RNA–Protein interactions for RNA: YDL223C

HBT1, Transcript of Shmoo tip protein, substrate of Hub1p ubiquitin-like protein, yeast

Gene HBT1, Length 3,141 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HBT1	YDL223C	AFT1	P22149	690 aa		4.09	□□□□□ -1.75
HBT1	YDL223C	RAT1	Q02792	1006 aa	Known RBP	4.09	□□□□□ -1.75
HBT1	YDL223C	PMT7	Q06644	662 aa		4.09	□□□□□ -1.75
HBT1	YDL223C	SBP1	P10080	294 aa	Known RBP	4.08	□□□□□ -1.76
HBT1	YDL223C	LYP1	P32487	611 aa		4.08	□□□□□ -1.76
HBT1	YDL223C	SQT1	P35184	431 aa		4.08	□□□□□ -1.76
HBT1	YDL223C	ECM2	P38241	364 aa	Known RBP	4.08	□□□□□ -1.76
HBT1	YDL223C	CRP1	P38845	465 aa	Known RBP	4.08	□□□□□ -1.76
HBT1	YDL223C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
HBT1	YDL223C	SIW14	P53965	281 aa		4.08	□□□□□ -1.76
HBT1	YDL223C	TIF35	Q04067	274 aa	Known RBP	4.08	□□□□□ -1.76
HBT1	YDL223C	TOP3	P13099	656 aa		4.08	□□□□□ -1.76
HBT1	YDL223C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
HBT1	YDL223C	MSH4	P40965	878 aa	Predicted RBP	4.08	□□□□□ -1.76
HBT1	YDL223C	YJL181W	P46987	611 aa		4.08	□□□□□ -1.76
HBT1	YDL223C	DED1	P06634	604 aa	Known RBP	4.08	□□□□□ -1.76
HBT1	YDL223C	MKK2	P32491	506 aa		4.08	□□□□□ -1.76
HBT1	YDL223C	EAF1	Q06337	982 aa		4.08	□□□□□ -1.76
HBT1	YDL223C	TMA46	Q12000	345 aa	Known RBP	4.08	□□□□□ -1.76
HBT1	YDL223C	INO1	P11986	533 aa		4.07	□□□□□ -1.76
HBT1	YDL223C	MEF1	P25039	761 aa		4.07	□□□□□ -1.76
HBT1	YDL223C	MSH2	P25847	964 aa		4.07	□□□□□ -1.76
HBT1	YDL223C	MRPL16	P38064	232 aa		4.07	□□□□□ -1.76
HBT1	YDL223C	IRR1	P40541	1150 aa		4.07	□□□□□ -1.76
HBT1	YDL223C	VTC4	P47075	721 aa		4.07	□□□□□ -1.76
HBT1	YDL223C	FOL1	P53848	824 aa		4.07	□□□□□ -1.76
HBT1	YDL223C	SHE9	Q04172	456 aa		4.07	□□□□□ -1.76
HBT1	YDL223C	CDC4	P07834	779 aa		4.07	□□□□□ -1.76
HBT1	YDL223C	HSP60	P19882	572 aa	Known RBP	4.07	□□□□□ -1.76
HBT1	YDL223C	ARE1	P25628	610 aa		4.07	□□□□□ -1.76
HBT1	YDL223C	ENP1	P38333	483 aa	Known RBP	4.07	□□□□□ -1.76
HBT1	YDL223C	MSC7	P38694	644 aa		4.07	□□□□□ -1.76
HBT1	YDL223C	PMC1	P38929	1173 aa	Predicted RBP	4.07	□□□□□ -1.76
HBT1	YDL223C	YJR120W	P47157	116 aa		4.06	□□□□□ -1.76
HBT1	YDL223C	UTP8	P53276	713 aa	Known RBP	4.06	□□□□□ -1.76
HBT1	YDL223C	NAM8	Q00539	523 aa	Known RBP	4.06	□□□□□ -1.76
HBT1	YDL223C	ATG13	Q06628	738 aa		4.06	□□□□□ -1.76
HBT1	YDL223C	TCB1	Q12466	1186 aa		4.06	□□□□□ -1.76
HBT1	YDL223C	FUS1	P11710	512 aa		4.06	□□□□□ -1.76
HBT1	YDL223C	SBA1	P28707	216 aa	Known RBP	4.06	□□□□□ -1.76
HBT1	YDL223C	HBS1	P32769	611 aa	Known RBP	4.06	□□□□□ -1.76
HBT1	YDL223C	NEM1	P38757	446 aa		4.06	□□□□□ -1.76
HBT1	YDL223C	YER156C	P40093	338 aa	Known RBP	4.06	□□□□□ -1.76
HBT1	YDL223C	SLS1	P42900	643 aa		4.06	□□□□□ -1.76
HBT1	YDL223C	YNR065C	P53751	1116 aa		4.06	□□□□□ -1.76
HBT1	YDL223C	AOS1	Q06624	347 aa		4.06	□□□□□ -1.76
HBT1	YDL223C	OSH2	Q12451	1283 aa		4.06	□□□□□ -1.76
HBT1	YDL223C	CDC19	P00549	500 aa	Known RBP	4.06	□□□□□ -1.76
HBT1	YDL223C	GAL11	P19659	1081 aa		4.06	□□□□□ -1.76
HBT1	YDL223C	AFG2	P32794	780 aa		4.06	□□□□□ -1.76
HBT1	YDL223C	LSB6	P42951	607 aa		4.06	□□□□□ -1.76
HBT1	YDL223C	ALR2	P43553	858 aa		4.06	□□□□□ -1.76
HBT1	YDL223C	YJR124C	P47159	448 aa		4.06	□□□□□ -1.76
HBT1	YDL223C	SPO75	Q07798	868 aa		4.06	□□□□□ -1.76
HBT1	YDL223C	PAN5	P38787	379 aa		4.05	□□□□□ -1.76
HBT1	YDL223C	SIP5	P40210	489 aa	Known RBP	4.05	□□□□□ -1.76
HBT1	YDL223C	INP51	P40559	946 aa	Known RBP	4.05	□□□□□ -1.76
HBT1	YDL223C	MRP8	P35719	219 aa		4.05	□□□□□ -1.76
HBT1	YDL223C	TYS1	P36421	394 aa	Known RBP	4.05	□□□□□ -1.76
HBT1	YDL223C	YGL176C	P46945	554 aa		4.05	□□□□□ -1.76
HBT1	YDL223C	GPG1	P53130	126 aa		4.05	□□□□□ -1.76
HBT1	YDL223C	BIO5	P53744	561 aa	Known RBP	4.05	□□□□□ -1.76
HBT1	YDL223C	BUD21	Q08492	214 aa	Predicted RBP	4.05	□□□□□ -1.76
HBT1	YDL223C	TFB2	Q02939	513 aa		4.04	□□□□□ -1.76
HBT1	YDL223C	RAD27	P26793	382 aa		4.04	□□□□□ -1.76
HBT1	YDL223C	XDJ1	P39102	459 aa		4.04	□□□□□ -1.76
HBT1	YDL223C	UTP5	Q04177	643 aa	Known RBP	4.04	□□□□□ -1.76
HBT1	YDL223C	HBN1	Q96VH4	193 aa		4.04	□□□□□ -1.76
HBT1	YDL223C	PDR5	P33302	1511 aa	Known RBP	4.04	□□□□□ -1.76
HBT1	YDL223C	HTS1	P07263	546 aa	Known RBP	4.04	□□□□□ -1.76
HBT1	YDL223C	ERT1	P38140	529 aa		4.04	□□□□□ -1.76
HBT1	YDL223C	PBY1	P38254	753 aa		4.04	□□□□□ -1.76
HBT1	YDL223C	GDH3	P39708	457 aa		4.04	□□□□□ -1.76
HBT1	YDL223C	ERP6	P53198	216 aa		4.04	□□□□□ -1.76
HBT1	YDL223C	HST3	P53687	447 aa		4.04	□□□□□ -1.76
HBT1	YDL223C	SPO20	Q04359	397 aa		4.04	□□□□□ -1.76
HBT1	YDL223C	YBR284W	P38150	797 aa		4.03	□□□□□ -1.76
HBT1	YDL223C	HSV2	P50079	448 aa	Predicted RBP	4.03	□□□□□ -1.76
HBT1	YDL223C	UBP15	P50101	1230 aa		4.03	□□□□□ -1.76
HBT1	YDL223C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
HBT1	YDL223C	SIS1	P25294	352 aa	Known RBP	4.03	□□□□□ -1.76
HBT1	YDL223C	BCK2	P33306	851 aa		4.03	□□□□□ -1.76
HBT1	YDL223C	YBR287W	P38355	427 aa		4.03	□□□□□ -1.76
HBT1	YDL223C	TPM2	P40414	161 aa		4.03	□□□□□ -1.76
HBT1	YDL223C	EST2	Q06163	884 aa		4.03	□□□□□ -1.76
HBT1	YDL223C	SRF1	Q12516	437 aa		4.03	□□□□□ -1.76
HBT1	YDL223C	NCL1	P38205	684 aa	Known RBP	4.02	□□□□□ -1.77
HBT1	YDL223C	GGA2	P38817	585 aa	Known RBP	4.02	□□□□□ -1.77
HBT1	YDL223C	NUP85	P46673	744 aa		4.02	□□□□□ -1.77
HBT1	YDL223C	SYP1	P25623	870 aa	Known RBP	4.02	□□□□□ -1.77
HBT1	YDL223C	CDC11	P32458	415 aa		4.02	□□□□□ -1.77
HBT1	YDL223C	MPH1	P40562	993 aa		4.02	□□□□□ -1.77
HBT1	YDL223C	SEC26	P41810	973 aa	Known RBP	4.02	□□□□□ -1.77
HBT1	YDL223C	PEX8	P53248	589 aa		4.02	□□□□□ -1.77
HBT1	YDL223C	UTP14	Q04500	899 aa	Known RBP	4.02	□□□□□ -1.77
HBT1	YDL223C	PRK1	P40494	810 aa		4.01	□□□□□ -1.77
HBT1	YDL223C	YLR001C	Q07895	862 aa		4.01	□□□□□ -1.77
HBT1	YDL223C	TMA17	Q12513	150 aa		4.01	□□□□□ -1.77
HBT1	YDL223C	YGL081W	P53156	320 aa		4.01	□□□□□ -1.77
HBT1	YDL223C	HAS1	Q03532	505 aa	Known RBP	4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 17 ms