RNA–Protein interactions for RNA: YDL080C

THI3, Transcript of Regulatory protein that binds Pdc2p and Thi2p transcription factors, yeast

Gene THI3, Length 1,830 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
THI3	YDL080C	ATG3	P40344	310 aa		9.13	□□□□□ -0.95
THI3	YDL080C	YGR273C	P53329	174 aa		9.13	□□□□□ -0.95
THI3	YDL080C	AIM33	Q04516	312 aa		9.13	□□□□□ -0.95
THI3	YDL080C	VIP1	Q06685	1146 aa	Known RBP	9.13	□□□□□ -0.95
THI3	YDL080C	CWC2	Q12046	339 aa	Predicted RBP	9.13	□□□□□ -0.95
THI3	YDL080C	KIN1	P13185	1064 aa		9.12	□□□□□ -0.95
THI3	YDL080C	SPO12	P17123	173 aa		9.12	□□□□□ -0.95
THI3	YDL080C	ISY1	P21374	235 aa	Predicted RBP	9.12	□□□□□ -0.95
THI3	YDL080C	STV1	P37296	890 aa		9.12	□□□□□ -0.95
THI3	YDL080C	EFM2	P38347	419 aa		9.12	□□□□□ -0.95
THI3	YDL080C	UTP7	P40055	554 aa	Known RBP	9.12	□□□□□ -0.95
THI3	YDL080C	YEL076C-A	P0CX16	216 aa		9.12	□□□□□ -0.95
THI3	YDL080C	YLR464W	P0CX17	216 aa		9.12	□□□□□ -0.95
THI3	YDL080C	RPL8A	P17076	256 aa	Known RBP	9.12	□□□□□ -0.95
THI3	YDL080C	CST26	P38226	397 aa		9.12	□□□□□ -0.95
THI3	YDL080C	NDT80	P38830	627 aa		9.12	□□□□□ -0.95
THI3	YDL080C	YEL076C	P39971	216 aa		9.12	□□□□□ -0.95
THI3	YDL080C	YER156C	P40093	338 aa	Known RBP	9.12	□□□□□ -0.95
THI3	YDL080C	CBK1	P53894	756 aa		9.12	□□□□□ -0.95
THI3	YDL080C	ERG5	P54781	538 aa		9.12	□□□□□ -0.95
THI3	YDL080C	SEN54	Q02825	467 aa	Predicted RBP	9.12	□□□□□ -0.95
THI3	YDL080C	UME1	Q03010	460 aa		9.12	□□□□□ -0.95
THI3	YDL080C	YLR287C	Q05881	355 aa		9.12	□□□□□ -0.95
THI3	YDL080C	OXR1	Q08952	273 aa		9.12	□□□□□ -0.95
THI3	YDL080C	GSY1	P23337	708 aa		9.11	□□□□□ -0.95
THI3	YDL080C	SHQ1	P40486	507 aa	Predicted RBP	9.11	□□□□□ -0.95
THI3	YDL080C	LAP2	Q10740	671 aa		9.11	□□□□□ -0.95
THI3	YDL080C	OM45	P16547	393 aa		9.1	□□□□□ -0.95
THI3	YDL080C	REI1	P38344	393 aa	Predicted RBP	9.1	□□□□□ -0.95
THI3	YDL080C	GAA1	P39012	614 aa		9.1	□□□□□ -0.95
THI3	YDL080C	VFA1	P40080	203 aa		9.1	□□□□□ -0.95
THI3	YDL080C	RRB1	Q04225	511 aa	Known RBP	9.1	□□□□□ -0.95
THI3	YDL080C	UTP4	Q06679	776 aa	Known RBP	9.1	□□□□□ -0.95
THI3	YDL080C	SPO75	Q07798	868 aa		9.1	□□□□□ -0.95
THI3	YDL080C	FKS1	P38631	1876 aa	Known RBP	9.1	□□□□□ -0.95
THI3	YDL080C	PMA1	P05030	918 aa	Known RBP	9.1	□□□□□ -0.95
THI3	YDL080C	MTF2	P10849	440 aa		9.1	□□□□□ -0.95
THI3	YDL080C	SEC23	P15303	768 aa	Known RBP	9.1	□□□□□ -0.95
THI3	YDL080C	STE11	P23561	717 aa		9.1	□□□□□ -0.95
THI3	YDL080C	SHC1	P39000	512 aa		9.1	□□□□□ -0.95
THI3	YDL080C	PES4	P39684	611 aa		9.1	□□□□□ -0.95
THI3	YDL080C	NDC80	P40460	691 aa		9.1	□□□□□ -0.95
THI3	YDL080C	VPS4	P52917	437 aa		9.1	□□□□□ -0.95
THI3	YDL080C	BOP3	P53958	396 aa		9.1	□□□□□ -0.95
THI3	YDL080C	SML1	Q04964	104 aa		9.1	□□□□□ -0.95
THI3	YDL080C	SMC6	Q12749	1114 aa		9.1	□□□□□ -0.95
THI3	YDL080C	TUB2	P02557	457 aa	Known RBP	9.09	□□□□□ -0.95
THI3	YDL080C	GAP1	P19145	602 aa	Predicted RBP	9.09	□□□□□ -0.95
THI3	YDL080C	CKA2	P19454	339 aa		9.09	□□□□□ -0.95
THI3	YDL080C	SPT21	P35209	758 aa		9.09	□□□□□ -0.95
THI3	YDL080C	PPS1	P38148	807 aa		9.09	□□□□□ -0.95
THI3	YDL080C	RBA50	Q04418	439 aa		9.09	□□□□□ -0.95
THI3	YDL080C	YLH47	Q06493	454 aa		9.09	□□□□□ -0.95
THI3	YDL080C	RAM2	P29703	316 aa		9.08	□□□□□ -0.96
THI3	YDL080C	KEL1	P38853	1164 aa	Known RBP	9.08	□□□□□ -0.96
THI3	YDL080C	GUP1	P53154	560 aa		9.08	□□□□□ -0.96
THI3	YDL080C	TRM44	Q02648	567 aa	Known RBP	9.08	□□□□□ -0.96
THI3	YDL080C	CRF1	Q04930	467 aa		9.08	□□□□□ -0.96
THI3	YDL080C	PPR1	P07272	904 aa	Predicted RBP	9.08	□□□□□ -0.96
THI3	YDL080C	PDC6	P26263	563 aa	Known RBP	9.08	□□□□□ -0.96
THI3	YDL080C	SUL1	P38359	859 aa		9.08	□□□□□ -0.96
THI3	YDL080C	PAN5	P38787	379 aa		9.08	□□□□□ -0.96
THI3	YDL080C	EFM4	P40516	257 aa		9.08	□□□□□ -0.96
THI3	YDL080C	EMP47	P43555	445 aa		9.08	□□□□□ -0.96
THI3	YDL080C	IES1	P43579	692 aa		9.08	□□□□□ -0.96
THI3	YDL080C	TOS3	P43637	560 aa		9.08	□□□□□ -0.96
THI3	YDL080C	LSB1	P53281	241 aa		9.08	□□□□□ -0.96
THI3	YDL080C	BUL2	Q03758	920 aa	Known RBP	9.08	□□□□□ -0.96
THI3	YDL080C	ILV1	P00927	576 aa	Known RBP	9.07	□□□□□ -0.96
THI3	YDL080C	KRS1	P15180	591 aa	Known RBP	9.07	□□□□□ -0.96
THI3	YDL080C	RAD53	P22216	821 aa		9.07	□□□□□ -0.96
THI3	YDL080C	RAD57	P25301	460 aa		9.07	□□□□□ -0.96
THI3	YDL080C	DPB3	P27344	201 aa		9.07	□□□□□ -0.96
THI3	YDL080C	MCX1	P38323	520 aa	Predicted RBP	9.07	□□□□□ -0.96
THI3	YDL080C	PIH1	P38768	344 aa		9.07	□□□□□ -0.96
THI3	YDL080C	CIN4	P39110	191 aa		9.07	□□□□□ -0.96
THI3	YDL080C	YAP5	P40574	245 aa		9.07	□□□□□ -0.96
THI3	YDL080C	UTP5	Q04177	643 aa	Known RBP	9.07	□□□□□ -0.96
THI3	YDL080C	VAC14	Q06708	880 aa		9.07	□□□□□ -0.96
THI3	YDL080C	YLR001C	Q07895	862 aa		9.07	□□□□□ -0.96
THI3	YDL080C	NEW1	Q08972	1196 aa	Known RBP	9.07	□□□□□ -0.96
THI3	YDL080C	NOP14	Q99207	810 aa	Known RBP	9.07	□□□□□ -0.96
THI3	YDL080C	SRO9	P25567	434 aa	Known RBP	9.06	□□□□□ -0.96
THI3	YDL080C	UBP5	P39944	805 aa		9.06	□□□□□ -0.96
THI3	YDL080C	BIM1	P40013	344 aa		9.06	□□□□□ -0.96
THI3	YDL080C	FMS1	P50264	508 aa		9.06	□□□□□ -0.96
THI3	YDL080C	PGA2	P53903	129 aa		9.06	□□□□□ -0.96
THI3	YDL080C	TOM70	P07213	617 aa	Known RBP	9.05	□□□□□ -0.96
THI3	YDL080C	MSM1	P22438	575 aa		9.05	□□□□□ -0.96
THI3	YDL080C	PWP2	P25635	923 aa	Known RBP	9.05	□□□□□ -0.96
THI3	YDL080C	SEC20	P28791	383 aa		9.05	□□□□□ -0.96
THI3	YDL080C	HUL4	P40985	892 aa		9.05	□□□□□ -0.96
THI3	YDL080C	SNU71	P53207	620 aa	Known RBP	9.05	□□□□□ -0.96
THI3	YDL080C	MFM1	Q02783	413 aa		9.05	□□□□□ -0.96
THI3	YDL080C	AAD16	Q02895	342 aa		9.05	□□□□□ -0.96
THI3	YDL080C	YDL057W	Q07379	328 aa		9.05	□□□□□ -0.96
THI3	YDL080C	YKL068W-A	Q3E826	78 aa		9.05	□□□□□ -0.96
THI3	YDL080C	TUP1	P16649	713 aa		9.05	□□□□□ -0.96
THI3	YDL080C	RPC53	P25441	422 aa		9.05	□□□□□ -0.96
THI3	YDL080C	SIP3	P38717	1229 aa		9.05	□□□□□ -0.96

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms