RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Ap3b2Q9JME5 1082 aa14.02□□□□□ -0.16
Vps54-202ENSMUST00000109578 Atp8b2P98199 1209 aa14.02□□□□□ -0.17
Vps54-202ENSMUST00000109578 Mum1Q6DID5 682 aa14.02□□□□□ -0.17
Vps54-202ENSMUST00000109578 Nol12Q8BG17 217 aa14.02□□□□□ -0.17
Vps54-202ENSMUST00000109578 Rnf214Q8BFU3 668 aaKnown RBP14.01□□□□□ -0.17
Vps54-202ENSMUST00000109578 Msh6P54276 1358 aaKnown RBP14.01□□□□□ -0.17
Vps54-202ENSMUST00000109578 EvcP57680 1005 aa14.01□□□□□ -0.17
Vps54-202ENSMUST00000109578 Jakmip1Q8BVL9 626 aa14.01□□□□□ -0.17
Vps54-202ENSMUST00000109578 CemipQ8BI06 1361 aa14.01□□□□□ -0.17
Vps54-202ENSMUST00000109578 Sirt1Q923E4 737 aa14.01□□□□□ -0.17
Vps54-202ENSMUST00000109578 Cyp2d11P24457 504 aa14□□□□□ -0.17
Vps54-202ENSMUST00000109578 Disp3A3KFU9 1347 aa14□□□□□ -0.17
Vps54-202ENSMUST00000109578 Rtn4Q99P72 1162 aaKnown RBP14□□□□□ -0.17
Vps54-202ENSMUST00000109578 Cdk12Q14AX6 1484 aaKnown RBP14□□□□□ -0.17
Vps54-202ENSMUST00000109578 Camta1A2A891 1682 aa13.99□□□□□ -0.17
Vps54-202ENSMUST00000109578 Filip1lQ6P6L0 1131 aa13.99□□□□□ -0.17
Vps54-202ENSMUST00000109578 Znf335A2A5K6 1337 aa13.99□□□□□ -0.17
Vps54-202ENSMUST00000109578 Safb2Q80YR5 991 aaKnown RBP13.99□□□□□ -0.17
Vps54-202ENSMUST00000109578 Slc35g1Q8BY79 368 aa13.99□□□□□ -0.17
Vps54-202ENSMUST00000109578 Nol11Q8BJW5 723 aaKnown RBP13.98□□□□□ -0.17
Vps54-202ENSMUST00000109578 LlphQ9D945 130 aaKnown RBP13.98□□□□□ -0.17
Vps54-202ENSMUST00000109578 Gm45015A0A140LII9 184 aa13.98□□□□□ -0.17
Vps54-202ENSMUST00000109578 Gm18336A0A140LIU8 765 aa13.98□□□□□ -0.17
Vps54-202ENSMUST00000109578 Mcmdc2E9Q956 681 aa13.98□□□□□ -0.17
Vps54-202ENSMUST00000109578 Gm10563F6WIE4 79 aa13.98□□□□□ -0.17
Vps54-202ENSMUST00000109578 Hoxc9P09633 260 aa13.98□□□□□ -0.17
Vps54-202ENSMUST00000109578 Stk3Q9JI10 497 aa13.98□□□□□ -0.17
Vps54-202ENSMUST00000109578 Pmfbp1Q9WVQ0 1022 aa13.98□□□□□ -0.17
Vps54-202ENSMUST00000109578 Frmpd2A0A140LI67 1392 aa13.98□□□□□ -0.17
Vps54-202ENSMUST00000109578 Tlr7P58681 1050 aa13.97□□□□□ -0.17
Vps54-202ENSMUST00000109578 Slc4a10Q5DTL9 1118 aa13.97□□□□□ -0.17
Vps54-202ENSMUST00000109578 HypkQ9CR41 129 aa13.97□□□□□ -0.17
Vps54-202ENSMUST00000109578 Igsf1Q7TQA1 1317 aa13.97□□□□□ -0.17
Vps54-202ENSMUST00000109578 Nol8Q3UHX0 1147 aaKnown RBP13.97□□□□□ -0.17
Vps54-202ENSMUST00000109578 Ddrgk1Q80WW9 315 aa13.97□□□□□ -0.17
Vps54-202ENSMUST00000109578 MccE9PWI3 1003 aa13.96□□□□□ -0.17
Vps54-202ENSMUST00000109578 Atf5O70191 283 aa13.96□□□□□ -0.17
Vps54-202ENSMUST00000109578 Unc5clQ6R653 518 aa13.96□□□□□ -0.17
Vps54-202ENSMUST00000109578 Slx4ipQ9D7Y9 413 aa13.96□□□□□ -0.17
Vps54-202ENSMUST00000109578 Map3k13Q1HKZ5 959 aa13.96□□□□□ -0.17
Vps54-202ENSMUST00000109578 Pank2Q3U4S0 443 aa13.96□□□□□ -0.17
Vps54-202ENSMUST00000109578 Mlh1Q9JK91 760 aa13.96□□□□□ -0.17
Vps54-202ENSMUST00000109578 Slit3Q9WVB4 1523 aa13.96□□□□□ -0.17
Vps54-202ENSMUST00000109578 Pik3c2aQ61194 1686 aa13.96□□□□□ -0.18
Vps54-202ENSMUST00000109578 Map2P20357 1828 aa13.96□□□□□ -0.18
Vps54-202ENSMUST00000109578 AnlnQ8K298 1121 aaKnown RBP13.95□□□□□ -0.18
Vps54-202ENSMUST00000109578 Zap70P43404 618 aa13.95□□□□□ -0.18
Vps54-202ENSMUST00000109578 Amotl2Q8K371 772 aa13.95□□□□□ -0.18
Vps54-202ENSMUST00000109578 Pdzrn3Q69ZS0 1063 aa13.95□□□□□ -0.18
Vps54-202ENSMUST00000109578 Sytl4Q9R0Q1 673 aa13.95□□□□□ -0.18
Vps54-202ENSMUST00000109578 N4bp2F8VQG7 1678 aaKnown RBP13.95□□□□□ -0.18
Vps54-202ENSMUST00000109578 Exoc6bA6H5Z3 810 aa13.95□□□□□ -0.18
Vps54-202ENSMUST00000109578 Ubr1O70481 1757 aa13.94□□□□□ -0.18
Vps54-202ENSMUST00000109578 St18Q80TY4 1045 aa13.94□□□□□ -0.18
Vps54-202ENSMUST00000109578 Rnf123Q5XPI3 1314 aa13.94□□□□□ -0.18
Vps54-202ENSMUST00000109578 Stk36Q69ZM6 1316 aa13.94□□□□□ -0.18
Vps54-202ENSMUST00000109578 Pnpla7A2AJ88 1352 aa13.94□□□□□ -0.18
Vps54-202ENSMUST00000109578 Ier5O89113 308 aa13.94□□□□□ -0.18
Vps54-202ENSMUST00000109578 E4f1Q8CCE9 783 aa13.94□□□□□ -0.18
Vps54-202ENSMUST00000109578 NalcnQ8BXR5 1738 aa13.94□□□□□ -0.18
Vps54-202ENSMUST00000109578 Bcl2l13P59017 434 aa13.94□□□□□ -0.18
Vps54-202ENSMUST00000109578 Arhgef1Q61210 920 aaKnown RBP13.94□□□□□ -0.18
Vps54-202ENSMUST00000109578 Gripap1Q8VD04 806 aa13.94□□□□□ -0.18
Vps54-202ENSMUST00000109578 PtmsQ9D0J8 101 aaKnown RBP13.94□□□□□ -0.18
Vps54-202ENSMUST00000109578 Erbb4Q61527 1308 aa13.93□□□□□ -0.18
Vps54-202ENSMUST00000109578 Taok2Q6ZQ29 1240 aa13.93□□□□□ -0.18
Vps54-202ENSMUST00000109578 Naa30Q8CES0 364 aa13.93□□□□□ -0.18
Vps54-202ENSMUST00000109578 Rreb1Q3UH06 1700 aaKnown RBP13.93□□□□□ -0.18
Vps54-202ENSMUST00000109578 Zscan25B2RX31 543 aa13.93□□□□□ -0.18
Vps54-202ENSMUST00000109578 Elmsan1E9Q2I4 1089 aaKnown RBP13.93□□□□□ -0.18
Vps54-202ENSMUST00000109578 Fkbp4P30416 458 aa13.93□□□□□ -0.18
Vps54-202ENSMUST00000109578 F2rP30558 430 aa13.93□□□□□ -0.18
Vps54-202ENSMUST00000109578 Zbtb45Q52KG4 520 aa13.93□□□□□ -0.18
Vps54-202ENSMUST00000109578 Abcc10Q8R4P9 1501 aa13.92□□□□□ -0.18
Vps54-202ENSMUST00000109578 Kif4P33174 1231 aa13.92□□□□□ -0.18
Vps54-202ENSMUST00000109578 Pof1bQ8K4L4 587 aa13.92□□□□□ -0.18
Vps54-202ENSMUST00000109578 Rbm10Q99KG3 930 aaKnown RBP13.92□□□□□ -0.18
Vps54-202ENSMUST00000109578 Rcan3Q9JKK0 239 aa13.92□□□□□ -0.18
Vps54-202ENSMUST00000109578 Slit2Q9R1B9 1521 aa13.92□□□□□ -0.18
Vps54-202ENSMUST00000109578 Chd2E9PZM4 1827 aaKnown RBP13.92□□□□□ -0.18
Vps54-202ENSMUST00000109578 Cfdp1O88271 295 aaKnown RBP13.92□□□□□ -0.18
Vps54-202ENSMUST00000109578 Ms4a2P20490 235 aa13.91□□□□□ -0.18
Vps54-202ENSMUST00000109578 EspnlQ3UYR4 1005 aa13.91□□□□□ -0.18
Vps54-202ENSMUST00000109578 ScaperF8VQ70 1398 aaKnown RBP13.91□□□□□ -0.18
Vps54-202ENSMUST00000109578 Anapc15P60007 132 aa13.91□□□□□ -0.18
Vps54-202ENSMUST00000109578 Col16a1Q8BLX7 1580 aa13.91□□□□□ -0.18
Vps54-202ENSMUST00000109578 Nkx2-3P97334 362 aa13.91□□□□□ -0.18
Vps54-202ENSMUST00000109578 Utp18Q5SSI6 552 aaKnown RBP13.91□□□□□ -0.18
Vps54-202ENSMUST00000109578 Tmem94Q7TSH8 1360 aa13.91□□□□□ -0.18
Vps54-202ENSMUST00000109578 Pdia4P08003 638 aaKnown RBP13.9□□□□□ -0.18
Vps54-202ENSMUST00000109578 Atp6v1dP57746 247 aa13.9□□□□□ -0.18
Vps54-202ENSMUST00000109578 Babam1Q3UI43 333 aa13.9□□□□□ -0.18
Vps54-202ENSMUST00000109578 CoilQ5SU73 570 aa13.9□□□□□ -0.18
Vps54-202ENSMUST00000109578 KinQ8K339 391 aa13.9□□□□□ -0.18
Vps54-202ENSMUST00000109578 Chd1lQ9CXF7 900 aa13.9□□□□□ -0.18
Vps54-202ENSMUST00000109578 Clcn1Q64347 994 aa13.9□□□□□ -0.19
Vps54-202ENSMUST00000109578 Mphosph10Q810V0 681 aaKnown RBP13.9□□□□□ -0.19
Vps54-202ENSMUST00000109578 Fez1Q8K0X8 392 aa13.9□□□□□ -0.19
Vps54-202ENSMUST00000109578 DmtnQ9WV69 405 aa13.89□□□□□ -0.19
Vps54-202ENSMUST00000109578 Fyb1O35601 819 aa13.89□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms