RNA–Protein interactions for RNA: ENSMUST00000219577.1

Herc4-208, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Herc4, Length 3,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-208ENSMUST00000219577 Hoxb7P09024 217 aa14.63□□□□□ -0.07
Herc4-208ENSMUST00000219577 Gripap1Q8VD04 806 aa14.63□□□□□ -0.07
Herc4-208ENSMUST00000219577 Chmp3Q9CQ10 224 aa14.63□□□□□ -0.07
Herc4-208ENSMUST00000219577 Mlh1Q9JK91 760 aa14.63□□□□□ -0.07
Herc4-208ENSMUST00000219577 Synj2Q9D2G5 1434 aa14.63□□□□□ -0.07
Herc4-208ENSMUST00000219577 Gpatch11Q3UFS4 262 aa14.62□□□□□ -0.07
Herc4-208ENSMUST00000219577 EspnlQ3UYR4 1005 aa14.62□□□□□ -0.07
Herc4-208ENSMUST00000219577 Gsdma3Q5Y4Y6 464 aa14.62□□□□□ -0.07
Herc4-208ENSMUST00000219577 Il1rapl2Q9ERS6 686 aa14.62□□□□□ -0.07
Herc4-208ENSMUST00000219577 Ddx17Q501J6 650 aaKnown RBP14.62□□□□□ -0.07
Herc4-208ENSMUST00000219577 Cdc42bpgQ80UW5 1551 aa14.62□□□□□ -0.07
Herc4-208ENSMUST00000219577 Atp8b2P98199 1209 aa14.61□□□□□ -0.07
Herc4-208ENSMUST00000219577 Aldh1l2Q8K009 923 aa14.61□□□□□ -0.07
Herc4-208ENSMUST00000219577 Uhrf1bp1B2KF50 1429 aa14.61□□□□□ -0.07
Herc4-208ENSMUST00000219577 Ubap1lG3UW59 384 aa14.61□□□□□ -0.07
Herc4-208ENSMUST00000219577 Cnnm1Q0GA42 951 aa14.61□□□□□ -0.07
Herc4-208ENSMUST00000219577 Map3k2Q61083 619 aa14.61□□□□□ -0.07
Herc4-208ENSMUST00000219577 4933402E13RikQ9D4D2 429 aa14.61□□□□□ -0.07
Herc4-208ENSMUST00000219577 IbspQ61711 324 aa14.61□□□□□ -0.07
Herc4-208ENSMUST00000219577 Rrp12Q6P5B0 1295 aaKnown RBP14.61□□□□□ -0.07
Herc4-208ENSMUST00000219577 Tmx3Q8BXZ1 456 aa14.61□□□□□ -0.07
Herc4-208ENSMUST00000219577 Mmp8O70138 465 aa14.6□□□□□ -0.07
Herc4-208ENSMUST00000219577 Kdm4cQ8VCD7 1054 aa14.6□□□□□ -0.07
Herc4-208ENSMUST00000219577 Hspa2P17156 633 aa14.6□□□□□ -0.07
Herc4-208ENSMUST00000219577 Nol8Q3UHX0 1147 aaKnown RBP14.6□□□□□ -0.07
Herc4-208ENSMUST00000219577 Smc3Q9CW03 1217 aaKnown RBP14.6□□□□□ -0.07
Herc4-208ENSMUST00000219577 Gjb2Q00977 226 aa14.6□□□□□ -0.07
Herc4-208ENSMUST00000219577 EngaseQ8BX80 734 aa14.6□□□□□ -0.07
Herc4-208ENSMUST00000219577 Iffo2Q8R2V2 512 aa14.6□□□□□ -0.07
Herc4-208ENSMUST00000219577 4931400O07RikQ9D4M5 137 aa14.6□□□□□ -0.07
Herc4-208ENSMUST00000219577 Utp3Q9JI13 469 aaKnown RBP14.6□□□□□ -0.07
Herc4-208ENSMUST00000219577 Qser1A2BIE1 1698 aa14.59□□□□□ -0.07
Herc4-208ENSMUST00000219577 Bach1P97302 739 aa14.59□□□□□ -0.07
Herc4-208ENSMUST00000219577 Kif4P33174 1231 aa14.59□□□□□ -0.07
Herc4-208ENSMUST00000219577 Samm50Q8BGH2 469 aa14.59□□□□□ -0.07
Herc4-208ENSMUST00000219577 KinQ8K339 391 aa14.59□□□□□ -0.07
Herc4-208ENSMUST00000219577 Chmp7Q8R1T1 451 aa14.59□□□□□ -0.07
Herc4-208ENSMUST00000219577 Mcm3P25206 812 aaKnown RBP14.58□□□□□ -0.08
Herc4-208ENSMUST00000219577 Atp6v1dP57746 247 aa14.58□□□□□ -0.08
Herc4-208ENSMUST00000219577 Slc39a6Q8C145 765 aa14.58□□□□□ -0.08
Herc4-208ENSMUST00000219577 Ttc37F8VPK0 1563 aa14.58□□□□□ -0.08
Herc4-208ENSMUST00000219577 Mcmdc2E9Q956 681 aa14.58□□□□□ -0.08
Herc4-208ENSMUST00000219577 Ets1P27577 440 aa14.58□□□□□ -0.08
Herc4-208ENSMUST00000219577 Atp7bQ64446 1462 aa14.58□□□□□ -0.08
Herc4-208ENSMUST00000219577 Astn2Q80Z10 1352 aa14.58□□□□□ -0.08
Herc4-208ENSMUST00000219577 Disp3A3KFU9 1347 aa14.58□□□□□ -0.08
Herc4-208ENSMUST00000219577 Ier5O89113 308 aa14.58□□□□□ -0.08
Herc4-208ENSMUST00000219577 Slc26a8Q8R0C3 999 aa14.58□□□□□ -0.08
Herc4-208ENSMUST00000219577 Pes1Q9EQ61 584 aaKnown RBP14.58□□□□□ -0.08
Herc4-208ENSMUST00000219577 Samd1D3YXK1 519 aa14.57□□□□□ -0.08
Herc4-208ENSMUST00000219577 Pip4k2bQ80XI4 416 aa14.57□□□□□ -0.08
Herc4-208ENSMUST00000219577 Pmfbp1Q9WVQ0 1022 aa14.57□□□□□ -0.08
Herc4-208ENSMUST00000219577 Gm9992B2RWK3 458 aa14.57□□□□□ -0.08
Herc4-208ENSMUST00000219577 Unc93aQ710D3 458 aa14.57□□□□□ -0.08
Herc4-208ENSMUST00000219577 Olfml1Q8BSH2 233 aa14.57□□□□□ -0.08
Herc4-208ENSMUST00000219577 AnlnQ8K298 1121 aaKnown RBP14.57□□□□□ -0.08
Herc4-208ENSMUST00000219577 Ino80Q6ZPV2 1559 aa14.57□□□□□ -0.08
Herc4-208ENSMUST00000219577 Q8C5K5 320 aa14.56□□□□□ -0.08
Herc4-208ENSMUST00000219577 Top1mtQ8R4U6 593 aa14.56□□□□□ -0.08
Herc4-208ENSMUST00000219577 Plekhg1F6S200 1446 aa14.56□□□□□ -0.08
Herc4-208ENSMUST00000219577 Ercc3P49135 783 aa14.56□□□□□ -0.08
Herc4-208ENSMUST00000219577 Fmnl2A2APV2 1086 aa14.56□□□□□ -0.08
Herc4-208ENSMUST00000219577 Smarce1O54941 411 aaKnown RBP14.56□□□□□ -0.08
Herc4-208ENSMUST00000219577 Tgfb1i1Q62219 461 aa14.56□□□□□ -0.08
Herc4-208ENSMUST00000219577 Pank2Q3U4S0 443 aa14.55□□□□□ -0.08
Herc4-208ENSMUST00000219577 BcanQ61361 883 aa14.55□□□□□ -0.08
Herc4-208ENSMUST00000219577 Pdzrn3Q69ZS0 1063 aa14.55□□□□□ -0.08
Herc4-208ENSMUST00000219577 Bms1Q6PGF5 1284 aaKnown RBP14.55□□□□□ -0.08
Herc4-208ENSMUST00000219577 AdgbG3UZ78 1657 aa14.55□□□□□ -0.08
Herc4-208ENSMUST00000219577 Gm21698A0A087WQP8 267 aa14.55□□□□□ -0.08
Herc4-208ENSMUST00000219577 Gm21671G3UY31 267 aa14.55□□□□□ -0.08
Herc4-208ENSMUST00000219577 Ints3Q7TPD0 1041 aaKnown RBP14.55□□□□□ -0.08
Herc4-208ENSMUST00000219577 PtmsQ9D0J8 101 aaKnown RBP14.55□□□□□ -0.08
Herc4-208ENSMUST00000219577 AglF8VPN4 1532 aa14.55□□□□□ -0.08
Herc4-208ENSMUST00000219577 Abca14E9Q8F8 1683 aa14.54□□□□□ -0.08
Herc4-208ENSMUST00000219577 Zdhhc9P59268 364 aa14.54□□□□□ -0.08
Herc4-208ENSMUST00000219577 Foxp4Q9DBY0 795 aaKnown RBP14.54□□□□□ -0.08
Herc4-208ENSMUST00000219577 Nol11Q8BJW5 723 aaKnown RBP14.54□□□□□ -0.08
Herc4-208ENSMUST00000219577 Tsr2Q8C8T8 191 aa14.54□□□□□ -0.08
Herc4-208ENSMUST00000219577 Lmbr1lQ9D1E5 489 aa14.54□□□□□ -0.08
Herc4-208ENSMUST00000219577 CltcQ68FD5 1675 aaKnown RBP14.53□□□□□ -0.08
Herc4-208ENSMUST00000219577 VgfQ0VGU4 617 aa14.53□□□□□ -0.08
Herc4-208ENSMUST00000219577 Ddrgk1Q80WW9 315 aa14.53□□□□□ -0.08
Herc4-208ENSMUST00000219577 4930504O13RikQ8C5Z9 145 aa14.53□□□□□ -0.08
Herc4-208ENSMUST00000219577 Sf3a1Q8K4Z5 791 aaKnown RBP14.53□□□□□ -0.08
Herc4-208ENSMUST00000219577 Q9D9S1 216 aa14.53□□□□□ -0.08
Herc4-208ENSMUST00000219577 LratQ9JI60 231 aa14.53□□□□□ -0.08
Herc4-208ENSMUST00000219577 Cyp2d11P24457 504 aa14.53□□□□□ -0.08
Herc4-208ENSMUST00000219577 Mum1Q6DID5 682 aa14.53□□□□□ -0.08
Herc4-208ENSMUST00000219577 Cnnm3Q32NY4 713 aa14.53□□□□□ -0.08
Herc4-208ENSMUST00000219577 LlphQ9D945 130 aaKnown RBP14.53□□□□□ -0.08
Herc4-208ENSMUST00000219577 Pdia4P08003 638 aaKnown RBP14.52□□□□□ -0.08
Herc4-208ENSMUST00000219577 Clstn1Q9EPL2 979 aa14.52□□□□□ -0.08
Herc4-208ENSMUST00000219577 GckrQ91X44 587 aa14.52□□□□□ -0.08
Herc4-208ENSMUST00000219577 Chd1lQ9CXF7 900 aa14.52□□□□□ -0.08
Herc4-208ENSMUST00000219577 Elp1Q7TT37 1333 aaKnown RBP14.52□□□□□ -0.09
Herc4-208ENSMUST00000219577 PtpruB1AUH1 1446 aa14.52□□□□□ -0.09
Herc4-208ENSMUST00000219577 Ltv1Q6NSQ7 470 aaKnown RBP14.52□□□□□ -0.09
Herc4-208ENSMUST00000219577 Unc5clQ6R653 518 aa14.52□□□□□ -0.09
Herc4-208ENSMUST00000219577 PzpQ61838 1495 aa14.51□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms