RNA–Protein interactions for RNA: ENSMUST00000119896.1

Ssr3-202, Transcript of Translocon-associated protein subunit gamma, mousemouse

TSL 1 (best) BASIC

Gene Ssr3, Length 1,469 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-202ENSMUST00000119896 1810065E05RikQ5NC41 235 aa12.53□□□□□ -0.4
Ssr3-202ENSMUST00000119896 Aox2Q5SGK3 1345 aa12.53□□□□□ -0.4
Ssr3-202ENSMUST00000119896 Trpm3Q5F4S9 1721 aa12.52□□□□□ -0.4
Ssr3-202ENSMUST00000119896 Ric1Q69ZJ7 1422 aa12.52□□□□□ -0.4
Ssr3-202ENSMUST00000119896 Cald1E9QA15 768 aaKnown RBP12.52□□□□□ -0.41
Ssr3-202ENSMUST00000119896 Slc12a5Q91V14 1138 aa12.52□□□□□ -0.41
Ssr3-202ENSMUST00000119896 HypkQ9CR41 129 aa12.52□□□□□ -0.41
Ssr3-202ENSMUST00000119896 Amotl1Q9D4H4 968 aa12.52□□□□□ -0.41
Ssr3-202ENSMUST00000119896 Cfap70D3YVL2 1141 aa12.51□□□□□ -0.41
Ssr3-202ENSMUST00000119896 Smg7Q5RJH6 1138 aaKnown RBP12.51□□□□□ -0.41
Ssr3-202ENSMUST00000119896 Akap2O54931 893 aa12.5□□□□□ -0.41
Ssr3-202ENSMUST00000119896 Nkx2-3P97334 362 aa12.5□□□□□ -0.41
Ssr3-202ENSMUST00000119896 TrhQ62361 256 aa12.5□□□□□ -0.41
Ssr3-202ENSMUST00000119896 Amhr2Q8K592 568 aa12.5□□□□□ -0.41
Ssr3-202ENSMUST00000119896 Lrrc43Q3V0L5 667 aa12.49□□□□□ -0.41
Ssr3-202ENSMUST00000119896 Zdbf2Q5SS00 2493 aaKnown RBP12.49□□□□□ -0.41
Ssr3-202ENSMUST00000119896 C4bP01029 1738 aa12.48□□□□□ -0.41
Ssr3-202ENSMUST00000119896 Megf6Q80V70 1572 aa12.48□□□□□ -0.41
Ssr3-202ENSMUST00000119896 Zfp777B9EKF4 885 aa12.48□□□□□ -0.41
Ssr3-202ENSMUST00000119896 Cyp2c68K7N6C2 491 aa12.48□□□□□ -0.41
Ssr3-202ENSMUST00000119896 Ccdc155Q80VJ8 648 aa12.48□□□□□ -0.41
Ssr3-202ENSMUST00000119896 Socs7Q8VHQ2 579 aa12.48□□□□□ -0.41
Ssr3-202ENSMUST00000119896 Zfyve9A2A8R0 1397 aa12.48□□□□□ -0.41
Ssr3-202ENSMUST00000119896 Mcm10Q0VBD2 885 aa12.47□□□□□ -0.41
Ssr3-202ENSMUST00000119896 Slfnl1Q8BHW9 410 aa12.47□□□□□ -0.41
Ssr3-202ENSMUST00000119896 TnikP83510 1323 aa12.47□□□□□ -0.41
Ssr3-202ENSMUST00000119896 ClspnQ80YR7 1315 aa12.47□□□□□ -0.41
Ssr3-202ENSMUST00000119896 Togaram1Q6A070 1776 aaKnown RBP12.47□□□□□ -0.41
Ssr3-202ENSMUST00000119896 Nedd4P46935 887 aaKnown RBP12.46□□□□□ -0.41
Ssr3-202ENSMUST00000119896 NogP97466 232 aa12.46□□□□□ -0.41
Ssr3-202ENSMUST00000119896 HmcesQ8R1M0 353 aaKnown RBP12.46□□□□□ -0.41
Ssr3-202ENSMUST00000119896 AceP09470 1312 aa12.46□□□□□ -0.41
Ssr3-202ENSMUST00000119896 B4galnt4Q766D5 1034 aa12.46□□□□□ -0.42
Ssr3-202ENSMUST00000119896 Srp68Q8BMA6 625 aaKnown RBP12.46□□□□□ -0.42
Ssr3-202ENSMUST00000119896 Pde3aQ9Z0X4 1141 aa12.45□□□□□ -0.42
Ssr3-202ENSMUST00000119896 Slurp2P0DP59 97 aa12.44□□□□□ -0.42
Ssr3-202ENSMUST00000119896 Wdhd1P59328 1117 aa12.44□□□□□ -0.42
Ssr3-202ENSMUST00000119896 Pde4dQ01063 747 aa12.44□□□□□ -0.42
Ssr3-202ENSMUST00000119896 DiexfQ8BTT6 772 aaKnown RBP12.44□□□□□ -0.42
Ssr3-202ENSMUST00000119896 IarsQ8BU30 1262 aa12.44□□□□□ -0.42
Ssr3-202ENSMUST00000119896 P2rx7Q9Z1M0 595 aa12.44□□□□□ -0.42
Ssr3-202ENSMUST00000119896 Atp1b3P97370 278 aa12.43□□□□□ -0.42
Ssr3-202ENSMUST00000119896 EgfrQ01279 1210 aa12.43□□□□□ -0.42
Ssr3-202ENSMUST00000119896 Gtpbp6Q3U6U5 514 aa12.43□□□□□ -0.42
Ssr3-202ENSMUST00000119896 Clcn1Q64347 994 aa12.43□□□□□ -0.42
Ssr3-202ENSMUST00000119896 Efcab2Q9CQ46 164 aa12.43□□□□□ -0.42
Ssr3-202ENSMUST00000119896 PalmQ9Z0P4 383 aa12.43□□□□□ -0.42
Ssr3-202ENSMUST00000119896 Spef2Q8C9J3 1734 aa12.43□□□□□ -0.42
Ssr3-202ENSMUST00000119896 Klrk1O54709 232 aa12.42□□□□□ -0.42
Ssr3-202ENSMUST00000119896 Syde2E9PUP1 1314 aa12.42□□□□□ -0.42
Ssr3-202ENSMUST00000119896 Kndc1Q0KK55 1742 aa12.41□□□□□ -0.42
Ssr3-202ENSMUST00000119896 Snap23O09044 210 aa12.41□□□□□ -0.42
Ssr3-202ENSMUST00000119896 Rab11fip3Q8CHD8 1047 aa12.41□□□□□ -0.42
Ssr3-202ENSMUST00000119896 Klhdc4Q921I2 584 aa12.41□□□□□ -0.42
Ssr3-202ENSMUST00000119896 Tktl2Q9D4D4 627 aa12.41□□□□□ -0.42
Ssr3-202ENSMUST00000119896 StrcQ8VIM6 1809 aa12.41□□□□□ -0.42
Ssr3-202ENSMUST00000119896 Adcy9P51830 1353 aa12.41□□□□□ -0.42
Ssr3-202ENSMUST00000119896 Ubr2Q6WKZ8 1755 aa12.41□□□□□ -0.42
Ssr3-202ENSMUST00000119896 Lmnb1P14733 588 aaKnown RBP12.4□□□□□ -0.43
Ssr3-202ENSMUST00000119896 Plekhg5Q66T02 1073 aa12.4□□□□□ -0.43
Ssr3-202ENSMUST00000119896 Rbm26Q6NZN0 1012 aaKnown RBP12.4□□□□□ -0.43
Ssr3-202ENSMUST00000119896 Zbtb1Q91VL9 713 aa12.4□□□□□ -0.43
Ssr3-202ENSMUST00000119896 Trip6Q9Z1Y4 480 aa12.4□□□□□ -0.43
Ssr3-202ENSMUST00000119896 Tango6Q8C3S2 1079 aa12.39□□□□□ -0.43
Ssr3-202ENSMUST00000119896 Ubn2Q80WC1 1314 aa12.39□□□□□ -0.43
Ssr3-202ENSMUST00000119896 TmpoQ61033 693 aaKnown RBP12.38□□□□□ -0.43
Ssr3-202ENSMUST00000119896 Q8C6G1 249 aa12.38□□□□□ -0.43
Ssr3-202ENSMUST00000119896 Stk31Q99MW1 1018 aa12.38□□□□□ -0.43
Ssr3-202ENSMUST00000119896 Upf1Q9EPU0 1124 aaKnown RBP12.38□□□□□ -0.43
Ssr3-202ENSMUST00000119896 Pik3ap1Q9EQ32 811 aa12.38□□□□□ -0.43
Ssr3-202ENSMUST00000119896 Mex3cQ05A36 652 aaKnown RBP12.37□□□□□ -0.43
Ssr3-202ENSMUST00000119896 Ciapin1Q8WTY4 309 aa12.37□□□□□ -0.43
Ssr3-202ENSMUST00000119896 Nsfl1cQ9CZ44 370 aaKnown RBP12.37□□□□□ -0.43
Ssr3-202ENSMUST00000119896 PigbQ9JJQ0 542 aa12.37□□□□□ -0.43
Ssr3-202ENSMUST00000119896 Tiam2Q6ZPF3 1715 aa12.36□□□□□ -0.43
Ssr3-202ENSMUST00000119896 Frmpd3A0A140LIW3 1774 aa12.36□□□□□ -0.43
Ssr3-202ENSMUST00000119896 Nav1Q8CH77 1875 aa12.36□□□□□ -0.43
Ssr3-202ENSMUST00000119896 Nip7Q9CXK8 180 aaKnown RBP12.36□□□□□ -0.43
Ssr3-202ENSMUST00000119896 Strn4P58404 760 aa12.35□□□□□ -0.43
Ssr3-202ENSMUST00000119896 Stxbp5lQ5DQR4 1185 aa12.35□□□□□ -0.43
Ssr3-202ENSMUST00000119896 VwdeQ6DFV8 926 aa12.35□□□□□ -0.43
Ssr3-202ENSMUST00000119896 PrimpolQ6P1E7 537 aa12.35□□□□□ -0.43
Ssr3-202ENSMUST00000119896 MetP16056 1379 aa12.35□□□□□ -0.43
Ssr3-202ENSMUST00000119896 Prdm11A2AGX3 565 aa12.34□□□□□ -0.43
Ssr3-202ENSMUST00000119896 PgfP49764 158 aa12.34□□□□□ -0.43
Ssr3-202ENSMUST00000119896 Gjd4Q8BSD4 364 aa12.34□□□□□ -0.43
Ssr3-202ENSMUST00000119896 Podxl2Q8CAE9 603 aa12.34□□□□□ -0.43
Ssr3-202ENSMUST00000119896 Dpf1Q9QX66 387 aa12.34□□□□□ -0.43
Ssr3-202ENSMUST00000119896 UtrnE9Q6R7 3430 aa12.34□□□□□ -0.43
Ssr3-202ENSMUST00000119896 Abcc12Q80WJ6 1366 aa12.34□□□□□ -0.43
Ssr3-202ENSMUST00000119896 Gja5Q01231 358 aa12.34□□□□□ -0.43
Ssr3-202ENSMUST00000119896 Cabp2Q9JLK4 216 aa12.34□□□□□ -0.43
Ssr3-202ENSMUST00000119896 XpcP51612 930 aa12.33□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Gja3Q64448 417 aa12.33□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Tsen2Q6P7W5 460 aa12.33□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Mylk2Q8VCR8 613 aa12.33□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Ambra1A2AH22 1300 aa12.32□□□□□ -0.44
Ssr3-202ENSMUST00000119896 D830030K20RikE9PYQ5 218 aa12.32□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Gm3043K7N693 218 aa12.32□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Gm16440K7N6G6 218 aa12.32□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 348 ms