RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C HEM13P11353 328 aaKnown RBP6.18□□□□□ -1.42
NUP42YDR192C RER2P35196 286 aa6.18□□□□□ -1.42
NUP42YDR192C SLS1P42900 643 aa6.18□□□□□ -1.42
NUP42YDR192C NSE3Q05541 303 aa6.18□□□□□ -1.42
NUP42YDR192C AVO1Q08236 1176 aa6.18□□□□□ -1.42
NUP42YDR192C YOR131CQ12486 218 aa6.18□□□□□ -1.42
NUP42YDR192C AGP1P25376 633 aa6.17□□□□□ -1.42
NUP42YDR192C SYP1P25623 870 aaKnown RBP6.17□□□□□ -1.42
NUP42YDR192C SBA1P28707 216 aaKnown RBP6.17□□□□□ -1.42
NUP42YDR192C MKK2P32491 506 aa6.17□□□□□ -1.42
NUP42YDR192C SPF1P39986 1215 aaKnown RBP6.17□□□□□ -1.42
NUP42YDR192C ROD1Q02805 837 aa6.17□□□□□ -1.42
NUP42YDR192C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
NUP42YDR192C SHE9Q04172 456 aa6.17□□□□□ -1.42
NUP42YDR192C YOR223WQ12015 292 aa6.17□□□□□ -1.42
NUP42YDR192C SPO14P36126 1683 aa6.17□□□□□ -1.42
NUP42YDR192C DED1P06634 604 aaKnown RBP6.16□□□□□ -1.42
NUP42YDR192C PRI2P20457 528 aa6.16□□□□□ -1.42
NUP42YDR192C BAS1P22035 811 aa6.16□□□□□ -1.42
NUP42YDR192C GRX1P25373 110 aaKnown RBP6.16□□□□□ -1.42
NUP42YDR192C MRP8P35719 219 aa6.16□□□□□ -1.42
NUP42YDR192C YAR028WP39548 234 aa6.16□□□□□ -1.42
NUP42YDR192C CNN1P43618 361 aa6.16□□□□□ -1.42
NUP42YDR192C VPS53P47061 822 aa6.16□□□□□ -1.42
NUP42YDR192C YNR014WP53719 212 aa6.16□□□□□ -1.42
NUP42YDR192C REC8Q12188 680 aa6.16□□□□□ -1.42
NUP42YDR192C DBP5P20449 482 aaKnown RBP6.15□□□□□ -1.42
NUP42YDR192C BOI2P39969 1040 aa6.15□□□□□ -1.42
NUP42YDR192C HNT2P49775 206 aa6.15□□□□□ -1.42
NUP42YDR192C CDC53Q12018 815 aaKnown RBP6.15□□□□□ -1.42
NUP42YDR192C RKM4Q12504 494 aa6.15□□□□□ -1.42
NUP42YDR192C YKL091CP33324 310 aaKnown RBP6.14□□□□□ -1.43
NUP42YDR192C PIN4P34217 668 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
NUP42YDR192C RGD1P38339 666 aa6.14□□□□□ -1.43
NUP42YDR192C RRM3P38766 723 aa6.14□□□□□ -1.43
NUP42YDR192C NMD2P38798 1089 aaKnown RBP6.14□□□□□ -1.43
NUP42YDR192C SPO75Q07798 868 aa6.14□□□□□ -1.43
NUP42YDR192C ERS1P17261 260 aa6.13□□□□□ -1.43
NUP42YDR192C SFA1P32771 386 aa6.13□□□□□ -1.43
NUP42YDR192C IOC3P43596 787 aa6.13□□□□□ -1.43
NUP42YDR192C RPN4Q03465 531 aa6.13□□□□□ -1.43
NUP42YDR192C TIF35Q04067 274 aaKnown RBP6.13□□□□□ -1.43
NUP42YDR192C BDF2Q07442 638 aa6.13□□□□□ -1.43
NUP42YDR192C GEA1P47102 1408 aaPredicted RBP6.13□□□□□ -1.43
NUP42YDR192C SNT2P53127 1403 aa6.13□□□□□ -1.43
NUP42YDR192C VTH1P40438 1549 aa6.13□□□□□ -1.43
NUP42YDR192C VTH2P40890 1549 aa6.13□□□□□ -1.43
NUP42YDR192C ULS1Q08562 1619 aa6.13□□□□□ -1.43
NUP42YDR192C INO1P11986 533 aa6.12□□□□□ -1.43
NUP42YDR192C TRK2P28584 889 aa6.12□□□□□ -1.43
NUP42YDR192C YKL107WP34251 309 aa6.12□□□□□ -1.43
NUP42YDR192C NNK1P36003 928 aa6.12□□□□□ -1.43
NUP42YDR192C IRR1P40541 1150 aa6.12□□□□□ -1.43
NUP42YDR192C SPO74P45819 413 aa6.12□□□□□ -1.43
NUP42YDR192C DOT1Q04089 582 aaKnown RBP6.12□□□□□ -1.43
NUP42YDR192C OSH2Q12451 1283 aa6.12□□□□□ -1.43
NUP42YDR192C PTC5Q12511 572 aa6.12□□□□□ -1.43
NUP42YDR192C CAT8P39113 1433 aa6.11□□□□□ -1.43
NUP42YDR192C RAD4P14736 754 aa6.11□□□□□ -1.43
NUP42YDR192C YKL069WP36088 180 aa6.11□□□□□ -1.43
NUP42YDR192C MCM7P38132 845 aa6.11□□□□□ -1.43
NUP42YDR192C ALG3P38179 458 aa6.11□□□□□ -1.43
NUP42YDR192C TAT2P38967 592 aa6.11□□□□□ -1.43
NUP42YDR192C TIM54P47045 478 aa6.11□□□□□ -1.43
NUP42YDR192C KIP3P53086 805 aaKnown RBP6.11□□□□□ -1.43
NUP42YDR192C YGR045CP53229 120 aa6.11□□□□□ -1.43
NUP42YDR192C YNR063WP53749 607 aa6.11□□□□□ -1.43
NUP42YDR192C RAT1Q02792 1006 aaKnown RBP6.11□□□□□ -1.43
NUP42YDR192C HRK1Q08732 759 aaKnown RBP6.11□□□□□ -1.43
NUP42YDR192C YPL260WQ08977 551 aa6.11□□□□□ -1.43
NUP42YDR192C ALG6Q12001 544 aaKnown RBP6.11□□□□□ -1.43
NUP42YDR192C PRP9P19736 530 aaKnown RBP6.1□□□□□ -1.43
NUP42YDR192C RSC6P25632 483 aa6.1□□□□□ -1.43
NUP42YDR192C AFG2P32794 780 aa6.1□□□□□ -1.43
NUP42YDR192C PBY1P38254 753 aa6.1□□□□□ -1.43
NUP42YDR192C GNT1Q12096 491 aa6.1□□□□□ -1.43
NUP42YDR192C TY1A-NL1Q12391 440 aaKnown RBP6.1□□□□□ -1.43
NUP42YDR192C ABD1P32783 436 aaPredicted RBP6.09□□□□□ -1.43
NUP42YDR192C SMY2P32909 740 aaKnown RBP6.09□□□□□ -1.43
NUP42YDR192C VBA5P36172 582 aa6.09□□□□□ -1.43
NUP42YDR192C SEA4P38164 1038 aa6.09□□□□□ -1.43
NUP42YDR192C MCX1P38323 520 aaPredicted RBP6.09□□□□□ -1.43
NUP42YDR192C ELA1P53861 379 aaPredicted RBP6.09□□□□□ -1.43
NUP42YDR192C RSA3Q05942 220 aaKnown RBP6.09□□□□□ -1.43
NUP42YDR192C YLR225CQ05948 407 aaKnown RBP6.09□□□□□ -1.43
NUP42YDR192C AOS1Q06624 347 aa6.09□□□□□ -1.43
NUP42YDR192C QNS1P38795 714 aaKnown RBP6.08□□□□□ -1.44
NUP42YDR192C GGA2P38817 585 aaKnown RBP6.08□□□□□ -1.44
NUP42YDR192C CHZ1P40019 153 aaPredicted RBP6.08□□□□□ -1.44
NUP42YDR192C MPH1P40562 993 aa6.08□□□□□ -1.44
NUP42YDR192C HUL5P53119 910 aa6.08□□□□□ -1.44
NUP42YDR192C ERP6P53198 216 aa6.08□□□□□ -1.44
NUP42YDR192C TPO2P53283 614 aa6.08□□□□□ -1.44
NUP42YDR192C NCE103P53615 221 aa6.08□□□□□ -1.44
NUP42YDR192C DOS2P54858 310 aa6.08□□□□□ -1.44
NUP42YDR192C AI3P03877 415 aa6.07□□□□□ -1.44
NUP42YDR192C NFS1P25374 497 aa6.07□□□□□ -1.44
NUP42YDR192C YBR184WP38299 523 aa6.07□□□□□ -1.44
NUP42YDR192C PDR15Q04182 1529 aaKnown RBP6.07□□□□□ -1.44
NUP42YDR192C SBP1P10080 294 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms