RNA–Protein interactions for RNA: YDL213C

NOP6, Transcript of rRNA-binding protein required for 40S ribosomal subunit biogenesis, yeast

Gene NOP6, Length 678 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOP6	YDL213C	UTR2	P32623	467 aa		4.58	□□□□□ -1.68
NOP6	YDL213C	UGA4	P32837	571 aa		4.58	□□□□□ -1.68
NOP6	YDL213C	APL2	P36000	726 aa	Predicted RBP	4.58	□□□□□ -1.68
NOP6	YDL213C	IRS4	P36115	615 aa	Known RBP	4.58	□□□□□ -1.68
NOP6	YDL213C	SEA4	P38164	1038 aa		4.58	□□□□□ -1.68
NOP6	YDL213C	RIM4	P38741	713 aa		4.58	□□□□□ -1.68
NOP6	YDL213C	CEM1	P39525	442 aa		4.58	□□□□□ -1.68
NOP6	YDL213C	SDA1	P53313	767 aa	Known RBP	4.58	□□□□□ -1.68
NOP6	YDL213C	SPC19	Q03954	165 aa		4.58	□□□□□ -1.68
NOP6	YDL213C	SXM1	Q04175	944 aa	Known RBP	4.58	□□□□□ -1.68
NOP6	YDL213C	HFD1	Q04458	532 aa		4.58	□□□□□ -1.68
NOP6	YDL213C	TSR2	Q06672	205 aa	Known RBP	4.58	□□□□□ -1.68
NOP6	YDL213C	TRP2	P00899	507 aa	Known RBP	4.57	□□□□□ -1.68
NOP6	YDL213C	LYP1	P32487	611 aa		4.57	□□□□□ -1.68
NOP6	YDL213C	ABD1	P32783	436 aa	Predicted RBP	4.57	□□□□□ -1.68
NOP6	YDL213C	HSP78	P33416	811 aa		4.57	□□□□□ -1.68
NOP6	YDL213C	RRN3	P36070	627 aa		4.57	□□□□□ -1.68
NOP6	YDL213C	LDH1	P38139	375 aa		4.57	□□□□□ -1.68
NOP6	YDL213C	RRP8	P38961	392 aa	Known RBP	4.57	□□□□□ -1.68
NOP6	YDL213C	PSY2	P40164	858 aa		4.57	□□□□□ -1.68
NOP6	YDL213C	YML131W	Q03102	365 aa		4.57	□□□□□ -1.68
NOP6	YDL213C	MLC2	Q06580	163 aa		4.57	□□□□□ -1.68
NOP6	YDL213C	YPR053C	Q6Q5F3	151 aa		4.57	□□□□□ -1.68
NOP6	YDL213C	MDM12	Q92328	271 aa		4.57	□□□□□ -1.68
NOP6	YDL213C	PRP5	P21372	849 aa	Predicted RBP	4.56	□□□□□ -1.68
NOP6	YDL213C	MEF1	P25039	761 aa		4.56	□□□□□ -1.68
NOP6	YDL213C	TFC4	P33339	1025 aa		4.56	□□□□□ -1.68
NOP6	YDL213C	BAP2	P38084	609 aa		4.56	□□□□□ -1.68
NOP6	YDL213C	TBS1	P38114	1094 aa		4.56	□□□□□ -1.68
NOP6	YDL213C	SKN7	P38889	622 aa		4.56	□□□□□ -1.68
NOP6	YDL213C	FIR1	P40020	876 aa		4.56	□□□□□ -1.68
NOP6	YDL213C	MGS1	P40151	587 aa		4.56	□□□□□ -1.68
NOP6	YDL213C	SAP185	P40856	1058 aa		4.56	□□□□□ -1.68
NOP6	YDL213C	XKS1	P42826	600 aa		4.56	□□□□□ -1.68
NOP6	YDL213C	ALR2	P43553	858 aa		4.56	□□□□□ -1.68
NOP6	YDL213C	RGD2	P43556	714 aa		4.56	□□□□□ -1.68
NOP6	YDL213C	PBP1	P53297	722 aa	Known RBP	4.56	□□□□□ -1.68
NOP6	YDL213C	BUL2	Q03758	920 aa	Known RBP	4.56	□□□□□ -1.68
NOP6	YDL213C	VIP1	Q06685	1146 aa	Known RBP	4.56	□□□□□ -1.68
NOP6	YDL213C	REH1	Q06709	432 aa		4.56	□□□□□ -1.68
NOP6	YDL213C	SYT1	Q06836	1226 aa		4.56	□□□□□ -1.68
NOP6	YDL213C	CMR1	Q12510	522 aa	Known RBP	4.56	□□□□□ -1.68
NOP6	YDL213C	TIF6	Q12522	245 aa	Known RBP	4.56	□□□□□ -1.68
NOP6	YDL213C	VPS5	Q92331	675 aa		4.56	□□□□□ -1.68
NOP6	YDL213C	YOL087C	Q99247	1116 aa		4.56	□□□□□ -1.68
NOP6	YDL213C	GSY1	P23337	708 aa		4.55	□□□□□ -1.68
NOP6	YDL213C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
NOP6	YDL213C	IMP2'	P32351	346 aa		4.55	□□□□□ -1.68
NOP6	YDL213C	NIC96	P34077	839 aa		4.55	□□□□□ -1.68
NOP6	YDL213C	YKL133C	P36066	463 aa		4.55	□□□□□ -1.68
NOP6	YDL213C	TYS1	P36421	394 aa	Known RBP	4.55	□□□□□ -1.68
NOP6	YDL213C	DYS1	P38791	387 aa		4.55	□□□□□ -1.68
NOP6	YDL213C	NMD3	P38861	518 aa	Known RBP	4.55	□□□□□ -1.68
NOP6	YDL213C	NDE1	P40215	560 aa		4.55	□□□□□ -1.68
NOP6	YDL213C	SBE2	P42223	864 aa	Known RBP	4.55	□□□□□ -1.68
NOP6	YDL213C	RSC8	P43609	557 aa	Known RBP	4.55	□□□□□ -1.68
NOP6	YDL213C	MTR4	P47047	1073 aa	Known RBP	4.55	□□□□□ -1.68
NOP6	YDL213C	ENT3	P47160	408 aa		4.55	□□□□□ -1.68
NOP6	YDL213C	UBA2	P52488	636 aa		4.55	□□□□□ -1.68
NOP6	YDL213C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
NOP6	YDL213C	ISU1	Q03020	165 aa		4.55	□□□□□ -1.68
NOP6	YDL213C	MSH6	Q03834	1242 aa		4.55	□□□□□ -1.68
NOP6	YDL213C	YPQ2	Q06328	317 aa		4.55	□□□□□ -1.68
NOP6	YDL213C	UTP4	Q06679	776 aa	Known RBP	4.55	□□□□□ -1.68
NOP6	YDL213C	GRC3	Q07845	632 aa		4.55	□□□□□ -1.68
NOP6	YDL213C	SPS1	P08458	490 aa		4.54	□□□□□ -1.68
NOP6	YDL213C	SEC23	P15303	768 aa	Known RBP	4.54	□□□□□ -1.68
NOP6	YDL213C	DIT1	P21623	536 aa		4.54	□□□□□ -1.68
NOP6	YDL213C	MKK2	P32491	506 aa		4.54	□□□□□ -1.68
NOP6	YDL213C	SCT1	P32784	759 aa		4.54	□□□□□ -1.68
NOP6	YDL213C	DSS1	P39112	969 aa		4.54	□□□□□ -1.68
NOP6	YDL213C	ESL1	P40456	1118 aa		4.54	□□□□□ -1.68
NOP6	YDL213C	MNT3	P40549	630 aa		4.54	□□□□□ -1.68
NOP6	YDL213C	SEC26	P41810	973 aa	Known RBP	4.54	□□□□□ -1.68
NOP6	YDL213C	DUG1	P43616	481 aa	Known RBP	4.54	□□□□□ -1.68
NOP6	YDL213C	NUT1	P53114	1132 aa		4.54	□□□□□ -1.68
NOP6	YDL213C	MTQ2	Q03920	221 aa	Predicted RBP	4.54	□□□□□ -1.68
NOP6	YDL213C	OPY2	Q06810	360 aa		4.54	□□□□□ -1.68
NOP6	YDL213C	NEW1	Q08972	1196 aa	Known RBP	4.54	□□□□□ -1.68
NOP6	YDL213C	MED1	Q12321	566 aa		4.54	□□□□□ -1.68
NOP6	YDL213C	MSN1	P22148	382 aa		4.53	□□□□□ -1.68
NOP6	YDL213C	SQT1	P35184	431 aa		4.53	□□□□□ -1.68
NOP6	YDL213C	RER2	P35196	286 aa		4.53	□□□□□ -1.68
NOP6	YDL213C	RKM3	P38222	552 aa		4.53	□□□□□ -1.68
NOP6	YDL213C	YBR287W	P38355	427 aa		4.53	□□□□□ -1.68
NOP6	YDL213C	RVS167	P39743	482 aa	Known RBP	4.53	□□□□□ -1.68
NOP6	YDL213C	HXT13	P39924	564 aa		4.53	□□□□□ -1.68
NOP6	YDL213C	SUM1	P46676	1062 aa		4.53	□□□□□ -1.68
NOP6	YDL213C	TAN1	P53072	289 aa	Predicted RBP	4.53	□□□□□ -1.68
NOP6	YDL213C	MON1	P53129	644 aa		4.53	□□□□□ -1.68
NOP6	YDL213C	HXT17	P53631	564 aa		4.53	□□□□□ -1.68
NOP6	YDL213C	SIW14	P53965	281 aa		4.53	□□□□□ -1.68
NOP6	YDL213C	HXT15	P54854	567 aa		4.53	□□□□□ -1.68
NOP6	YDL213C	ADE12	P80210	433 aa	Known RBP	4.53	□□□□□ -1.68
NOP6	YDL213C	SNP1	Q00916	300 aa	Predicted RBP	4.53	□□□□□ -1.68
NOP6	YDL213C	YMR265C	Q03508	461 aa	Known RBP	4.53	□□□□□ -1.68
NOP6	YDL213C	YLR225C	Q05948	407 aa	Known RBP	4.53	□□□□□ -1.68
NOP6	YDL213C	TDA6	Q06466	467 aa		4.53	□□□□□ -1.68
NOP6	YDL213C	SSP2	Q08646	371 aa		4.53	□□□□□ -1.68
NOP6	YDL213C	NHA1	Q99271	985 aa		4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 39.4 ms