RNA–Protein interactions for RNA: ENSMUST00000108856.8

Col20a1-201, Transcript of Collagen alpha-1(XX) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col20a1, Length 4,489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1-201ENSMUST00000108856 Rhox8Q6VSS7 320 aa20.09■□□□□ 0.81
Col20a1-201ENSMUST00000108856 NischQ80TM9 1593 aa19.62■□□□□ 0.73
Col20a1-201ENSMUST00000108856 Abcc9P70170 1546 aa18.79■□□□□ 0.6
Col20a1-201ENSMUST00000108856 Gm35339A0A140LHH9 1649 aa18.53■□□□□ 0.56
Col20a1-201ENSMUST00000108856 Abcc8B2RUS7 1588 aa18.39■□□□□ 0.53
Col20a1-201ENSMUST00000108856 Ehmt2Q9Z148 1263 aaKnown RBP18.14■□□□□ 0.49
Col20a1-201ENSMUST00000108856 Esf1Q3V1V3 845 aaKnown RBP18.11■□□□□ 0.49
Col20a1-201ENSMUST00000108856 Rpgrip1Q9EPQ2 1331 aa18.04■□□□□ 0.48
Col20a1-201ENSMUST00000108856 Ccdc136Q3TVA9 1136 aa18.02■□□□□ 0.47
Col20a1-201ENSMUST00000108856 Rtl1Q7M732 1744 aa17.91■□□□□ 0.46
Col20a1-201ENSMUST00000108856 Ccdc180J3QNE4 1664 aa17.78■□□□□ 0.44
Col20a1-201ENSMUST00000108856 Cngb1E1AZ71 1325 aa17.75■□□□□ 0.43
Col20a1-201ENSMUST00000108856 Zeb1Q64318 1117 aa17.61■□□□□ 0.41
Col20a1-201ENSMUST00000108856 Trim41Q5NCC3 630 aa17.58■□□□□ 0.41
Col20a1-201ENSMUST00000108856 Gab3Q8BSM5 595 aa17.39■□□□□ 0.37
Col20a1-201ENSMUST00000108856 Npm2Q80W85 207 aa17.36■□□□□ 0.37
Col20a1-201ENSMUST00000108856 HrcG5E8J6 738 aa17.26■□□□□ 0.35
Col20a1-201ENSMUST00000108856 Il27Q8K3I6 234 aa17.25■□□□□ 0.35
Col20a1-201ENSMUST00000108856 Zcchc6Q5BLK4 1491 aaKnown RBP17.23■□□□□ 0.35
Col20a1-201ENSMUST00000108856 Rb1cc1Q9ESK9 1588 aa17.22■□□□□ 0.35
Col20a1-201ENSMUST00000108856 Wdr66E9Q743 1299 aa17.21■□□□□ 0.35
Col20a1-201ENSMUST00000108856 Myt1lP97500 1187 aa17.12■□□□□ 0.33
Col20a1-201ENSMUST00000108856 Las1lA2BE28 776 aaKnown RBP17.1■□□□□ 0.33
Col20a1-201ENSMUST00000108856 Acin1Q9JIX8 1338 aaKnown RBP17.09■□□□□ 0.33
Col20a1-201ENSMUST00000108856 Dcaf1Q80TR8 1506 aa17.07■□□□□ 0.32
Col20a1-201ENSMUST00000108856 Ube2uB1AUC4 352 aa17.01■□□□□ 0.31
Col20a1-201ENSMUST00000108856 NacadQ5SWP3 1504 aa16.97■□□□□ 0.31
Col20a1-201ENSMUST00000108856 Baz1aO88379 1555 aa16.94■□□□□ 0.3
Col20a1-201ENSMUST00000108856 Kdm5dQ62240 1548 aa16.92■□□□□ 0.3
Col20a1-201ENSMUST00000108856 ScribQ80U72 1612 aa16.87■□□□□ 0.29
Col20a1-201ENSMUST00000108856 Npm1Q61937 292 aaKnown RBP16.77■□□□□ 0.28
Col20a1-201ENSMUST00000108856 UbtfP25976 765 aaKnown RBP16.76■□□□□ 0.27
Col20a1-201ENSMUST00000108856 NefmP08553 848 aa16.68■□□□□ 0.26
Col20a1-201ENSMUST00000108856 Pcgf6Q99NA9 353 aa16.64■□□□□ 0.25
Col20a1-201ENSMUST00000108856 Brd4Q9ESU6 1400 aaKnown RBP16.62■□□□□ 0.25
Col20a1-201ENSMUST00000108856 Ubl4bQ9CQ84 188 aa16.57■□□□□ 0.24
Col20a1-201ENSMUST00000108856 Cep164Q5DU05 1446 aa16.56■□□□□ 0.24
Col20a1-201ENSMUST00000108856 Chic1Q8CBW7 227 aa16.47■□□□□ 0.23
Col20a1-201ENSMUST00000108856 Crybg2B7ZCC2 1516 aa16.46■□□□□ 0.22
Col20a1-201ENSMUST00000108856 Sycp2Q9CUU3 1500 aa16.44■□□□□ 0.22
Col20a1-201ENSMUST00000108856 Ifnlr1Q8CGK5 535 aa16.43■□□□□ 0.22
Col20a1-201ENSMUST00000108856 Pelp1Q9DBD5 1123 aaKnown RBP16.37■□□□□ 0.21
Col20a1-201ENSMUST00000108856 Supt5hO55201 1082 aaKnown RBP16.37■□□□□ 0.21
Col20a1-201ENSMUST00000108856 Smarca2Q6DIC0 1577 aa16.37■□□□□ 0.21
Col20a1-201ENSMUST00000108856 CenpbP27790 599 aa16.36■□□□□ 0.21
Col20a1-201ENSMUST00000108856 Ppargc1bQ8VHJ7 1014 aa16.35■□□□□ 0.21
Col20a1-201ENSMUST00000108856 Ap3b1Q9Z1T1 1105 aa16.34■□□□□ 0.21
Col20a1-201ENSMUST00000108856 Ttbk1Q6PCN3 1308 aa16.32■□□□□ 0.2
Col20a1-201ENSMUST00000108856 Slc24a1Q91WD8 1130 aa16.29■□□□□ 0.2
Col20a1-201ENSMUST00000108856 Cdk11bP24788 784 aaKnown RBP16.29■□□□□ 0.2
Col20a1-201ENSMUST00000108856 Golga3P55937 1487 aa16.28■□□□□ 0.2
Col20a1-201ENSMUST00000108856 Plppr3Q7TPB0 716 aa16.23■□□□□ 0.19
Col20a1-201ENSMUST00000108856 Rsf1E9PWW9 1441 aaKnown RBP16.22■□□□□ 0.19
Col20a1-201ENSMUST00000108856 Fkbp15Q6P9Q6 1216 aaKnown RBP16.18■□□□□ 0.18
Col20a1-201ENSMUST00000108856 Nop58Q6DFW4 536 aaKnown RBP16.17■□□□□ 0.18
Col20a1-201ENSMUST00000108856 Cecr2E9Q2Z1 1453 aa16.17■□□□□ 0.18
Col20a1-201ENSMUST00000108856 Mier1Q5UAK0 511 aa16.17■□□□□ 0.18
Col20a1-201ENSMUST00000108856 Stra8P70278 393 aa16.14■□□□□ 0.17
Col20a1-201ENSMUST00000108856 Fam50aQ9WV03 339 aaKnown RBP16.14■□□□□ 0.17
Col20a1-201ENSMUST00000108856 Ccdc88bQ4QRL3 1481 aa16.08■□□□□ 0.16
Col20a1-201ENSMUST00000108856 Gm13697A2AK42 830 aa16.04■□□□□ 0.16
Col20a1-201ENSMUST00000108856 Ercc6F8VPZ5 1481 aa16.03■□□□□ 0.16
Col20a1-201ENSMUST00000108856 NclP09405 707 aaKnown RBP16.03■□□□□ 0.16
Col20a1-201ENSMUST00000108856 Synj1Q8CHC4 1574 aa16.02■□□□□ 0.16
Col20a1-201ENSMUST00000108856 CftrP26361 1476 aa16.02■□□□□ 0.16
Col20a1-201ENSMUST00000108856 TonslQ6NZL6 1363 aa16■□□□□ 0.15
Col20a1-201ENSMUST00000108856 Lmod2Q3UHZ5 550 aa16■□□□□ 0.15
Col20a1-201ENSMUST00000108856 Zbtb7cQ8VCZ7 619 aa16■□□□□ 0.15
Col20a1-201ENSMUST00000108856 Neurod1Q60867 357 aa15.99■□□□□ 0.15
Col20a1-201ENSMUST00000108856 Os9Q8K2C7 672 aa15.93■□□□□ 0.14
Col20a1-201ENSMUST00000108856 Plekhg3Q4VAC9 1341 aa15.92■□□□□ 0.14
Col20a1-201ENSMUST00000108856 Hnrnpul2Q00PI9 745 aaKnown RBP15.92■□□□□ 0.14
Col20a1-201ENSMUST00000108856 Kif15Q6P9L6 1387 aa15.89■□□□□ 0.13
Col20a1-201ENSMUST00000108856 Pds5bQ4VA53 1446 aaKnown RBP15.87■□□□□ 0.13
Col20a1-201ENSMUST00000108856 Clip1Q922J3 1391 aa15.87■□□□□ 0.13
Col20a1-201ENSMUST00000108856 Tnnt3Q9QZ47 272 aa15.84■□□□□ 0.13
Col20a1-201ENSMUST00000108856 Smarca4Q3TKT4 1613 aaKnown RBP15.84■□□□□ 0.13
Col20a1-201ENSMUST00000108856 Cttnbp2B9EJA2 1648 aa15.83■□□□□ 0.12
Col20a1-201ENSMUST00000108856 NrdcQ8BHG1 1161 aa15.82■□□□□ 0.12
Col20a1-201ENSMUST00000108856 Eif5bQ05D44 1216 aaKnown RBP15.82■□□□□ 0.12
Col20a1-201ENSMUST00000108856 Fmn1Q05860 1466 aa15.82■□□□□ 0.12
Col20a1-201ENSMUST00000108856 Sall2Q9QX96 1004 aa15.8■□□□□ 0.12
Col20a1-201ENSMUST00000108856 BicraF8VPZ9 1578 aa15.79■□□□□ 0.12
Col20a1-201ENSMUST00000108856 Amer1Q7TS75 1132 aa15.79■□□□□ 0.12
Col20a1-201ENSMUST00000108856 ClspnQ80YR7 1315 aa15.76■□□□□ 0.11
Col20a1-201ENSMUST00000108856 Eid3Q3V124 375 aa15.76■□□□□ 0.11
Col20a1-201ENSMUST00000108856 Safb2Q80YR5 991 aaKnown RBP15.72■□□□□ 0.11
Col20a1-201ENSMUST00000108856 Mapk8ip2Q9ERE9 830 aa15.72■□□□□ 0.11
Col20a1-201ENSMUST00000108856 Gm13695A2AK44 830 aa15.69■□□□□ 0.1
Col20a1-201ENSMUST00000108856 Atad2bE9Q166 1460 aaKnown RBP15.69■□□□□ 0.1
Col20a1-201ENSMUST00000108856 Cep162Q6ZQ06 1403 aa15.68■□□□□ 0.1
Col20a1-201ENSMUST00000108856 Atp1b4Q99ME6 356 aa15.64■□□□□ 0.1
Col20a1-201ENSMUST00000108856 Anp32bQ9EST5 272 aaKnown RBP15.64■□□□□ 0.1
Col20a1-201ENSMUST00000108856 Erich6D3Z6S9 713 aa15.64■□□□□ 0.09
Col20a1-201ENSMUST00000108856 Iqgap2Q3UQ44 1575 aa15.63■□□□□ 0.09
Col20a1-201ENSMUST00000108856 Myt1Q8CFC2 1127 aa15.62■□□□□ 0.09
Col20a1-201ENSMUST00000108856 Gm38655A0A286YDK6 273 aa15.62■□□□□ 0.09
Col20a1-201ENSMUST00000108856 Ccdc18Q640L5 1455 aa15.6■□□□□ 0.09
Col20a1-201ENSMUST00000108856 Cc2d2aQ8CFW7 1633 aa15.59■□□□□ 0.09
Col20a1-201ENSMUST00000108856 Setd5Q5XJV7 1441 aa15.59■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 47.1 ms