RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C JHD1P40034 492 aa7.88□□□□□ -1.15
LDB7YBL006C AIM9P40053 627 aaKnown RBP7.88□□□□□ -1.15
LDB7YBL006C SPO22P40511 975 aa7.88□□□□□ -1.15
LDB7YBL006C RSC8P43609 557 aaKnown RBP7.88□□□□□ -1.15
LDB7YBL006C OXR1Q08952 273 aa7.88□□□□□ -1.15
LDB7YBL006C MET6P05694 767 aaKnown RBP7.87□□□□□ -1.15
LDB7YBL006C SES1P07284 462 aaKnown RBP7.87□□□□□ -1.15
LDB7YBL006C STI1P15705 589 aaKnown RBP RIP-Chip data7.87□□□□□ -1.15not detected
LDB7YBL006C MAK11P20484 414 aaKnown RBP7.87□□□□□ -1.15
LDB7YBL006C IRE1P32361 1115 aa7.87□□□□□ -1.15
LDB7YBL006C CCT3P39077 534 aaKnown RBP7.87□□□□□ -1.15
LDB7YBL006C HMF1P40037 129 aaKnown RBP7.87□□□□□ -1.15
LDB7YBL006C INP51P40559 946 aaKnown RBP7.87□□□□□ -1.15
LDB7YBL006C AFT1P22149 690 aa7.86□□□□□ -1.15
LDB7YBL006C FBP26P32604 452 aa7.86□□□□□ -1.15
LDB7YBL006C UBP11P36026 717 aa7.86□□□□□ -1.15
LDB7YBL006C TVP38P36164 337 aa7.86□□□□□ -1.15
LDB7YBL006C ORC4P54791 529 aa7.86□□□□□ -1.15
LDB7YBL006C OYE2Q03558 400 aaKnown RBP7.86□□□□□ -1.15
LDB7YBL006C ISW1P38144 1129 aa7.85□□□□□ -1.15
LDB7YBL006C RXT2P38255 430 aa7.85□□□□□ -1.15
LDB7YBL006C ALD5P40047 520 aaKnown RBP7.85□□□□□ -1.15
LDB7YBL006C VID28P40547 921 aa7.85□□□□□ -1.15
LDB7YBL006C GPI13Q07830 1017 aa7.85□□□□□ -1.15
LDB7YBL006C SIS2P36024 562 aa7.84□□□□□ -1.15
LDB7YBL006C GUA1P38625 525 aaKnown RBP7.84□□□□□ -1.15
LDB7YBL006C YHR131CP38835 850 aa7.84□□□□□ -1.15
LDB7YBL006C PCI8P40512 444 aa7.84□□□□□ -1.15
LDB7YBL006C MCM6P53091 1017 aaKnown RBP7.84□□□□□ -1.15
LDB7YBL006C HUL5P53119 910 aa7.84□□□□□ -1.15
LDB7YBL006C YGL138CP53122 345 aa7.84□□□□□ -1.15
LDB7YBL006C CUS1Q02554 436 aaPredicted RBP7.84□□□□□ -1.15
LDB7YBL006C GDE1Q02979 1223 aa7.84□□□□□ -1.15
LDB7YBL006C PGK1P00560 416 aaKnown RBP7.83□□□□□ -1.16
LDB7YBL006C SWI6P09959 803 aa7.83□□□□□ -1.16
LDB7YBL006C MATALPHA2P0CY08 210 aa7.83□□□□□ -1.16
LDB7YBL006C HMLALPHA2P0CY09 210 aa7.83□□□□□ -1.16
LDB7YBL006C ESS1P22696 170 aa7.83□□□□□ -1.16
LDB7YBL006C SWI4P25302 1093 aaKnown RBP7.83□□□□□ -1.16
LDB7YBL006C RME1P32338 300 aaKnown RBP7.83□□□□□ -1.16
LDB7YBL006C BMH2P34730 273 aaKnown RBP7.83□□□□□ -1.16
LDB7YBL006C YEL025CP39991 1188 aa7.83□□□□□ -1.16
LDB7YBL006C EPL1P43572 832 aa7.83□□□□□ -1.16
LDB7YBL006C SAD1P43589 448 aa7.83□□□□□ -1.16
LDB7YBL006C PSP2P50109 593 aaKnown RBP7.83□□□□□ -1.16
LDB7YBL006C SCY1P53009 804 aa7.83□□□□□ -1.16
LDB7YBL006C YGR035CP53222 116 aa7.83□□□□□ -1.16
LDB7YBL006C YGR273CP53329 174 aa7.83□□□□□ -1.16
LDB7YBL006C AIM33Q04516 312 aa7.83□□□□□ -1.16
LDB7YBL006C CRD1Q07560 283 aa7.83□□□□□ -1.16
LDB7YBL006C TRL1P09880 827 aaKnown RBP7.82□□□□□ -1.16
LDB7YBL006C SRO9P25567 434 aaKnown RBP7.82□□□□□ -1.16
LDB7YBL006C FUB1P25659 250 aa7.82□□□□□ -1.16
LDB7YBL006C MSS51P32335 436 aa7.82□□□□□ -1.16
LDB7YBL006C SMY2P32909 740 aaKnown RBP7.82□□□□□ -1.16
LDB7YBL006C GPD2P41911 440 aaKnown RBP7.82□□□□□ -1.16
LDB7YBL006C CIT3P43635 486 aa7.82□□□□□ -1.16
LDB7YBL006C SPO74P45819 413 aa7.82□□□□□ -1.16
LDB7YBL006C MDR1P53258 950 aa7.82□□□□□ -1.16
LDB7YBL006C BNI5P53890 448 aaKnown RBP7.82□□□□□ -1.16
LDB7YBL006C GIS4Q04233 774 aa7.82□□□□□ -1.16
LDB7YBL006C PHM6Q05637 104 aa7.82□□□□□ -1.16
LDB7YBL006C SMD2Q06217 110 aaKnown RBP7.82□□□□□ -1.16
LDB7YBL006C SAS3P34218 831 aa7.81□□□□□ -1.16
LDB7YBL006C GAA1P39012 614 aa7.81□□□□□ -1.16
LDB7YBL006C ZPR1P53303 486 aaKnown RBP7.81□□□□□ -1.16
LDB7YBL006C ILV1P00927 576 aaKnown RBP7.8□□□□□ -1.16
LDB7YBL006C HCA4P20448 770 aaKnown RBP7.8□□□□□ -1.16
LDB7YBL006C SUV3P32580 737 aa7.8□□□□□ -1.16
LDB7YBL006C OPY1P38271 328 aa7.8□□□□□ -1.16
LDB7YBL006C RPN10P38886 268 aaKnown RBP7.8□□□□□ -1.16
LDB7YBL006C KRI1P42846 591 aaKnown RBP7.8□□□□□ -1.16
LDB7YBL006C YKE2P52553 114 aa7.8□□□□□ -1.16
LDB7YBL006C RET3P53600 189 aa7.8□□□□□ -1.16
LDB7YBL006C EMI2Q04409 500 aaKnown RBP7.8□□□□□ -1.16
LDB7YBL006C UBC1P21734 215 aaKnown RBP7.79□□□□□ -1.16
LDB7YBL006C BRE2P43132 505 aa7.79□□□□□ -1.16
LDB7YBL006C DSE4P53753 1117 aa7.79□□□□□ -1.16
LDB7YBL006C CNM67P53865 581 aaKnown RBP7.79□□□□□ -1.16
LDB7YBL006C NAF1P53919 492 aaKnown RBP7.79□□□□□ -1.16
LDB7YBL006C MFM1Q02783 413 aa7.79□□□□□ -1.16
LDB7YBL006C SKY1Q03656 742 aa7.79□□□□□ -1.16
LDB7YBL006C YLR422WQ06409 1932 aa7.78□□□□□ -1.16
LDB7YBL006C PGM1P33401 570 aaKnown RBP7.78□□□□□ -1.16
LDB7YBL006C INP52P50942 1183 aa7.78□□□□□ -1.16
LDB7YBL006C MET13P53128 600 aa7.78□□□□□ -1.16
LDB7YBL006C ARP5P53946 755 aa7.78□□□□□ -1.16
LDB7YBL006C SVF1Q05515 481 aa7.78□□□□□ -1.16
LDB7YBL006C YLR407WQ06070 228 aa7.78□□□□□ -1.16
LDB7YBL006C CDC6P09119 513 aa7.77□□□□□ -1.17
LDB7YBL006C VPS1P21576 704 aaKnown RBP7.77□□□□□ -1.17
LDB7YBL006C EFT1P32324 842 aaKnown RBP7.77□□□□□ -1.17
LDB7YBL006C DRE2P36152 348 aa7.77□□□□□ -1.17
LDB7YBL006C FMP10P40098 244 aa7.77□□□□□ -1.17
LDB7YBL006C OPT1P40897 799 aa7.77□□□□□ -1.17
LDB7YBL006C DIP5P53388 608 aa7.77□□□□□ -1.17
LDB7YBL006C MUK1Q02866 612 aa7.77□□□□□ -1.17
LDB7YBL006C TOR1P35169 2470 aa7.77□□□□□ -1.17
LDB7YBL006C DED1P06634 604 aaKnown RBP7.76□□□□□ -1.17
LDB7YBL006C SPT2P06843 333 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms