RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W FAA3P39002 694 aa6.13□□□□□ -1.43
FOB1YDR110W YER034WP40022 185 aaKnown RBP6.13□□□□□ -1.43
FOB1YDR110W MDE1P47095 244 aa6.13□□□□□ -1.43
FOB1YDR110W SHE10P53075 577 aa6.13□□□□□ -1.43
FOB1YDR110W NPY1P53164 384 aa6.13□□□□□ -1.43
FOB1YDR110W YNR063WP53749 607 aa6.13□□□□□ -1.43
FOB1YDR110W DBP9Q06218 594 aaKnown RBP6.13□□□□□ -1.43
FOB1YDR110W AOS1Q06624 347 aa6.13□□□□□ -1.43
FOB1YDR110W MRN1Q08925 612 aaKnown RBP RIP-Chip data6.13□□□□□ -1.43not detected
FOB1YDR110W BMS1Q08965 1183 aaKnown RBP6.13□□□□□ -1.43
FOB1YDR110W MET5P47169 1442 aa6.12□□□□□ -1.43
FOB1YDR110W YMR084WA2P2R3 262 aa6.12□□□□□ -1.43
FOB1YDR110W RPC40P07703 335 aaKnown RBP6.12□□□□□ -1.43
FOB1YDR110W RPL8BP29453 256 aaKnown RBP6.12□□□□□ -1.43
FOB1YDR110W RAD16P31244 790 aa6.12□□□□□ -1.43
FOB1YDR110W TFB1P32776 642 aa6.12□□□□□ -1.43
FOB1YDR110W NIC96P34077 839 aa6.12□□□□□ -1.43
FOB1YDR110W RIM4P38741 713 aa6.12□□□□□ -1.43
FOB1YDR110W MVP1P40959 511 aaKnown RBP6.12□□□□□ -1.43
FOB1YDR110W ERR3P42222 437 aa6.12□□□□□ -1.43
FOB1YDR110W VTC4P47075 721 aa6.12□□□□□ -1.43
FOB1YDR110W GYP7P48365 746 aa6.12□□□□□ -1.43
FOB1YDR110W MAL11P53048 616 aa6.12□□□□□ -1.43
FOB1YDR110W SPO1P53541 631 aa6.12□□□□□ -1.43
FOB1YDR110W NAF1P53919 492 aaKnown RBP6.12□□□□□ -1.43
FOB1YDR110W YLL054CQ12244 843 aa6.12□□□□□ -1.43
FOB1YDR110W HAA1Q12753 694 aaKnown RBP6.12□□□□□ -1.43
FOB1YDR110W HXK1P04806 485 aaKnown RBP6.11□□□□□ -1.43
FOB1YDR110W SUI2P20459 304 aaKnown RBP6.11□□□□□ -1.43
FOB1YDR110W SUV3P32580 737 aa6.11□□□□□ -1.43
FOB1YDR110W GGA2P38817 585 aaKnown RBP6.11□□□□□ -1.43
FOB1YDR110W JEM1P40358 645 aa6.11□□□□□ -1.43
FOB1YDR110W RIC1P40395 1056 aa6.11□□□□□ -1.43
FOB1YDR110W YFR006WP43590 535 aa6.11□□□□□ -1.43
FOB1YDR110W YML6P51998 286 aa6.11□□□□□ -1.43
FOB1YDR110W VPS4P52917 437 aa6.11□□□□□ -1.43
FOB1YDR110W UGO1Q03327 502 aa6.11□□□□□ -1.43
FOB1YDR110W MLC2Q06580 163 aa6.11□□□□□ -1.43
FOB1YDR110W TRE2Q08693 809 aa6.11□□□□□ -1.43
FOB1YDR110W REX3Q12090 404 aa6.11□□□□□ -1.43
FOB1YDR110W SCM3Q12334 223 aa6.11□□□□□ -1.43
FOB1YDR110W STU1P38198 1513 aa6.11□□□□□ -1.43
FOB1YDR110W MMS22Q06164 1454 aa6.11□□□□□ -1.43
FOB1YDR110W SUP35P05453 685 aaKnown RBP6.11□□□□□ -1.43
FOB1YDR110W SAN1P22470 610 aa6.11□□□□□ -1.43
FOB1YDR110W GCD6P32501 712 aaKnown RBP6.11□□□□□ -1.43
FOB1YDR110W ORC2P32833 620 aa6.11□□□□□ -1.43
FOB1YDR110W BEM3P32873 1128 aa6.11□□□□□ -1.43
FOB1YDR110W VPS35P34110 944 aa6.11□□□□□ -1.43
FOB1YDR110W YKL133CP36066 463 aa6.11□□□□□ -1.43
FOB1YDR110W YHL008CP38750 627 aa6.11□□□□□ -1.43
FOB1YDR110W RRG1Q12167 365 aaPredicted RBP6.11□□□□□ -1.43
FOB1YDR110W HSH49Q99181 213 aaPredicted RBP6.11□□□□□ -1.43
FOB1YDR110W RPA190P10964 1664 aaKnown RBP6.1□□□□□ -1.43
FOB1YDR110W YOR1P53049 1477 aa6.1□□□□□ -1.43
FOB1YDR110W STF1P01098 86 aa6.1□□□□□ -1.43
FOB1YDR110W KAR2P16474 682 aaKnown RBP6.1□□□□□ -1.43
FOB1YDR110W BUD31P25337 157 aaPredicted RBP6.1□□□□□ -1.43
FOB1YDR110W KCC4P25389 1037 aa6.1□□□□□ -1.43
FOB1YDR110W CNS1P33313 385 aa6.1□□□□□ -1.43
FOB1YDR110W UBS1P38290 277 aa6.1□□□□□ -1.43
FOB1YDR110W HSM3P38348 480 aa6.1□□□□□ -1.43
FOB1YDR110W PCL7P40186 285 aa6.1□□□□□ -1.43
FOB1YDR110W SPR3P41901 512 aa6.1□□□□□ -1.43
FOB1YDR110W YGR130CP53278 816 aa6.1□□□□□ -1.43
FOB1YDR110W YAP1802P53309 568 aa6.1□□□□□ -1.43
FOB1YDR110W TRS130Q03660 1102 aa6.1□□□□□ -1.43
FOB1YDR110W ATG20Q07528 640 aa6.1□□□□□ -1.43
FOB1YDR110W YLR001CQ07895 862 aa6.1□□□□□ -1.43
FOB1YDR110W ETT1Q08421 412 aaKnown RBP6.1□□□□□ -1.43
FOB1YDR110W SMF3Q12078 473 aaPredicted RBP6.1□□□□□ -1.43
FOB1YDR110W SMC6Q12749 1114 aa6.1□□□□□ -1.43
FOB1YDR110W TRS33Q99394 268 aa6.1□□□□□ -1.43
FOB1YDR110W SMC4Q12267 1418 aa6.09□□□□□ -1.43
FOB1YDR110W SEC2P17065 759 aa6.09□□□□□ -1.43
FOB1YDR110W FUR1P18562 216 aaKnown RBP6.09□□□□□ -1.43
FOB1YDR110W HSP60P19882 572 aaKnown RBP6.09□□□□□ -1.43
FOB1YDR110W TRX1P22217 103 aaKnown RBP6.09□□□□□ -1.43
FOB1YDR110W SRP72P38688 640 aaKnown RBP6.09□□□□□ -1.43
FOB1YDR110W HIS6P40545 261 aa6.09□□□□□ -1.43
FOB1YDR110W CIT3P43635 486 aa6.09□□□□□ -1.43
FOB1YDR110W CCT8P47079 568 aaKnown RBP6.09□□□□□ -1.43
FOB1YDR110W UPF3P48412 387 aaKnown RBP6.09□□□□□ -1.43
FOB1YDR110W ISM1P48526 1002 aa6.09□□□□□ -1.43
FOB1YDR110W GTR1Q00582 310 aa6.09□□□□□ -1.43
FOB1YDR110W CWC21Q03375 135 aaKnown RBP6.09□□□□□ -1.43
FOB1YDR110W PRP42Q03776 544 aaKnown RBP6.09□□□□□ -1.43
FOB1YDR110W TAF11Q04226 346 aa6.09□□□□□ -1.43
FOB1YDR110W YKU80Q04437 629 aa6.09□□□□□ -1.43
FOB1YDR110W YMR111CQ04461 462 aaPredicted RBP6.09□□□□□ -1.43
FOB1YDR110W EIS1Q05050 843 aaKnown RBP6.09□□□□□ -1.43
FOB1YDR110W RGA2Q06407 1009 aa6.09□□□□□ -1.43
FOB1YDR110W OPY2Q06810 360 aa6.09□□□□□ -1.43
FOB1YDR110W PPQ1P32945 549 aa6.08□□□□□ -1.44
FOB1YDR110W RPC37P36121 282 aa6.08□□□□□ -1.44
FOB1YDR110W BET3P36149 193 aa6.08□□□□□ -1.44
FOB1YDR110W TYS1P36421 394 aaKnown RBP6.08□□□□□ -1.44
FOB1YDR110W ACA1P39970 489 aa6.08□□□□□ -1.44
FOB1YDR110W HXT8P40886 569 aa6.08□□□□□ -1.44
FOB1YDR110W LAM5P43560 674 aa6.08□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 244 ms