RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeast

Gene CSN9, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSN9	YDR179C	YDR132C	Q03900	495 aa		3.38	□□□□□ -1.87
CSN9	YDR179C	AFG2	P32794	780 aa		3.37	□□□□□ -1.87
CSN9	YDR179C	RGD1	P38339	666 aa		3.37	□□□□□ -1.87
CSN9	YDR179C	FAA3	P39002	694 aa		3.37	□□□□□ -1.87
CSN9	YDR179C	MEF2	P39677	819 aa		3.37	□□□□□ -1.87
CSN9	YDR179C	PBP1	P53297	722 aa	Known RBP	3.37	□□□□□ -1.87
CSN9	YDR179C	SIW14	P53965	281 aa		3.37	□□□□□ -1.87
CSN9	YDR179C	GCN5	Q03330	439 aa		3.37	□□□□□ -1.87
CSN9	YDR179C	RSM24	Q03976	319 aa		3.37	□□□□□ -1.87
CSN9	YDR179C	SPO21	Q12411	609 aa		3.37	□□□□□ -1.87
CSN9	YDR179C	WHI5	Q12416	295 aa		3.37	□□□□□ -1.87
CSN9	YDR179C	DED1	P06634	604 aa	Known RBP	3.36	□□□□□ -1.87
CSN9	YDR179C	HEM13	P11353	328 aa	Known RBP	3.36	□□□□□ -1.87
CSN9	YDR179C	KIN2	P13186	1147 aa	Known RBP	3.36	□□□□□ -1.87
CSN9	YDR179C	RFC5	P38251	354 aa		3.36	□□□□□ -1.87
CSN9	YDR179C	MGE1	P38523	228 aa		3.36	□□□□□ -1.87
CSN9	YDR179C	TAT2	P38967	592 aa		3.36	□□□□□ -1.87
CSN9	YDR179C	PIC2	P40035	300 aa		3.36	□□□□□ -1.87
CSN9	YDR179C	SPT20	P50875	604 aa		3.36	□□□□□ -1.87
CSN9	YDR179C	CYC1	P00044	109 aa	Predicted RBP	3.35	□□□□□ -1.87
CSN9	YDR179C	TUB2	P02557	457 aa	Known RBP	3.35	□□□□□ -1.87
CSN9	YDR179C	SNF5	P18480	905 aa		3.35	□□□□□ -1.87
CSN9	YDR179C	CTS1	P29029	562 aa		3.35	□□□□□ -1.87
CSN9	YDR179C	SHM2	P37291	469 aa	Known RBP	3.35	□□□□□ -1.87
CSN9	YDR179C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	3.35	□□□□□ -1.87	not detected
CSN9	YDR179C	GPB2	P39717	880 aa		3.35	□□□□□ -1.87
CSN9	YDR179C	RCL1	Q08096	367 aa	Predicted RBP	3.35	□□□□□ -1.87
CSN9	YDR179C	STE11	P23561	717 aa		3.34	□□□□□ -1.87
CSN9	YDR179C	MKK2	P32491	506 aa		3.34	□□□□□ -1.87
CSN9	YDR179C	SEC8	P32855	1065 aa		3.34	□□□□□ -1.87
CSN9	YDR179C	TOS4	Q06266	489 aa		3.34	□□□□□ -1.87
CSN9	YDR179C	RXT3	Q07458	294 aa		3.34	□□□□□ -1.87
CSN9	YDR179C	RAD2	P07276	1031 aa		3.33	□□□□□ -1.88
CSN9	YDR179C	SYP1	P25623	870 aa	Known RBP	3.33	□□□□□ -1.88
CSN9	YDR179C	CNN1	P43618	361 aa		3.33	□□□□□ -1.88
CSN9	YDR179C	ATG13	Q06628	738 aa		3.33	□□□□□ -1.88
CSN9	YDR179C	THS1	P04801	734 aa	Known RBP	3.32	□□□□□ -1.88
CSN9	YDR179C	RPP2A	P05319	106 aa	Known RBP	3.32	□□□□□ -1.88
CSN9	YDR179C	CYC8	P14922	966 aa		3.32	□□□□□ -1.88
CSN9	YDR179C	TRM2	P33753	639 aa		3.32	□□□□□ -1.88
CSN9	YDR179C	IPL1	P38991	367 aa		3.32	□□□□□ -1.88
CSN9	YDR179C	RAT1	Q02792	1006 aa	Known RBP	3.32	□□□□□ -1.88
CSN9	YDR179C	ROD1	Q02805	837 aa		3.32	□□□□□ -1.88
CSN9	YDR179C	SIZ1	Q04195	904 aa		3.32	□□□□□ -1.88
CSN9	YDR179C	MRL1	Q06815	381 aa		3.32	□□□□□ -1.88
CSN9	YDR179C	SVS1	Q12254	260 aa		3.32	□□□□□ -1.88
CSN9	YDR179C	PNS1	Q12412	539 aa		3.32	□□□□□ -1.88
CSN9	YDR179C	DBP5	P20449	482 aa	Known RBP	3.31	□□□□□ -1.88
CSN9	YDR179C	RAD27	P26793	382 aa		3.31	□□□□□ -1.88
CSN9	YDR179C	MNN10	P50108	393 aa	Known RBP	3.31	□□□□□ -1.88
CSN9	YDR179C	SEN54	Q02825	467 aa	Predicted RBP	3.31	□□□□□ -1.88
CSN9	YDR179C	ROT1	Q03691	256 aa		3.31	□□□□□ -1.88
CSN9	YDR179C	DUS4	Q06063	367 aa		3.31	□□□□□ -1.88
CSN9	YDR179C	ACK1	Q07622	623 aa	Predicted RBP	3.31	□□□□□ -1.88
CSN9	YDR179C	GAL10	P04397	699 aa		3.3	□□□□□ -1.88
CSN9	YDR179C	CMP2	P14747	604 aa		3.3	□□□□□ -1.88
CSN9	YDR179C	HXT13	P39924	564 aa		3.3	□□□□□ -1.88
CSN9	YDR179C	RRT14	P40470	206 aa		3.3	□□□□□ -1.88
CSN9	YDR179C	HXT17	P53631	564 aa		3.3	□□□□□ -1.88
CSN9	YDR179C	HXT15	P54854	567 aa		3.3	□□□□□ -1.88
CSN9	YDR179C	RMD1	Q03441	430 aa		3.3	□□□□□ -1.88
CSN9	YDR179C	ESF1	Q06344	628 aa	Known RBP	3.3	□□□□□ -1.88
CSN9	YDR179C	GPB1	Q08886	897 aa		3.3	□□□□□ -1.88
CSN9	YDR179C	TMA46	Q12000	345 aa	Known RBP	3.3	□□□□□ -1.88
CSN9	YDR179C	GNT1	Q12096	491 aa		3.3	□□□□□ -1.88
CSN9	YDR179C	YER152C	P10356	443 aa		3.29	□□□□□ -1.88
CSN9	YDR179C	BAS1	P22035	811 aa		3.29	□□□□□ -1.88
CSN9	YDR179C	CDC20	P26309	610 aa		3.29	□□□□□ -1.88
CSN9	YDR179C	APL1	P27351	700 aa		3.29	□□□□□ -1.88
CSN9	YDR179C	MLS1	P30952	554 aa		3.29	□□□□□ -1.88
CSN9	YDR179C	GEM1	P39722	662 aa		3.29	□□□□□ -1.88
CSN9	YDR179C	RPS26A	P39938	119 aa	Known RBP	3.29	□□□□□ -1.88
CSN9	YDR179C	RPS26B	P39939	119 aa	Known RBP	3.29	□□□□□ -1.88
CSN9	YDR179C	GNP1	P48813	663 aa		3.29	□□□□□ -1.88
CSN9	YDR179C	SLI1	P53304	468 aa		3.29	□□□□□ -1.88
CSN9	YDR179C	RTT10	Q08924	1013 aa		3.29	□□□□□ -1.88
CSN9	YDR179C	HCM1	P25364	564 aa		3.28	□□□□□ -1.88
CSN9	YDR179C	PMI40	P29952	429 aa	Known RBP	3.28	□□□□□ -1.88
CSN9	YDR179C	ASF1	P32447	279 aa		3.28	□□□□□ -1.88
CSN9	YDR179C	SNF7	P39929	240 aa	Known RBP	3.28	□□□□□ -1.88
CSN9	YDR179C	MPH1	P40562	993 aa		3.28	□□□□□ -1.88
CSN9	YDR179C	IOC3	P43596	787 aa		3.28	□□□□□ -1.88
CSN9	YDR179C	POL32	P47110	350 aa		3.28	□□□□□ -1.88
CSN9	YDR179C	PLB2	Q03674	706 aa		3.28	□□□□□ -1.88
CSN9	YDR179C	NOP12	Q08208	459 aa	Known RBP	3.28	□□□□□ -1.88
CSN9	YDR179C	ACM1	Q08981	209 aa		3.28	□□□□□ -1.88
CSN9	YDR179C	PUS9	Q12069	462 aa		3.28	□□□□□ -1.88
CSN9	YDR179C	GCR1	P07261	785 aa		3.27	□□□□□ -1.89
CSN9	YDR179C	ACE2	P21192	770 aa		3.27	□□□□□ -1.89
CSN9	YDR179C	YJR107W	P47145	328 aa		3.27	□□□□□ -1.89
CSN9	YDR179C	MSE1	P48525	536 aa		3.27	□□□□□ -1.89
CSN9	YDR179C	VPS62	P53285	467 aa		3.27	□□□□□ -1.89
CSN9	YDR179C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	3.27	□□□□□ -1.89	not detected
CSN9	YDR179C	MSC2	Q03455	724 aa		3.27	□□□□□ -1.89
CSN9	YDR179C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	3.27	□□□□□ -1.89	not detected
CSN9	YDR179C	CDC6	P09119	513 aa		3.26	□□□□□ -1.89
CSN9	YDR179C	SRM1	P21827	482 aa		3.26	□□□□□ -1.89
CSN9	YDR179C	LST4	P34239	828 aa		3.26	□□□□□ -1.89
CSN9	YDR179C	UGA2	P38067	497 aa		3.26	□□□□□ -1.89
CSN9	YDR179C	MCM6	P53091	1017 aa	Known RBP	3.26	□□□□□ -1.89

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms