFC4P33339 1025 aa12.03□□□□□ -0.48
SPC25YER018C ULP2P40537 1034 aaPredicted RBP12.03□□□□□ -0.48
SPC25YER018C ZPR1P53303 486 aaKnown RBP12.03□□□□□ -0.48
SPC25YER018C SRD1P09007 221 aa12.02□□□□□ -0.49
SPC25YER018C MIP1P15801 1254 aa12.02□□□□□ -0.49
SPC25YER018C ISY1P21374 235 aaPredicted RBP12.02□□□□□ -0.49
SPC25YER018C SUV3P32580 737 aa12.02□□□□□ -0.49
SPC25YER018C GUP1P53154 560 aa12.02□□□□□ -0.49
Retrieved 100 of 5,963 RNA–protein pairs in 58.9 ms