RNA–Protein interactions for RNA: ENSMUST00000108856.8

Col20a1-201, Transcript of Collagen alpha-1(XX) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col20a1, Length 4,489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1-201ENSMUST00000108856 Ccdc173A0JLY1 547 aa13.32□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Tpm3P21107 285 aaKnown RBP13.32□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Btbd11Q6GQW0 1109 aa13.32□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Xrn1P97789 1719 aaKnown RBP13.32□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Hs1bp3Q3TC93 395 aa13.32□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Cadps2Q8BYR5 1297 aa13.32□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Smarca5Q91ZW3 1051 aaKnown RBP13.32□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Fam135bQ9DAI6 1403 aa13.32□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Drc7Q6V3W6 876 aa13.32□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Rec8Q8C5S7 591 aa13.32□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Nol8Q3UHX0 1147 aaKnown RBP13.31□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Srek1Q8BZX4 494 aaKnown RBP13.31□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Ttc5Q99LG4 440 aa13.31□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Hook1Q8BIL5 728 aa13.31□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Myo5cE9Q1F5 1742 aa13.31□□□□□ -0.28
Col20a1-201ENSMUST00000108856 MycnP03966 462 aaKnown RBP13.31□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Hoxb7P09024 217 aa13.31□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Gabpb2P81069 414 aa13.3□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Tmem132eQ6IEE6 982 aa13.3□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Ipo4Q8VI75 1082 aa13.3□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Krt82Q99M74 516 aa13.3□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Exoc6bA6H5Z3 810 aa13.3□□□□□ -0.28
Col20a1-201ENSMUST00000108856 CrcpO35427 148 aa13.3□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Mcm4P49717 862 aa13.3□□□□□ -0.28
Col20a1-201ENSMUST00000108856 P2rx7Q9Z1M0 595 aa13.3□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Psma5Q9Z2U1 241 aaKnown RBP13.3□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Ankrd50F7BE84 1390 aa13.3□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Pde4dQ01063 747 aa13.3□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Cnnm3Q32NY4 713 aa13.3□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Znf692Q3U381 531 aa13.3□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Paxip1Q6NZQ4 1056 aa13.3□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Rbm10Q99KG3 930 aaKnown RBP13.3□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Nsfl1cQ9CZ44 370 aaKnown RBP13.3□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Prex1Q69ZK0 1650 aa13.29□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Gpatch3Q8BIY1 525 aa13.29□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Rsph6aQ8CDR2 708 aa13.29□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Txnrd1Q9JMH6 613 aa13.29□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Abca9Q8K449 1623 aa13.29□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Isy1Q69ZQ2 285 aaKnown RBP13.29□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Ttc19Q8CC21 365 aa13.29□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Nlrp3Q8R4B8 1033 aa13.29□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Jdp2P97875 163 aa13.29□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Olfml1Q8BSH2 233 aa13.29□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Prkar2bP31324 416 aa13.28□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Taf3Q5HZG4 932 aa13.28□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Dnajc10Q9DC23 793 aa13.28□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Knl1Q66JQ7 1612 aa13.28□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Trim34bJ3QNR8 485 aa13.28□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Ankib1Q6ZPS6 1085 aa13.28□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Hmgn5Q9JL35 406 aa13.28□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Abca17E9PX95 1733 aa13.28□□□□□ -0.28
Col20a1-201ENSMUST00000108856 EzrP26040 586 aaKnown RBP13.28□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Aplp1Q03157 653 aa13.28□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Cpa2Q504N0 417 aa13.28□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Ncbp3Q8BZR9 615 aaKnown RBP13.28□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Rlbp1Q9Z275 317 aa13.28□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Wwc1Q5SXA9 1104 aa13.27□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Ptpdc1Q6NZK8 747 aa13.27□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Evc2Q8K1G2 1220 aa13.27□□□□□ -0.28
Col20a1-201ENSMUST00000108856 Phlpp2Q8BXA7 1320 aa13.27□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Cfap99A0A140LIX9 648 aa13.27□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Ccdc155Q80VJ8 648 aa13.27□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Ttc21aQ8C0S4 1314 aa13.27□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Arhgap23Q69ZH9 1483 aa13.26□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Dip2cE9PWR4 1557 aa13.26□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Smarcc1P97496 1104 aa13.26□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Psrc1Q9D0P7 329 aa13.26□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Ankrd44B2RXR6 993 aa13.26□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Rrp9Q91WM3 475 aaKnown RBP13.26□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Klhdc4Q921I2 584 aa13.26□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Ccdc85cE9Q6B2 420 aa13.26□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Fez1Q8K0X8 392 aa13.26□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Syce3B5KM66 88 aa13.25□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Tmc1Q8R4P5 757 aa13.25□□□□□ -0.29
Col20a1-201ENSMUST00000108856 NaspQ99MD9 773 aaKnown RBP13.25□□□□□ -0.29
Col20a1-201ENSMUST00000108856 PdcQ9QW08 244 aa13.25□□□□□ -0.29
Col20a1-201ENSMUST00000108856 InhbeO08717 350 aa13.25□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Vamp4O70480 141 aa13.25□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Me1P06801 572 aa13.25□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Ubxn4Q8VCH8 506 aa13.25□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Cdc42bpgQ80UW5 1551 aa13.25□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Ak9G3UYQ4 1894 aa13.25□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Eif4a2P10630 407 aa13.25□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Ddx17Q501J6 650 aaKnown RBP13.25□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Slf2Q6P9P0 1278 aa13.25□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Eno4Q8C042 619 aa13.25□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Pm20d1Q8C165 503 aa13.25□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Top1mtQ8R4U6 593 aa13.25□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Ccnl1Q52KE7 532 aaKnown RBP13.25□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Tpm1P58771 284 aa13.24□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Plekhg1F6S200 1446 aa13.24□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Nkx1-2P42580 305 aa13.24□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Arhgef1Q61210 920 aaKnown RBP13.24□□□□□ -0.29
Col20a1-201ENSMUST00000108856 A0A0U1RNP2 1173 aa13.23□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Tbc1d9Q3UYK3 1264 aa13.23□□□□□ -0.29
Col20a1-201ENSMUST00000108856 EappQ5BU09 281 aa13.23□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Trim28Q62318 834 aa13.23□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Ccp110Q7TSH4 1004 aa13.23□□□□□ -0.29
Col20a1-201ENSMUST00000108856 AU019823E9PUQ3 292 aa13.23□□□□□ -0.29
Col20a1-201ENSMUST00000108856 Tpm2P58774 284 aa13.23□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 9.5 ms