RNA–Protein interactions for RNA: ENST00000617219.1

CFHR3-206, Transcript of complement factor H related 3, humanhuman

TSL 5 BASIC

Gene CFHR3, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-206ENST00000617219 HPS1Q92902 700 aa7.58□□□□□ -1.2
CFHR3-206ENST00000617219 ATP9BO43861 1147 aa7.57□□□□□ -1.2
CFHR3-206ENST00000617219 ZIC2O95409 532 aaPredicted RBP7.57□□□□□ -1.2
CFHR3-206ENST00000617219 MYCP01106 439 aaPredicted RBP7.57□□□□□ -1.2
CFHR3-206ENST00000617219 LAMC2Q13753 1193 aa7.57□□□□□ -1.2
CFHR3-206ENST00000617219 PIK3CDO00329 1044 aa7.56□□□□□ -1.2
CFHR3-206ENST00000617219 PROCP04070 461 aa7.56□□□□□ -1.2
CFHR3-206ENST00000617219 USP4Q13107 963 aa7.56□□□□□ -1.2
CFHR3-206ENST00000617219 EML3Q32P44 896 aa7.56□□□□□ -1.2
CFHR3-206ENST00000617219 CCDC85AQ96PX6 553 aaPredicted RBP7.56□□□□□ -1.2
CFHR3-206ENST00000617219 UCN2Q96RP3 112 aa7.56□□□□□ -1.2
CFHR3-206ENST00000617219 PPP1R12CQ9BZL4 782 aa7.56□□□□□ -1.2
CFHR3-206ENST00000617219 SNAPC4Q5SXM2 1469 aa7.56□□□□□ -1.2
CFHR3-206ENST00000617219 PALM3A6NDB9 673 aaPredicted RBP7.55□□□□□ -1.2
CFHR3-206ENST00000617219 CAPN5O15484 640 aaPredicted RBP7.55□□□□□ -1.2
CFHR3-206ENST00000617219 OXLD1Q5BKU9 147 aa7.55□□□□□ -1.2
CFHR3-206ENST00000617219 CC2D2BQ6DHV5 1058 aa7.55□□□□□ -1.2
CFHR3-206ENST00000617219 TBC1D9Q6ZT07 1266 aa7.55□□□□□ -1.2
CFHR3-206ENST00000617219 TMPRSS4Q9NRS4 437 aa7.55□□□□□ -1.2
CFHR3-206ENST00000617219 TFIP11Q9UBB9 837 aaKnown RBP7.55□□□□□ -1.2
CFHR3-206ENST00000617219 CHIC2Q9UKJ5 165 aa7.55□□□□□ -1.2
CFHR3-206ENST00000617219 CHD1O14646 1710 aa7.55□□□□□ -1.2
CFHR3-206ENST00000617219 SYNJ1O43426 1573 aa7.55□□□□□ -1.2
CFHR3-206ENST00000617219 WDR97A6NE52 1622 aa7.55□□□□□ -1.2
CFHR3-206ENST00000617219 USP17L5A8MUK1 530 aa7.55□□□□□ -1.2
CFHR3-206ENST00000617219 TIMP2P16035 220 aa7.55□□□□□ -1.2
CFHR3-206ENST00000617219 CCDC82Q8N4S0 544 aa7.55□□□□□ -1.2
CFHR3-206ENST00000617219 ZNF784Q8NCA9 323 aaPredicted RBP7.55□□□□□ -1.2
CFHR3-206ENST00000617219 GALNT6Q8NCL4 622 aa7.55□□□□□ -1.2
CFHR3-206ENST00000617219 ITPKCQ96DU7 683 aa7.55□□□□□ -1.2
CFHR3-206ENST00000617219 CYLDQ9NQC7 956 aa7.55□□□□□ -1.2
CFHR3-206ENST00000617219 WRNQ14191 1432 aaPredicted RBP eCLIP7.54□□□□□ -1.2
CFHR3-206ENST00000617219 PLEKHM2Q8IWE5 1019 aa7.54□□□□□ -1.2
CFHR3-206ENST00000617219 NOD1Q9Y239 953 aa7.54□□□□□ -1.2
CFHR3-206ENST00000617219 GRIN2BQ13224 1484 aa7.53□□□□□ -1.2
CFHR3-206ENST00000617219 USP17L3A6NCW0 530 aa7.53□□□□□ -1.2
CFHR3-206ENST00000617219 USP17L4A6NCW7 530 aa7.53□□□□□ -1.2
CFHR3-206ENST00000617219 LMOD1P29536 600 aaPredicted RBP7.53□□□□□ -1.2
CFHR3-206ENST00000617219 ERVK-9P63128 1117 aa7.53□□□□□ -1.2
CFHR3-206ENST00000617219 USP17L2Q6R6M4 530 aa7.53□□□□□ -1.2
CFHR3-206ENST00000617219 USP17L1Q7RTZ2 530 aa7.53□□□□□ -1.2
CFHR3-206ENST00000617219 KLF16Q9BXK1 252 aaPredicted RBP7.53□□□□□ -1.2
CFHR3-206ENST00000617219 ZFAND3Q9H8U3 227 aa7.53□□□□□ -1.2
CFHR3-206ENST00000617219 MAFBQ9Y5Q3 323 aaPredicted RBP7.53□□□□□ -1.2
CFHR3-206ENST00000617219 RIMBP3CA6NJZ7 1639 aa7.53□□□□□ -1.2
CFHR3-206ENST00000617219 RIMBP3BA6NNM3 1639 aa7.53□□□□□ -1.2
CFHR3-206ENST00000617219 RIMBP3Q9UFD9 1639 aa7.53□□□□□ -1.2
CFHR3-206ENST00000617219 ARHGEF11O15085 1522 aa7.52□□□□□ -1.21
CFHR3-206ENST00000617219 ABCA10Q8WWZ4 1543 aa7.52□□□□□ -1.21
CFHR3-206ENST00000617219 TOP2BQ02880 1626 aa7.52□□□□□ -1.21
CFHR3-206ENST00000617219 UPP2O95045 317 aa7.52□□□□□ -1.21
CFHR3-206ENST00000617219 NCOA4Q13772 614 aa7.52□□□□□ -1.21
CFHR3-206ENST00000617219 TSGA10IPQ3SY00 556 aa7.52□□□□□ -1.21
CFHR3-206ENST00000617219 CYP2U1Q7Z449 544 aa7.52□□□□□ -1.21
CFHR3-206ENST00000617219 TRIM50Q86XT4 487 aa7.52□□□□□ -1.21
CFHR3-206ENST00000617219 CDCA7Q9BWT1 371 aaPredicted RBP7.52□□□□□ -1.21
CFHR3-206ENST00000617219 C1orf115Q9H7X2 142 aa7.52□□□□□ -1.21
CFHR3-206ENST00000617219 GAPVD1Q14C86 1478 aa7.52□□□□□ -1.21
CFHR3-206ENST00000617219 ABCA5Q8WWZ7 1642 aa7.51□□□□□ -1.21
CFHR3-206ENST00000617219 LILRA1O75019 489 aa7.51□□□□□ -1.21
CFHR3-206ENST00000617219 SLURP2P0DP57 97 aa7.51□□□□□ -1.21
CFHR3-206ENST00000617219 DEPDC4Q8N2C3 294 aa7.51□□□□□ -1.21
CFHR3-206ENST00000617219 MAGI1Q96QZ7 1491 aaPredicted RBP7.51□□□□□ -1.21
CFHR3-206ENST00000617219 BIVM-ERCC5R4GMW8 1640 aa7.51□□□□□ -1.21
CFHR3-206ENST00000617219 PBRM1Q86U86 1689 aa7.51□□□□□ -1.21
CFHR3-206ENST00000617219 ATP5J2-PTCD1G3V325 749 aa7.5□□□□□ -1.21
CFHR3-206ENST00000617219 Q6ZVU0 165 aa7.5□□□□□ -1.21
CFHR3-206ENST00000617219 ARID3AQ99856 593 aa7.5□□□□□ -1.21
CFHR3-206ENST00000617219 SYNJ2O15056 1496 aa7.49□□□□□ -1.21
CFHR3-206ENST00000617219 ADH1AP07327 375 aa7.49□□□□□ -1.21
CFHR3-206ENST00000617219 RFX1P22670 979 aa7.49□□□□□ -1.21
CFHR3-206ENST00000617219 SCTRP47872 440 aa7.49□□□□□ -1.21
CFHR3-206ENST00000617219 ATP1A2P50993 1020 aa7.49□□□□□ -1.21
CFHR3-206ENST00000617219 CBLBQ13191 982 aa7.49□□□□□ -1.21
CFHR3-206ENST00000617219 CFAP70Q5T0N1 1121 aa7.49□□□□□ -1.21
CFHR3-206ENST00000617219 MEIOBQ8N635 442 aa7.49□□□□□ -1.21
CFHR3-206ENST00000617219 CHMP7Q8WUX9 453 aaPredicted RBP7.49□□□□□ -1.21
CFHR3-206ENST00000617219 TSEN34Q9BSV6 310 aaKnown RBP7.49□□□□□ -1.21
CFHR3-206ENST00000617219 VRTNQ9H8Y1 702 aa7.49□□□□□ -1.21
CFHR3-206ENST00000617219 MKRN1Q9UHC7 482 aaKnown RBP7.49□□□□□ -1.21
CFHR3-206ENST00000617219 ITGB2P05107 769 aa7.49□□□□□ -1.21
CFHR3-206ENST00000617219 SCARF1Q14162 830 aa7.49□□□□□ -1.21
CFHR3-206ENST00000617219 RBM19Q9Y4C8 960 aaKnown RBP7.49□□□□□ -1.21
CFHR3-206ENST00000617219 ARID1BQ8NFD5 2236 aaPredicted RBP7.48□□□□□ -1.21
CFHR3-206ENST00000617219 CLASP1Q7Z460 1538 aa7.48□□□□□ -1.21
CFHR3-206ENST00000617219 ADD1P35611 737 aaKnown RBP7.48□□□□□ -1.21
CFHR3-206ENST00000617219 PSME1Q06323 249 aa7.48□□□□□ -1.21
CFHR3-206ENST00000617219 OSBPL3Q9H4L5 887 aa7.48□□□□□ -1.21
CFHR3-206ENST00000617219 GNRH1P01148 92 aa7.47□□□□□ -1.21
CFHR3-206ENST00000617219 GTF2IP78347 998 aa7.47□□□□□ -1.21
CFHR3-206ENST00000617219 RELBQ01201 579 aa7.47□□□□□ -1.21
CFHR3-206ENST00000617219 ESCO1Q5FWF5 840 aa7.47□□□□□ -1.21
CFHR3-206ENST00000617219 MRPL14Q6P1L8 145 aaKnown RBP7.47□□□□□ -1.21
CFHR3-206ENST00000617219 LARP1Q6PKG0 1096 aaKnown RBP7.47□□□□□ -1.21
CFHR3-206ENST00000617219 LINC00528Q8N1L1 170 aa7.47□□□□□ -1.21
CFHR3-206ENST00000617219 SCARF2Q96GP6 870 aaPredicted RBP7.47□□□□□ -1.21
CFHR3-206ENST00000617219 ARAP1Q96P48 1450 aa7.46□□□□□ -1.21
CFHR3-206ENST00000617219 BMP2P12643 396 aa7.46□□□□□ -1.22
CFHR3-206ENST00000617219 PTGIRP43119 386 aa7.46□□□□□ -1.22
CFHR3-206ENST00000617219 ADAMTS12P58397 1594 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms