RNA–Protein interactions for RNA: ENSMUST00000065997.4

Aplf-202, Transcript of Aprataxin and PNK-like factor, mousemouse

TSL 1 (best) BASIC

Gene Aplf, Length 3,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Aplf-202ENSMUST00000065997 FanclQ9CR14 375 aa11.95□□□□□ -0.5
Aplf-202ENSMUST00000065997 Smarca5Q91ZW3 1051 aaKnown RBP11.95□□□□□ -0.5
Aplf-202ENSMUST00000065997 Vamp4O70480 141 aa11.95□□□□□ -0.5
Aplf-202ENSMUST00000065997 Gadd45bP22339 160 aa11.95□□□□□ -0.5
Aplf-202ENSMUST00000065997 Arhgef1Q61210 920 aaKnown RBP11.94□□□□□ -0.5
Aplf-202ENSMUST00000065997 Pdcl2Q78Y63 240 aa11.94□□□□□ -0.5
Aplf-202ENSMUST00000065997 Ncbp3Q8BZR9 615 aaKnown RBP11.94□□□□□ -0.5
Aplf-202ENSMUST00000065997 Ciz1Q8VEH2 845 aa11.94□□□□□ -0.5
Aplf-202ENSMUST00000065997 Rcan3Q9JKK0 239 aa11.94□□□□□ -0.5
Aplf-202ENSMUST00000065997 Nom1Q3UFM5 854 aaKnown RBP11.93□□□□□ -0.5
Aplf-202ENSMUST00000065997 Cypt2Q6P924 180 aa11.93□□□□□ -0.5
Aplf-202ENSMUST00000065997 Col22a1E9Q7P1 1613 aa11.93□□□□□ -0.5
Aplf-202ENSMUST00000065997 Pnma3Q8JZW8 466 aa11.93□□□□□ -0.5
Aplf-202ENSMUST00000065997 CenppQ9CZ92 286 aa11.93□□□□□ -0.5
Aplf-202ENSMUST00000065997 Lrp6O88572 1613 aa11.93□□□□□ -0.5
Aplf-202ENSMUST00000065997 1700019A02RikA0A087WPV9 146 aa11.93□□□□□ -0.5
Aplf-202ENSMUST00000065997 Zscan25B2RX31 543 aa11.93□□□□□ -0.5
Aplf-202ENSMUST00000065997 Gimap6Q8K349 305 aa11.93□□□□□ -0.5
Aplf-202ENSMUST00000065997 Gys2Q8VCB3 704 aa11.93□□□□□ -0.5
Aplf-202ENSMUST00000065997 Ppp6r3Q922D4 844 aa11.93□□□□□ -0.5
Aplf-202ENSMUST00000065997 Lmod3E9QA62 571 aa11.92□□□□□ -0.5
Aplf-202ENSMUST00000065997 Birc3O08863 600 aa11.92□□□□□ -0.5
Aplf-202ENSMUST00000065997 Pdia3P27773 505 aaKnown RBP11.92□□□□□ -0.5
Aplf-202ENSMUST00000065997 HdgfP51859 237 aaKnown RBP11.92□□□□□ -0.5
Aplf-202ENSMUST00000065997 Zdhhc9P59268 364 aa11.92□□□□□ -0.5
Aplf-202ENSMUST00000065997 Cgnl1Q6AW69 1298 aa11.92□□□□□ -0.5
Aplf-202ENSMUST00000065997 Usp16Q99LG0 825 aa11.92□□□□□ -0.5
Aplf-202ENSMUST00000065997 Chmp4bQ9D8B3 224 aaKnown RBP11.92□□□□□ -0.5
Aplf-202ENSMUST00000065997 CalcaP70160 136 aa11.92□□□□□ -0.5
Aplf-202ENSMUST00000065997 Ggt6Q6PDE7 497 aa11.92□□□□□ -0.5
Aplf-202ENSMUST00000065997 Ric3Q8BPM6 367 aa11.92□□□□□ -0.5
Aplf-202ENSMUST00000065997 Q9D2X8 372 aa11.91□□□□□ -0.5
Aplf-202ENSMUST00000065997 Cyp27a1Q9DBG1 533 aa11.91□□□□□ -0.5
Aplf-202ENSMUST00000065997 TimelessQ9R1X4 1197 aa11.91□□□□□ -0.5
Aplf-202ENSMUST00000065997 Fyb1O35601 819 aa11.91□□□□□ -0.5
Aplf-202ENSMUST00000065997 HnrnpuQ8VEK3 800 aaKnown RBP11.91□□□□□ -0.5
Aplf-202ENSMUST00000065997 Tet3Q8BG87 1668 aa11.91□□□□□ -0.5
Aplf-202ENSMUST00000065997 Mdc1Q5PSV9 1707 aa11.91□□□□□ -0.5
Aplf-202ENSMUST00000065997 Nucb1Q02819 459 aaKnown RBP11.91□□□□□ -0.5
Aplf-202ENSMUST00000065997 Gripap1Q8VD04 806 aa11.91□□□□□ -0.5
Aplf-202ENSMUST00000065997 Dhx30Q99PU8 1217 aaKnown RBP11.91□□□□□ -0.5
Aplf-202ENSMUST00000065997 PaskQ8CEE6 1383 aa11.9□□□□□ -0.5
Aplf-202ENSMUST00000065997 Anapc15-psA0A140T8L6 141 aa11.9□□□□□ -0.5
Aplf-202ENSMUST00000065997 Sox12Q04890 314 aa11.9□□□□□ -0.5
Aplf-202ENSMUST00000065997 Klhdc4Q921I2 584 aa11.9□□□□□ -0.5
Aplf-202ENSMUST00000065997 Col16a1Q8BLX7 1580 aa11.9□□□□□ -0.5
Aplf-202ENSMUST00000065997 Cpa2Q504N0 417 aa11.9□□□□□ -0.5
Aplf-202ENSMUST00000065997 Fbxo2Q80UW2 297 aa11.9□□□□□ -0.5
Aplf-202ENSMUST00000065997 MypopQ8R4U1 393 aa11.9□□□□□ -0.5
Aplf-202ENSMUST00000065997 Tnnt2P50752 301 aa11.89□□□□□ -0.51
Aplf-202ENSMUST00000065997 Map3k19E9Q3S4 1311 aa11.89□□□□□ -0.51
Aplf-202ENSMUST00000065997 Nfat5Q9WV30 1534 aa11.89□□□□□ -0.51
Aplf-202ENSMUST00000065997 InhbeO08717 350 aa11.89□□□□□ -0.51
Aplf-202ENSMUST00000065997 Mcm10Q0VBD2 885 aa11.89□□□□□ -0.51
Aplf-202ENSMUST00000065997 Chd1lQ9CXF7 900 aa11.89□□□□□ -0.51
Aplf-202ENSMUST00000065997 Kif4P33174 1231 aa11.89□□□□□ -0.51
Aplf-202ENSMUST00000065997 Mindy4Q3UQI9 744 aa11.89□□□□□ -0.51
Aplf-202ENSMUST00000065997 Ncoa4Q5U4H9 625 aa11.89□□□□□ -0.51
Aplf-202ENSMUST00000065997 Nol12Q8BG17 217 aa11.89□□□□□ -0.51
Aplf-202ENSMUST00000065997 ScaperF8VQ70 1398 aaKnown RBP11.88□□□□□ -0.51
Aplf-202ENSMUST00000065997 Gnai1B2RSH2 354 aa11.88□□□□□ -0.51
Aplf-202ENSMUST00000065997 Cc2d1aQ8K1A6 943 aa11.88□□□□□ -0.51
Aplf-202ENSMUST00000065997 Gnai3Q9DC51 354 aa11.88□□□□□ -0.51
Aplf-202ENSMUST00000065997 Phactr2B1AVP0 632 aa11.88□□□□□ -0.51
Aplf-202ENSMUST00000065997 Pibf1E9Q6K3 756 aa11.88□□□□□ -0.51
Aplf-202ENSMUST00000065997 Aifm3Q3TY86 605 aa11.88□□□□□ -0.51
Aplf-202ENSMUST00000065997 Ddx17Q501J6 650 aaKnown RBP11.88□□□□□ -0.51
Aplf-202ENSMUST00000065997 Dixdc1Q80Y83 711 aa11.88□□□□□ -0.51
Aplf-202ENSMUST00000065997 Gcc1Q9D4H2 778 aa11.88□□□□□ -0.51
Aplf-202ENSMUST00000065997 Cabp2Q9JLK4 216 aa11.88□□□□□ -0.51
Aplf-202ENSMUST00000065997 Aldh8a1Q8BH00 487 aa11.87□□□□□ -0.51
Aplf-202ENSMUST00000065997 Fam13aQ8BGI4 693 aa11.87□□□□□ -0.51
Aplf-202ENSMUST00000065997 Olfml1Q8BSH2 233 aa11.87□□□□□ -0.51
Aplf-202ENSMUST00000065997 Lekr1B2RVN1 116 aa11.86□□□□□ -0.51
Aplf-202ENSMUST00000065997 Fchsd2Q3USJ8 740 aa11.86□□□□□ -0.51
Aplf-202ENSMUST00000065997 Shank2Q80Z38 1476 aa11.86□□□□□ -0.51
Aplf-202ENSMUST00000065997 Uhrf1bp1B2KF50 1429 aa11.86□□□□□ -0.51
Aplf-202ENSMUST00000065997 Cdhr2E9Q7P9 1308 aa11.86□□□□□ -0.51
Aplf-202ENSMUST00000065997 Zkscan16A2ALW2 728 aa11.86□□□□□ -0.51
Aplf-202ENSMUST00000065997 NcapgE9PWG6 1004 aa11.86□□□□□ -0.51
Aplf-202ENSMUST00000065997 NexnQ7TPW1 607 aa11.86□□□□□ -0.51
Aplf-202ENSMUST00000065997 Kdm4aQ8BW72 1064 aa11.86□□□□□ -0.51
Aplf-202ENSMUST00000065997 E4f1Q8CCE9 783 aa11.86□□□□□ -0.51
Aplf-202ENSMUST00000065997 PtmsQ9D0J8 101 aaKnown RBP11.86□□□□□ -0.51
Aplf-202ENSMUST00000065997 MsnP26041 577 aaKnown RBP11.85□□□□□ -0.51
Aplf-202ENSMUST00000065997 Fam13bQ8K2H3 851 aa11.85□□□□□ -0.51
Aplf-202ENSMUST00000065997 Astn2Q80Z10 1352 aa11.85□□□□□ -0.51
Aplf-202ENSMUST00000065997 Nid2O88322 1403 aa11.85□□□□□ -0.51
Aplf-202ENSMUST00000065997 Znf316Q6PGE4 1016 aa11.84□□□□□ -0.51
Aplf-202ENSMUST00000065997 Erc2Q6PH08 957 aa11.84□□□□□ -0.51
Aplf-202ENSMUST00000065997 Rab11fip3Q8CHD8 1047 aa11.84□□□□□ -0.51
Aplf-202ENSMUST00000065997 Cyp46a1Q9WVK8 500 aa11.84□□□□□ -0.51
Aplf-202ENSMUST00000065997 Frmpd2A0A140LI67 1392 aa11.84□□□□□ -0.51
Aplf-202ENSMUST00000065997 Mcm2P97310 904 aa11.84□□□□□ -0.51
Aplf-202ENSMUST00000065997 Dmrt2Q8BG36 561 aa11.84□□□□□ -0.51
Aplf-202ENSMUST00000065997 Bcar3Q9QZK2 820 aa11.84□□□□□ -0.51
Aplf-202ENSMUST00000065997 Sytl4Q9R0Q1 673 aa11.84□□□□□ -0.51
Aplf-202ENSMUST00000065997 Elp1Q7TT37 1333 aaKnown RBP11.83□□□□□ -0.52
Aplf-202ENSMUST00000065997 Prkar2bP31324 416 aa11.83□□□□□ -0.52
Aplf-202ENSMUST00000065997 Prune1Q8BIW1 454 aa11.83□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms